zgc:77752


Basic Information

Item Value
gene id zgc:77752
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 14031104 ~ 14037716 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU114030
TGCCTTGTCTTTTTAAAGTTGTGCAGAAATCCACATAATCCAGGCCCAACCTCAGTTGCCCGTGCTGTTGCTAATGCAATGGCAGATTTTGGTCCTCCAGGAGAAACCATCCTTCAAAGATCGGCTCTGCTGCAGGAGGAATTGAACAGTAGTGACTGTGGCTGGGCTCTGCTGGTCACCGAGTCAGATCCTCAGGTTCTCAGTTGTCTGTTGTGGACCTGGCTGGACAAGTTAAAGGTCAGTGGTATCTAACAAGAGGACATAATTCTAGTATTGTCAACTTGTCCGGGGCgctgtgaagtaaaaaaaataaaatacatcttgACGTTTTGAATTTCAGTTTTCACTTCTGTGGTAAACATCTTTCTCTCAGTCCGATCTCTGTTTCTTCCAACCTCATCCAGGAGCCTGTTCTGGGTGCAGAGGATGTAGACAGGTTGAGCTGTGGCGCAAACAACAGGAAGCCTCTCAATGTGCTCAAGAAGccacagagacacacaatctATTGTCTACTGAGCTGTATGAGCACAGTGACCAGCCTGTGTCCACACAGAGAGGATGCAATGCTGCAACAACTGATGAAGGCACTAACAAGGCGTCCACGGGAGGAAATGAGAAGCCTTGCAACTTTAATGAAGGTCCTGAAGTCGAGTTTGAGAGAAACCTTCCACAACTAAATCTACCTCCCGAGGGCCTGAGGCACCAATGCTACACTTTGAAGAGCAGAATCCATATTGGAACAATTTCTAACAGagcattttttaatttaaaagaaggTGTTATTTTATCCTCTGCACCCGATAGTGGGCAAAACCATGTGTAATAGGCCCTTCttacagaagacattttgacatgtcacagtaggaaacaCAGGTGTACataatacataaaatatattatgaccatttagctgctttagATTCAGGATCCTGGACTGTCACACTTCTGGGATACTTGAGGAGAACAGAGCCATGGTAAatattattagtaacaccttTGTGCTTCTGCTCTTTCCCTACTATGACCGGTTAagatgtctgctgtgaaaaaaggaaGATTAGGAAGGTTCCTAAATCTTTTTGTAGCCCTGAAATTTGGCTCCTGGATTCCCCCGATCTTACTGATAGTGATACTGACATCTTCccttttacaaaatataaacCAAAAGTACACAATGGGTGTTAAATCAGCACCAACTGTCTCTATATGTTTCTCCATGGCActaaaatgttgtgtttgtgtagttTTTGCTCATACTTTCACACTTGACAACCACTCACTCACGGCAGTAAGAAGGGAACACAGGAAGTCCTATAGATTTTTGTCTTTACATCCCTATCCTTTTCAAGCATATATTGCCCTTTATGAGCAACTGGTACAAAGTCTTGTGTGGTCTTGTGTGGTTACAGTGGATAAGGAAGACTGATCCATTAAACCCAACCACATCATATTTGAACATGAATCCGTAAAAACTCAAAATaagcaataacaaaaacaaataaaaaaagtcaggtGGGTGCACTAATAGGAGAGGGAGGGACCCTAggcctaataaaaaataaaagggcAAGTCCTGCATACTGTGCTGAAACAGTGGTTAAAGCTACAGTAGATTTCAATAATGACACTGATACAAtgtttacttttactttgactgtttactgttactTTAAACAGTACCAGTATGTAAGCTACTGTACCTTAGTACTAGGCCAGCAGACTAAATCCAAAAAGTGTGTCCACAGTGTGTTCTGTGGCCTGTTTCAGCCTTTcatgataataataaataaatcatttacaTCATCTGCA
>XM_039807392.1
AGTGGAGCTGGGTcaatgcagtgtgtgtgcagcagggTGGGTCAGCATAGAGGAGCACATGTGTGTTCTCCTGCCTTCAGCCCccctttttcttcactttcctgcACTCTTAAACtctaaaaatacattcaatggGATTCACAGCTTCACTGCAAAACATAACCAAAAAGGAAGATGCCGATACCAGTACCACAGCCGGCCTACTCCCAGGCCAGGGAGAACCTGGTGAAGGCTATCCCACCCAAGCTCCTCTGTCTGCTGGCCTGTGGAGGAATTGACTGCCGCTATGAAGGACCAGCATGTTGGAAATTAAATCAACAGGTCATTCGAGGCCTTTTTTCCTCCTGGGTGACAGATGACATTATTGCCATGGCACGACCATCCAATCATCTAATTGAGAAGTACAACATCATAGAACAATTTCGAAGGTTGAACATCAGATCGATCATCAACATGCAGCTCTCTGGAGAGCATGCTCACTGTGGACCTCCCCTAGACCCTGAAAGTGGTTTCACATATTCTCCACAGATCTTCATGGACAATGACAttTACTTTTACAACTTTGGGATGCCAGATTTCGGTGTGTCCTCTCTCGTCGGAATAATTGATGGAGTGAAAGTTTTGGCCTTTGCAGTGAGCGAAGGAAGAGTGGCTGTGCACTGCCATGCAGGCCTGGGCAGGACAGGTGTCCTGATAGCCTGTTACTTGATTTACACCCTGCGCATCAGCCCGAGTGAAGCCGTCCACTATGTAAGGATTAAACGGCCACGCTCGATCCAAACCCGAGCACAGCTCAGCCAGGTGTTTGACTTTGCTCGCCTGCTTGGCACACAGCGAGTCCAATACCCAGACCTCAGCCTGCGGCACGGAGACCCTTTCACACTGCAGCACTACCTAAACCGACAGGCAATACTGCTGCATGGCCAAGAGGCACGCACCCTCAGACAAACACCCAAGGTGGTGTACCtcctgtgtgtgcgtctctccTGCTTAGCCCTGGGTCTCCCTGCTCCTCCAGGGATCCAGGCTGAGCTGGAGAAAAGGTCAGCACTGAGGACCCTGAACCGGACTGTGAGGGAGACCCTGGTGGCCAAACAGTACTTGCCCTTACTGAGGGAGGGTCACAAGGGGCCGTGGGTGACCTCAGGGTCGGTGTCCTCCTGGGACGAGCCACTGGGATtcttggagagaaagagagaggtgcTGCTGGACAAACGCAGCTACAGCGACTCTGATCTCAGCAAGATTGCAGAACATCAGGATCTGGACTTGAGTCCATACTGCACCCCAGCACTTGGAAATGAGAGACAGTGGTGTTTGCAGGATCTGATACGACCTGATCTGAGACCAGGTAGTCCGATCGTTGCCACCGTATCACCAGGCCACCAGACTACCAAAAAGGAATCTCATACACTTAACATCCCAATATCTAGCATGACAACAAGCAACAACTGTGCCAAGAGATCTAAGTGCACAGCGAAAAAGGCACTTGCCAAATACAGCTCCAACACTGAGTTGTGCAGAAATCCACATAATCCAGGCCCAACCTCAGTTGCCCGTGCTGTTGCTAATGCAATGGCAGATTTTGGTCCTCCAGGAGAAACCATCCTTCAAAGATCGGCTCTGCTGCAGGAGGAATTGAACAGTAGTGACTGTGGCTGGGCTCTGCTGGTCACCGAGTCAGATCCTCAGGTTCTCAGTTGTCTGTTGTGGACCTGGCTGGACAAGTTAAAGGAGCCTGTTCTGGGTGCAGAGGATGTAGACAGGTTGAGCTGTGGCGCAAACAACAGGAAGCCTCTCAATGTGCTCAAGAAGccacagagacacacaatctATTGTCTACTGAGCTGTATGAGCACAGTGACCAGCCTGTGTCCACACAGAGAGGATGCAATGCTGCAACAACTGATGAAGGCACTAACAAGGCGTCCACGGGAGGAAATGAGAAGCCTTGCAACTTTAATGAAGGTCCTGAAGTCGAGTTTGAGAGAAACCTTCCACAACTAAATCTACCTCCCGAGGGCCTGAGGCACCAATGCTACACTTTGAAGAGCAGAATCCATATTGGAACAATTTCTAACAGagcattttttaatttaaaagaaggTGTTATTTTATCCTCTGCACCCGATAGTGGGCAAAACCATGTGTAATAGGCCCTTCttacagaagacattttgacatgtcacagtaggaaacaCAGGTGTACataatacataaaatatattatgaccatttagctgctttagATTCAGGATCCTGGACTGTCACACTTCTGGGATACTTGAGGAGAACAGAGCCATGGTAAatattattagtaacaccttTGTGCTTCTGCTCTTTCCCTACTATGACCGGTTAagatgtctgctgtgaaaaaaggaaGATTAGGAAGGTTCCTAAATCTTTTTGTAGCCCTGAAATTTGGCTCCTGGATTCCCCCGATCTTACTGATAGTGATACTGACATCTTCccttttacaaaatataaacCAAAAGTACACAATGGGTGTTAAATCAGCACCAACTGTCTCTATATGTTTCTCCATGGCActaaaatgttgtgtttgtgtagttTTTGCTCATACTTTCACACTTGACAACCACTCACTCACGGCAGTAAGAAGGGAACACAGGAAGTCCTATAGATTTTTGTCTTTACATCCCTATCCTTTTCAAGCATATATTGCCCTTTATGAGCAACTGGTACAAAGTCTTGTGTGGTCTTGTGTGGTTACAGTGGATAAGGAAGACTGATCCATTAAACCCAACCACATCATATTTGAACATGAATCCGTAAAAACTCAAAATaagcaataacaaaaacaaataaaaaaagtcaggtGGGTGCACTAATAGGAGAGGGAGGGACCCTAggcctaataaaaaataaaagggcAAGTCCTGCATACTGTGCTGAAACAGTGGTTAAAGCTACAGTAGATTTCAATAATGACACTGATACAAtgtttacttttactttgactgtttactgttactTTAAACAGTACCAGTATGTAAGCTACTGTACCTTAGTACTAGGCCAGCAGACTAAATCCAAAAAGTGTGTCCACAGTGTGTTCTGTGGCCTGTTTCAGCCTTTcatgataataataaataaatcatttacaTCATC

