G84243


Basic Information

Item Value
gene id G84243
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 12687483 ~ 12688635 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU113413
gtgtgtgtgtgtgcgtgtgtgcgtgtgtgtgtgcgcgctttgAAGCAGTGGCTGTGTGTGATATTGCTGTAACAGTGTGCGTTTTTGTGTTAAGGCCTGCTGTGTGTCTCCCGAGATGCACTGTATGAACGTTGGCTGCTCAGAACCCCTCAGTATCTCTCTTGGCGTGTTGTTTGGGGATGTCGGTGCTGCTTTCAGGTGCAGCGGTTGCTGTCGGTTCTCTGTGCAGCTGAGGACACTGTAAAAGTTCATTCctgctttttataatttataacTGTTGACAGATATTGGTTAGATCTTTTGTGCAATTGTCTCAAGACTGGAGGAGGCGAAAACACTGTAAGCCAGGCGACAATGCAGGCTGTTCTGGCATTTGGCAACAAAAGGCTTGTTTCAGACTTCGGCTTACCAAATTAGCTCTTTATGCTTGCTGTATGCTCAAAAAAACAATGTCCATCTCAGTTGCAAGCTCTCAAGAACGCCTGTCTCGTTTAGTGTTGCATTGGTTTTGTTATGTCTACCTCAGATTGGCACAGGAAAAGCACTATTTCTAAACCTGAGAGATCACAGATATTGTGTCATTGCCTGCATTTGATCAATGATTTGTGATTTATCTATCAAGCTGTACAGTCCCTTAAACCCTAGAGAGATGATTTGCACCTTATTGTATTCTGGGCTCGTTTGTATGAGAACCCAGCCACAAACGTATGACCACCAACTTTATACAGGCTTCAGCATTTCTAGCCCTGATGTACTTAACCGCTCATTAATACTAAGGCTGTCATAATTATCTTTGTAAATGTTTGtaatgaaagagaaaaagaaaatgtataaaactTGTGGATGTAGAAACATTAAcagttaaaatgtgtgtgtggactcATCAGTGTcttacttttgttttgttttttttattacaaaaaaggcACCACAGATCTGTACACACTGAATTGTGGCTTGCTTTGTGTTGCTGTCAGTTATCATGCATGATGACTTAACTGGCCCTTAGCGGTGACACGCACCATGTATTACCACAGTCTGGGTGATCTCGGTATACCTGAAGGGACGAGAGAAATTATGTAATTTATGTTCACATGCACCAGTTGATTTTCTAATTCATCATCATGAAAAACCTAAATAAAACCCACTGTAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU113413 True 1153 lncRNA 0.41 1 12687483 12688635

Neighbor

gene id symbol gene type direction distance location
itpr2 itpr2 coding downstream 27315 12600381 ~ 12660168 (-)
bhlhe41 bhlhe41,LOC102793158 coding downstream 99992 12585311 ~ 12587491 (-)
kras kras,LOC105900436,LOC103038241,LOC107595236 coding downstream 124112 12553483 ~ 12563371 (-)
LOC120564089 NA coding downstream 429219 12252584 ~ 12258264 (-)
cspg4 cspg4 coding downstream 1345114 11265168 ~ 11342369 (-)
eea1 eea1 coding upstream 1058 12689693 ~ 12712352 (-)
nudt4a nudt4,LOC100689726,LOC101064765,LOC102791978 coding upstream 23818 12712453 ~ 12727343 (-)
ube2na ube2n coding upstream 41720 12730355 ~ 12736681 (-)
nr1h4 nr1h4 coding upstream 53507 12742142 ~ 12758791 (-)
slc17a8 slc17a8 coding upstream 71997 12760632 ~ 12774255 (-)
G84244 NA non-coding downstream 196 12687034 ~ 12687287 (-)
G84236 NA non-coding downstream 74207 12580603 ~ 12613276 (-)
G84130 NA non-coding downstream 481952 12205241 ~ 12205531 (-)
G84129 LOC104959604 non-coding downstream 486648 12177943 ~ 12200835 (-)
G84127 NA non-coding downstream 517288 12169668 ~ 12170195 (-)
G84294 NA non-coding upstream 141721 12830356 ~ 12834571 (-)
G84320 rfx4 non-coding upstream 197028 12885663 ~ 12885917 (-)
G84321 NA non-coding upstream 197956 12886591 ~ 12886903 (-)
G84324 NA non-coding upstream 203391 12892026 ~ 12893439 (-)
G84326 rfx4 non-coding upstream 208424 12897059 ~ 12898557 (-)
G84123 cat,LOC102293651,LOC102204975,LOC102775586,LOC102293936 other downstream 542937 12141523 ~ 12144546 (-)
G84083 NA other downstream 799085 11888027 ~ 11888398 (-)
ptpn9a ptpn9 other downstream 1426522 11173553 ~ 11260961 (-)
oaz2a oaz2,LOC104929548,LOC101470759,LOC102200097,LOC106531198 other downstream 1774266 10823286 ~ 10913217 (-)
LOC120564603 NA other downstream 1972638 10706219 ~ 10714845 (-)
G84530 LOC100696427,LOC106963151,LOC107104182,LOC107388919,LOC104956556,LOC102796452,LOC102202152 other upstream 541982 13230617 ~ 13231095 (-)
prr5a prr5,LOC103371545 other upstream 558193 13246828 ~ 13256093 (-)
LOC120564547 fbxl14,LOC103380143,LOC107388938 other upstream 637338 13325973 ~ 13385205 (-)
mafb maf,LOC104941368,LOC104940469,LOC101071510,LOC101484138,LOC103380135,LOC102219741,LOC106520304 other upstream 885196 13573831 ~ 13618786 (-)
zgc:77752 NA other upstream 1342469 14031104 ~ 14037716 (-)

Expression


Co-expression Network