G85027


Basic Information

Item Value
gene id G85027
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 15178340 ~ 15179173 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU114507
gttttatttatttttttaaacggtaCCTTGTCTGTGCACCACCACTCTGCCGTCAGTGTTGCTGTTGGTGAGAGCCATGAAGAAACCTTCCACCTGCATCATGGGAGATGCAGACAGCACTTTCTCTGCCTCTGACCCCTGCTGGTCTGCTGAAGAACTGGCAAAGGGCTCTGGTTGCTCTGCAGCGTTTGAAGGTAGCGGTTTAAGCCCTCAGTGCGTCGGTTCTCCTTGTTGGAACTGCTCGGAGTGTGCAAACTCACACCTGATCCTGCGTACTTCTCCACGAAGCCACCCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU114507 True 296 lncRNA 0.52 2 15178340 15179173

Neighbor

gene id symbol gene type direction distance location
fkbp4 fkbp4 coding downstream 6137 15163553 ~ 15172203 (-)
b4galnt3b LOC103133797,LOC106915345 coding downstream 19516 15139441 ~ 15158824 (-)
c2cd5 NA coding downstream 47076 15106071 ~ 15131264 (-)
lmf2a lmf2,LOC102783784 coding downstream 72598 15098626 ~ 15105742 (-)
dnaja2b dnaja2,LOC103370603,LOC100703595,LOC101465466 coding downstream 121210 15051850 ~ 15057130 (-)
wash1 wash1,LOC102303465,LOC101485180 coding upstream 3436 15182609 ~ 15189986 (-)
ptprq ptprq,LOC107705767 coding upstream 40577 15219750 ~ 15261813 (-)
LOC120563965 ptprq coding upstream 55159 15234332 ~ 15237616 (-)
otogl otogl,LOC102779350 coding upstream 83313 15262486 ~ 15291962 (-)
syt1b syt1,LOC100710649,LOC102779835,LOC103358504 coding upstream 119514 15298687 ~ 15304280 (-)
G85011 ppp6r2 non-coding downstream 115203 15062611 ~ 15063137 (-)
G85007 NA non-coding downstream 120411 15057725 ~ 15057929 (-)
G84948 NA non-coding downstream 222933 14954128 ~ 14955407 (-)
G84971 NA non-coding downstream 326317 14851720 ~ 14852023 (-)
LOC120564774 NA non-coding downstream 370272 14807411 ~ 14808068 (-)
G85084 NA non-coding upstream 182664 15361837 ~ 15363425 (-)
LOC120563611 NA non-coding upstream 274036 15453209 ~ 15455514 (-)
G85121 LOC103364747,LOC103358513 non-coding upstream 276482 15455655 ~ 15458913 (-)
LOC120563610 NA non-coding upstream 276667 15455840 ~ 15456554 (-)
G85125 NA non-coding upstream 287409 15466582 ~ 15472857 (-)
G85014 ppp6r2,LOC103370604 other downstream 104990 15066039 ~ 15073350 (-)
si:ch1073-390k14.1 LOC103375950 other downstream 210557 14961860 ~ 14967783 (-)
LOC120563775 cacna2d1,LOC104952157 other downstream 620112 14501896 ~ 14558228 (-)
LOC120564470 NA other downstream 941388 14223197 ~ 14236952 (-)
zgc:77752 NA other downstream 1140624 14031104 ~ 14037716 (-)
ttc23 LOC104957250 other upstream 293761 15472934 ~ 15484145 (-)
G85133 mef2a,mef2aa,LOC107553916 other upstream 335605 15514778 ~ 15544082 (-)
chd2 chd2 other upstream 976811 16155984 ~ 16187336 (-)
st8sia2 fam174b,st8sia2,LOC100690985,LOC101474125,LOC102798331 other upstream 1009680 16188853 ~ 16209186 (-)
G85321 NA other upstream 1260201 16439374 ~ 16440965 (-)

Expression


Co-expression Network