G84536


Basic Information

Item Value
gene id G84536
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 13322182 ~ 13325258 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU113825
CGCTGGCCTTCAACCTTGTTAAAGAATATTCACACATTTACATAGTTTACAGTACAAGTAAACTAATGTATCTGTGACTTGTTTGAAGTTTTTTGCAAGAAACCAAGgcttataatttatttatttacatacatacaaaatcCAAATAACTCACAAACATGTctgttttgctttctttttaCACAGTTTGATTTTTAACACGAACAGACAGAAGGCAGTACATTTCTTATACAAGAAAAAAATACCATGAACTTGACAGAAGCCCCTTAATCAGCTCTGTGTTCCTCAAAGAGTCAAGAAAAAGATGAGACATTAAGGCAAGGGCAGGGACACACAGGCCAAAGTAAGGGGAATTGAAACACATTACAAAATGATTTCTCTGAACCCAGTGGTGAAAGGTGAGGGGTTAAAAAGGGACAGAGGGAAATAGATGTCCACTCGGAGAGGTTTGACAgacaagatgtacaaaaacaaGCATCCCAAATAACATCCTCCAAAACCAGCGGTTGTGTATTGTTTTCAAAACACACCGTTAGTCCACCCAAATGTATCTGTAAATTAACCATGCATAGGAAGTTTCTTAGAAAAACTTCATGATGCAGTTTTGTTTTGTAACATTATGTTCCTGTTATGACAGCAGGAGGGCCATGATGATTGGAGACTGACTTTATATCCATCAGGCCCAGTCTGCCTATGACATCaaccaacaaaaaaacgttgacATAACAGGGaagaagaaaagacaacacCGCAATCTCGGGGTAATACATTTACATCACCATTTGGTGAAAGTATATAAAAATGACTATTAGAAATAAATGCAAGAAAAGTACTCTCCCATCACACAGTCACGGTTTGAAAACATTTGTAGTTTATACATTATTTTGACACAAGATTTTTTTGACACTTCTTTCCTCAGTTTCTGCTCATTTTTGTTCAGAGCAGCTCGCTCTTTAAGATTCTGTGCAAACATTCAATGCATATCCATAcagtaaacatttttatatatatatatatgtattatatttatatatagctCTAGAGAACATGACTTTCCGAAAGTTATGGCAgtactgtcacacacacacactttgtcatGAAGACAAAATTAGAGACAAAAGACAACTGCACTGCTTTTAacttttgaggttttttaaaagAATGCACAACACCTTCCACTTAGTTACCTTTATTCAGTCACTGTACGTGTTAAATATCACGTTATTTACAAACCGATCTAAAAAGTCAAAATCTGCTGAAAAGTGACTAATTTCCTGTAAATGTAGATGCAATTATGCAATTAAAAACCTCAGCCctgaagatttaaaaaataaaaaaaaataaaaggaggcATCACTTGCATTGGTAAATACAAGAAAGAGGGGTGTCGCTTGTATTCTTCAGTGATTCCGTCGACAAACTAAAGATCAGGTGGGCTTTAAGTAACATCTATAGAAACTTTGGATGAGACTGAATGATCAGTGGAATCACATAAGTTCTTACATCATGCCTTAGCACCAATATTACAGAGGAATAAATATCCCTGCATTAGGTCCAGTACTGATCTCTGTGCATGCTCCAAGGCCACTAGAACGTTCTGAAAAGAAACATTGCATACCTCATAAACAAGTGGACGTTGAGTGCAAAACCATCTAAAAATGAATACATCACAGAGAATAaaagctttctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctcttctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctcctctctctctctctctctctctctctctctctcgtattTGAGGACATAGTGTAACTAAAAGCTGGCCTATGATCTGCGTCAAACGTCAGGCCTTGATCCCCTCTCATGCCAGTGACTCAGCCACAGACCACACAGTTAAACGTACCTACAACTTAACCCTGGCTACAATGGCAGATCCACAGCTCCAAGCTAGGAGAGGGAACATTTGGAGAACATGCTGCATTTATATTTGGTTAAAAAGTGGCATTTCCTATGTGTTCAGATGTTTGGCCACCAGTAGTTGTATTTCTAACTAGTGACTCCAACTTAGGGAACACCAACTACAATACAAAATAAGCATCTTCATGGCTCCATGATTTACCCACTGAactgagctcctctctgctCCCCTCTGGATGTAGCAGCTCCCCAGTTCTCTAAGACAGAAAGTGCTTTCCTGTCCCGTGTAAGGAATACATTTACCCCTTTTGACTTGAAAATATGTAAGAGGAATCTAAGGGGTAAAAGACTGAGATTGAAGTGGCTGAGGTAACTGTGCTTTATCTAGCTGTTAAATGAAGATGTCGAGGGAGAGGAAGGTTGGCAGTATACTCCAAGACTTTGCTTCTTTCATCTGATATCCTTTCTCTCCCAACGCACCTGTACCAGACTTACAGTTGTGCAATACTTAAGTATACCACAAgtaaaaaatcttaattttggtGAGTTCACAAATGCGTGCCTGAAATGGGATTAGATTTGTACTTTAGTTCTTCTCTTCCCACTGCGAGTAAACCATCTACCACAGCTGTCACTAAATGAGAATACCTCAGTTTGCAGTGTGTAATCTGATACTTGTGCCTTATCGGACAACATTTCGACACTTTGTGAACATCCCTAATTCCATATTACAGGCCTGACATTAGAGAGACACATGAGACAGGAAAGCACTTAGGAGTCGTGAAAGTTTGTTCCAGGGTGGACGAGGGGAGCGAGGAAGAAAAGCTCAATGGGGTTGAGATAATGCCCTAGCTTTGGCTCCGGGTTGTGTCTGATGTCAGAGTGTCAGCATGACTCCTCCAGGGCATTGACAACCTGCTCCAGGATATCGGGGCAGTAGTCTGCGATCTGCTGGAGAACAGAGTTGGCGTACTCCTGCAGCTCTCCACTCTCCTTCTCACACACCTGCAGCTCT
>TU113827
TGGCAgtactgtcacacacacacactttgtcatGAAGACAAAATTAGAGACAAAAGACAACTGCACTGCTTTTAacttttgaggttttttaaaagAATGCACAACACCTTCCACTTAGTTACCTTTATTCAGTCACTGTACGTGTTAAATATCACGTTATTTACAAACCGATCTAAAAAGTCAAAATCTGCTGAAAAGTGACTAATTTCCTGTAAATGTAGATGCAATTATGCAATTAAAAACCTCAGCCctgaagatttaaaaaataaaaaaaaataaaaggaggcATCACTTGCATTGGTAAATACAAGAAAGAGGGGTGTCGCTTGTATTCTTCAGTGATTCCGTCGACAAACTAAAGATCAGGTGGGCTTTAAGTAACATCTATAGAAACTTTGGATGAGACTGAATGATCAGTGGAATCACATAAGTTCTTACATCATGCCTTAGCACCAATATTACAGAGGAATAAATATCCCTGCATTAGGTCCAGTACTGATCTCTGTGCATGCTCCAAGGCCACTAGAACGTTCTGAAAAGAAACATTGCATACCTCATAAACAAGTGGACGTTGAGTGCAAAACCATCTAAAAATGAATACATCACAGAGAATAaaagcttttctctctctctctctctctctctctctctcgtattTGAGGACATAGTGTAACTAAAAGCTGGCCTATGATCTGCGTCAAACGTCAGGCCTTGATCCCCTCTCATGCCAGTGACTCAGCCACAGACCACACAGTTAAACGTACCTACAACTTAACCCTGGCTACAATGGCAGATCCACAGCTCCAAGCTAGGAGAGGGAACATTTGGAGAACATGCTGCATTTATATTTGGTTAAAAAGTGGCATTTCCTATGTGTTCAGATGTTTGGCCACCAGTAGTTGTATTTCTAACTAGTGACTCCAACTTAGGGAACACCAACTACAATACAAAATAAGCATCTTCATGGCTCCATGATTTACCCACTGAactgagctcctctctgctCCCCTCTGGATGTAGCAGCTCCCCAGTTCTCTAAGACAGAAAGTGCTTTCCTGTCCCGTGTAAGGAATACATTTACCCCTTTTGACTTGAAAATATGTAAGAGGAATCTAAGGGGTAAAAGACTGAGATTGAAGTGGCTGAGGTAACTGTGCTTTATCTAGCTGTTAAATGAAGATGTCGAGGGAGAGGAAGGTTGGCAGTATACTCCAAGACTTTGCTTCTTTCATCTGATATCCTTTCTCTCCCAACGCACCTGTACCAGACTTACAGTTGTGCAATACTTAAGTATACCACAAgtaaaaaatcttaattttggtGAGTTCACAAATGCGTGCCTGAAATGGGATTAGATTTGTACTTTAGTTCTTCTCTTCCCACTGCGAGTAAACCATCTACCACAGCTGTCACTAAATGAGAATACCTCAGTTTGCAGTGTGTAATCTGATACTTGTGCCTTATCGGACAACATTTCGACACTTTGTGAACATCCCTAATTCCATATTACAGGCCTGACATTAGAGAGACACATGAGACAGGAAAGCACTTAGGAGTCGTGAAAGTTTGTTCCAGGGTGGACGAGGGGAGCGAGGAAGAAAAGCTCAATGGGGTTGAGATAATGCCCTAGCTTTGGCTCCGGGTTGTGTCTGATGTCAGAGTGTCAGCATGACTCCTCCAGGGCATTGACAACCTGCTCCAGGATATCGGGGCAGTAGTCTGCGATCTGCTGGAGAACAGAGTTGGCGTACTCCTGCAGCTCTCCACTCTCCTTCTCACACACCTGCAGCTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU113825 True 3057 lncRNA 0.40 2 13322182 13325258
TU113827 False 1793 lncRNA 0.42 2 13322182 13324173

