G84120


Basic Information

Item Value
gene id G84120
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 12136841 ~ 12140672 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU113255
TTACtgttgaattgtttttatttcaaacagCATTCACACATTACACTGTATTCTTGAGGCACATTCACATCAAGTGCTAAATAACTTCATGCATTgttgaatgtaggctacagctttGTTAAATTGAATGCAAATGCTGATTGTAAATGAAAATATTGCTTTATTATTTGGCACAGTAGGAAATATTGTCTATTATATGACCACAGGTGTGTTCTTTTTGGATTGATTTTCAACGTGAGGCGAGGAATGCAATCAGAACTTGAACAAAAATGTAGACTAGGTTCTgcttgaataaataaaaatcacaacaaTGCATAAGGCTGATGATGCTTTTAGAGATAGCAGTTATTTCACTTGATAATTCACATTCAAAAGTTACAACAAAACAGGACTATTGCACAATGTTGTAGAGAATATCTCAGACAGATAAAAAGCCACCTTGACATTCTGACTTTTACAAGACCCATGACACATAATCTTCATTTTAACTGTAAAACTTTTTAGCAATATAACCATTCAAGCTGTAAAAGTGGCTCCTATTGGTTTCAACCAGGAACGCCCTCACTGCTAACGAGAAGTTTGCAGGTATCCTGCAGTAATGAGAAAAGCTAAAATGAGTGCGACAAGTGCCTGGTGAAAAACAACTACAGATTAATTCAGAATATCAAGGTGATTCCTCTAAGCAAAATGAACTTTAAACCCATTTAAAGGGGTTAGTATACTTTACATCACAAGTTAAATTCCCAGAGGTGttttaattataattaattGATCAGCAACGGTATTGGTGTTAAATATAGTGTTGTGTAAATTAATTTGGAGTCTGATGTCTATTTAAGTTGTAATACTATGAAAAACATGAGTGTGAAGTTAGAAGAAAACAACATTTACTCTGTTGAATATGCTTATGCAACTTGTATTGCATTAATCATGGTAAAAATAGAACAATAAAACTTGACATTAATATGCTGATTACATCTGATTTGGCCACCCTGTAACAACTGCTACAAATTACAATTATTTCACCTGGATAAGAGTACCTGGATTTTCTTCAAAAGCATAATAAATACTGAACGTACTAAAACCTCTATTATTTGTCAATCTCACTGTTAACAAATTACACAAGCAAATCCATTAGAGTTAACTCAATTCAGCTCTAAAACCGCTACAAAATCAATGAAGAAGGCGCAATCAATGACTGGTTTGAAAAGACAAATTAGTATTTTCCTGAAAAAGAGGCAATTTTACCCAGCCATCCAGTCGGTCATTCTCGAGACAGCTATAACAGGCTACAACCAGAGTAGGCGCCATGCAGAGAGGGGGCTCCGCCTACCTAGGCTCGGTTGCTTTTGTTAATTAAAATTCACATCAAAGTCCAAAATGAAATTTCTGAACAAGACTTTTGAGAAGGGAAAAAGTATCCACATATTCATGTCTCCTCTGCTGTTACTGTGGTGGAGAATTGTGATTCAGCCAGATTCTCGAGCCAACAGCACAAGGTAAAGATATAGAATGCACACCATTTGAAAACTCATCAATTACTTTTAGTGTGAAGTTTGGGATATGCACTGCTCCTTTCTAAATGCCACCCTCACCTATAATGCACCCGAGCCAGAATGAAGCCAAATACTAGAGAAAGGATTTAAGCATATATTTGATCCAGGGATCAATAAAAACACCCTGTTCGGAGTCAAACACTGGCATTTCAGATTCCTCCCCCGTACATGAAGATAAGGTGTTTACTTCAATTTGTTATTCACCAGCAGAGTGACACATACCCCACGCAATATCCATCTGTGGGCCAAAAACTCTTATCTTACTCAAAACAGATTTGAACATGGCACCAAATACTGGGAGAGGTGAAAGGAACGTGAAGAATCGAGTGTTTTACTTGAAACAGgtcgtgtgtgtgagagcaaaGAGGGCTAGATCCTGCGCAGAGGGTGCCACATGGACACAGGCTTCCTCAGAGTGGCCAGCATCTGGTTCCAGTGGGTGATCCCCATCCCGCTGGCCTCTGGGCCAATGATCACGTGGCCCAGGTTCTCGCCCCGGCCGTCATCAGTGGCTTCTGCCACTGTCACCCTCAGGGAGAGTTCCTGCAGACGGCATAACATGATTACACAACCTGCTGAGCAAGCATGACTCGGCATCTTCTTTACAGCGTGGCCTAGTGTGGTGCCACAGTCTAAAGTCTCACCTGCAGGACGATGGACGGCACAGAGAAGATCATAGCTTCATTGAAGATGGGGTTTGTGTCGTCCCTTTTGGTGGAAGTCTTCTTCTTGCTGATCTTCCTGCCATCTTGCAGGAGATAAACTTTGACAAACGGATCTGATAACGACAATGACCGAATGAGATTACGACCCCATTTAAAGCTTCTAGAACCCAAgctatacatacataaacacccACGCACACAGCTTGTAGAGCATGTAATAAACTCCTCATTAAAGAGCAATCAATTAGAAGCACAGGCCTGTACACACTATTAGCTCTGTGGATGATAATGACAGTGTTTCAGTGGGTGACCTTTATTGGTACAATGTTGGCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU113255 True 2554 lncRNA 0.40 2 12136841 12140672

