G83942


Basic Information

Item Value
gene id G83942
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 11011298 ~ 11012402 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU113035
CCTCATTCAAAAGAAAGTGTTACGGTCAAATCTGGAGTAACTTCTTGATCTGTGAAATCATTATTTGTTCCAGTTattccttaaaggtccaatgtgtaggaatttctcccatctagcgttgagatcatatatcgcaatcaactctctcgcgccacgcagttcaaagtacgtattacagctacggtagccttcacttCATGtttggtcctccatgtttccttcttcaaacttgccagggccaggaagctacgatacccattagcagcattagcagcacctgtgagtttatcatgtgacagcgaaaacgcaaaagacggagcagtatgtcctgtatgtctcttactggctaacgtatttcaagatggcgcatgattatggagcgtctaccccagttcatgcaaatgcaaatgtaaaatttcaagcaaataggaatacttggaattgatggtggaggtaaatattcatgaaaaaggacaagtttgtgaacgggcaacacagattttgaaaatgaagaactaaacacgttacacactggacctttaataatCAGTAAAGAAGATATTTTTTATTACATCTTGTATTGTTGATGCACcgaaacattttttattttctagggGCAagttagaataaaaaaaaatgaagcagCACCACTGACATTACCAGGTTTTCTGTCTCTTGAGGTGGAGACCTGaggcacacacaacaaaaatgactaaagagagagagattatacAGACAATTTTGTACTACAGCTGTACTAAAATATTACATATAGCCCTATTAGGATTTTGGTATTAATAATTTGCGGGGAGTCATTGAAGGCTTGTATTgacatcttaaaggtcccatggcatgaaaatttcactttatgaggttttttaacattaatatccGTTCCGCCAggctgtctatggtcccccagtggctagaaatgagaaaatgaaagctcagatgggccgatctggaatcttctccttatgaggtcataaggagcaaggttacctcccctttctctgctttgcacacccagagaatttggcccacccatgagagagagagagacatcatggctttcaaacgagcgaagcatggcagttggtcaaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU113035 True 1105 lncRNA 0.40 1 11011298 11012402

Neighbor

gene id symbol gene type direction distance location
LOC120563889 NA coding downstream 39769 10963692 ~ 10971529 (-)
snx22 snx22,LOC104929545 coding downstream 50205 10949753 ~ 10961093 (-)
adpgk adpgk coding downstream 64516 10935704 ~ 10946782 (-)
ppib ppib coding downstream 76507 10929968 ~ 10934791 (-)
LOC120564602 NA coding downstream 131650 10717165 ~ 10879648 (-)
sv2 LOC103366734,LOC105926231 coding upstream 14901 11027303 ~ 11039772 (-)
ireb2 ireb2 coding upstream 50293 11062695 ~ 11081305 (-)
wdr61 wdr61 coding upstream 88647 11101049 ~ 11110308 (-)
sin3aa sin3a coding upstream 134268 11146670 ~ 11169923 (-)
snupn snupn coding upstream 193052 11205454 ~ 11215493 (-)
G83941 NA non-coding downstream 60 11010862 ~ 11011238 (-)
G83911 NA non-coding downstream 86280 10924503 ~ 10925018 (-)
G83854 NA non-coding downstream 470637 10537831 ~ 10540661 (-)
G83819 NA non-coding downstream 639119 10368773 ~ 10372179 (-)
G83786 pdia3,LOC100304813 non-coding downstream 643416 10361594 ~ 10367882 (-)
G83974 NA non-coding upstream 48665 11061067 ~ 11061304 (-)
G84050 NA non-coding upstream 357997 11370399 ~ 11370649 (-)
G84051 NA non-coding upstream 382146 11394548 ~ 11394883 (-)
G84053 NA non-coding upstream 510307 11522709 ~ 11523000 (-)
LOC120563423 NA non-coding upstream 849959 11862361 ~ 11862788 (-)
oaz2a oaz2,LOC104929548,LOC101470759,LOC102200097,LOC106531198 other downstream 98081 10823286 ~ 10913217 (-)
LOC120564603 NA other downstream 296453 10706219 ~ 10714845 (-)
scamp2 LOC103379909,LOC103364404,LOC104932119 other downstream 348620 10643916 ~ 10662678 (-)
G83826 mfge8,LOC104961859 other downstream 579154 10389244 ~ 10432144 (-)
tdg.2 LOC104948407,LOC103366417 other downstream 831297 10174471 ~ 10180001 (-)
ptpn9a ptpn9 other upstream 161151 11173553 ~ 11260961 (-)
G84083 NA other upstream 875625 11888027 ~ 11888398 (-)
G84123 cat,LOC102293651,LOC102204975,LOC102775586,LOC102293936 other upstream 1129121 12141523 ~ 12144546 (-)
G84530 LOC100696427,LOC106963151,LOC107104182,LOC107388919,LOC104956556,LOC102796452,LOC102202152 other upstream 2218215 13230617 ~ 13231095 (-)
prr5a prr5,LOC103371545 other upstream 2234426 13246828 ~ 13256093 (-)

Expression


Co-expression Network