Function

NR:

description
protein tyrosine phosphatase domain-containing protein 1-like

GO: NA

KEGG:

id description
K18078 PTPDC1; protein tyrosine phosphatase domain-containing protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
TU114030 False 1809 TUCP 0.41 4 14031104 14033215
XM_039807392.1 True 3135 mRNA 0.47 13 14031108 14037716

Neighbor

gene id symbol gene type direction distance location
odf3b NA coding downstream 109 14027898 ~ 14030995 (-)
rabl2 rabl2b,rabl2a,LOC102798136 coding downstream 4040 14022047 ~ 14027064 (-)
arsa arsa,LOC101072550 coding downstream 245353 13781377 ~ 13785751 (-)
LOC120563982 pgc coding downstream 269771 13758290 ~ 13761333 (-)
chkb chkb,LOC100699097,LOC106532760,LOC102775816 coding downstream 291004 13727188 ~ 13740100 (-)
LOC120563866 LOC100700167,LOC108229827,LOC102796952,LOC103368207,LOC106520317 coding upstream 1713 14039429 ~ 14046318 (-)
neto2b LOC103368211,LOC104965107 coding upstream 16236 14053952 ~ 14062743 (-)
terb1 terb1 coding upstream 41460 14079176 ~ 14090593 (-)
frmd4a frmd4a,LOC102793558 coding upstream 72750 14110466 ~ 14198123 (-)
LOC120564658 NA coding upstream 207504 14245220 ~ 14251969 (-)
G84597 NA non-coding downstream 345635 13683824 ~ 13685469 (-)
G84592 NA non-coding downstream 386256 13644417 ~ 13644848 (-)
G84585 NA non-coding downstream 586492 13434739 ~ 13444612 (-)
G84536 NA non-coding downstream 705846 13322182 ~ 13325258 (-)
G84528 NA non-coding downstream 758575 13271252 ~ 13272529 (-)
G84719 NA non-coding upstream 34917 14072633 ~ 14072948 (-)
G84751 LOC103368197 non-coding upstream 199866 14237582 ~ 14238451 (-)
G84752 LOC101063650,LOC106561215,LOC104965117 non-coding upstream 202805 14240521 ~ 14241054 (-)
G84760 NA non-coding upstream 224987 14262703 ~ 14263115 (-)
G84761 NA non-coding upstream 225700 14263416 ~ 14263741 (-)
mafb maf,LOC104941368,LOC104940469,LOC101071510,LOC101484138,LOC103380135,LOC102219741,LOC106520304 other downstream 412318 13573831 ~ 13618786 (-)
LOC120564547 fbxl14,LOC103380143,LOC107388938 other downstream 645899 13325973 ~ 13385205 (-)
prr5a prr5,LOC103371545 other downstream 775011 13246828 ~ 13256093 (-)
G84530 LOC100696427,LOC106963151,LOC107104182,LOC107388919,LOC104956556,LOC102796452,LOC102202152 other downstream 800009 13230617 ~ 13231095 (-)
G84123 cat,LOC102293651,LOC102204975,LOC102775586,LOC102293936 other downstream 1886558 12141523 ~ 12144546 (-)
LOC120564470 NA other upstream 185481 14223197 ~ 14236952 (-)
LOC120563775 cacna2d1,LOC104952157 other upstream 464180 14501896 ~ 14558228 (-)
si:ch1073-390k14.1 LOC103375950 other upstream 924144 14961860 ~ 14967783 (-)
G85014 ppp6r2,LOC103370604 other upstream 1028323 15066039 ~ 15073350 (-)
ttc23 LOC104957250 other upstream 1435218 15472934 ~ 15484145 (-)

Expression


Co-expression Network