Neighbor

gene id symbol gene type direction distance location
LOC120564570 LOC104956524,LOC103371543 coding downstream 20860 13273770 ~ 13301322 (-)
tmem60 LOC104956518,LOC103371546 coding downstream 76008 13244209 ~ 13246174 (-)
LOC120564726 LOC103371554,LOC106926584,LOC106963159,LOC101069521 coding downstream 97140 13217937 ~ 13225042 (-)
fam185a fam185a coding downstream 105760 13212809 ~ 13216422 (-)
LOC120563974 lrrc17 coding downstream 112641 13204676 ~ 13209541 (-)
LOC120564184 dynlrb2,LOC106573385 coding upstream 61483 13386741 ~ 13387986 (-)
nfat5a nfat5 coding upstream 84315 13409573 ~ 13426661 (-)
LOC120563596 LOC794378,LOC106676715 coding upstream 192425 13517683 ~ 13520737 (-)
si:dkey-234i14.6 LOC104941367,LOC101483377,LOC102290229,LOC105938209 coding upstream 346698 13671956 ~ 13682237 (-)
prpf18 prpf18 coding upstream 360940 13686198 ~ 13693332 (-)
G84528 NA non-coding downstream 49653 13271252 ~ 13272529 (-)
G84533 NA non-coding downstream 85321 13236651 ~ 13236861 (-)
G84532 NA non-coding downstream 86772 13235173 ~ 13235410 (-)
LOC120563976 NA non-coding downstream 120519 13200943 ~ 13201663 (-)
G84446 NA non-coding downstream 128476 13193269 ~ 13193706 (-)
G84585 NA non-coding upstream 109481 13434739 ~ 13444612 (-)
G84592 NA non-coding upstream 319159 13644417 ~ 13644848 (-)
G84597 NA non-coding upstream 358566 13683824 ~ 13685469 (-)
G84719 NA non-coding upstream 747375 14072633 ~ 14072948 (-)
G84751 LOC103368197 non-coding upstream 912324 14237582 ~ 14238451 (-)
prr5a prr5,LOC103371545 other downstream 66089 13246828 ~ 13256093 (-)
G84530 LOC100696427,LOC106963151,LOC107104182,LOC107388919,LOC104956556,LOC102796452,LOC102202152 other downstream 91087 13230617 ~ 13231095 (-)
G84123 cat,LOC102293651,LOC102204975,LOC102775586,LOC102293936 other downstream 1177636 12141523 ~ 12144546 (-)
G84083 NA other downstream 1433784 11888027 ~ 11888398 (-)
ptpn9a ptpn9 other downstream 2061221 11173553 ~ 11260961 (-)
LOC120564547 fbxl14,LOC103380143,LOC107388938 other upstream 715 13325973 ~ 13385205 (-)
mafb maf,LOC104941368,LOC104940469,LOC101071510,LOC101484138,LOC103380135,LOC102219741,LOC106520304 other upstream 248573 13573831 ~ 13618786 (-)
zgc:77752 NA other upstream 705846 14031104 ~ 14037716 (-)
LOC120564470 NA other upstream 897939 14223197 ~ 14236952 (-)
LOC120563775 cacna2d1,LOC104952157 other upstream 1176638 14501896 ~ 14558228 (-)

Expression


Co-expression Network