Neighbor

gene id symbol gene type direction distance location
cspg4 cspg4 coding downstream 794472 11265168 ~ 11342369 (-)
snupn snupn coding downstream 921348 11205454 ~ 11215493 (-)
sin3aa sin3a coding downstream 966918 11146670 ~ 11169923 (-)
wdr61 wdr61 coding downstream 1026533 11101049 ~ 11110308 (-)
ireb2 ireb2 coding downstream 1055536 11062695 ~ 11081305 (-)
LOC120564089 NA coding upstream 111912 12252584 ~ 12258264 (-)
kras kras,LOC105900436,LOC103038241,LOC107595236 coding upstream 412811 12553483 ~ 12563371 (-)
bhlhe41 bhlhe41,LOC102793158 coding upstream 444639 12585311 ~ 12587491 (-)
itpr2 itpr2 coding upstream 459709 12600381 ~ 12660168 (-)
eea1 eea1 coding upstream 549021 12689693 ~ 12712352 (-)
G84103 peak1 non-coding downstream 23116 12109186 ~ 12113725 (-)
G84102 peak1,LOC102799369 non-coding downstream 32870 12103163 ~ 12103971 (-)
G84100 peak1 non-coding downstream 40807 12095573 ~ 12096034 (-)
G84098 NA non-coding downstream 78163 12058463 ~ 12058678 (-)
G84094 hmg20a,LOC107103253 non-coding downstream 170010 11963726 ~ 11966831 (-)
G84115 NA non-coding upstream 16578 12157250 ~ 12163020 (-)
G84118 NA non-coding upstream 19707 12160379 ~ 12169647 (-)
G84127 NA non-coding upstream 28996 12169668 ~ 12170195 (-)
G84129 LOC104959604 non-coding upstream 37271 12177943 ~ 12200835 (-)
G84130 NA non-coding upstream 64569 12205241 ~ 12205531 (-)
G84083 NA other downstream 248443 11888027 ~ 11888398 (-)
ptpn9a ptpn9 other downstream 875880 11173553 ~ 11260961 (-)
oaz2a oaz2,LOC104929548,LOC101470759,LOC102200097,LOC106531198 other downstream 1223624 10823286 ~ 10913217 (-)
LOC120564603 NA other downstream 1421996 10706219 ~ 10714845 (-)
scamp2 LOC103379909,LOC103364404,LOC104932119 other downstream 1474163 10643916 ~ 10662678 (-)
G84123 cat,LOC102293651,LOC102204975,LOC102775586,LOC102293936 other upstream 851 12141523 ~ 12144546 (-)
G84530 LOC100696427,LOC106963151,LOC107104182,LOC107388919,LOC104956556,LOC102796452,LOC102202152 other upstream 1089945 13230617 ~ 13231095 (-)
prr5a prr5,LOC103371545 other upstream 1106156 13246828 ~ 13256093 (-)
LOC120564547 fbxl14,LOC103380143,LOC107388938 other upstream 1185301 13325973 ~ 13385205 (-)
mafb maf,LOC104941368,LOC104940469,LOC101071510,LOC101484138,LOC103380135,LOC102219741,LOC106520304 other upstream 1433159 13573831 ~ 13618786 (-)

Expression


Co-expression Network