G85084


Basic Information

Item Value
gene id G85084
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 15361837 ~ 15363425 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU114585
GTGctgtatatacatgtacatgTGTGGGACTAAAAATAACAAAGGAGCAGGGGCTATTGAGCTgtgaaaacaaaccaacaaaaaaacaaaaaaatatggaATAGAAAGAGTTAAAGTTCCTGTGGTATTGTTTACAGGCATGGCAGGGAGAGTTTCAGAGCAGTCTTTCTCTGAATTGTCCAGCACTCGCCTTGTCAGGGTCAGGCCTAAACCCGAGTGGTAAAAACAATGAAGATTAAGAGGATAAAAAGGACATTCCGTTTATCTGGATGGTCTCCTTCAGACCCCAGGTATTATGTATCCAGAAAGGGAGGACAGATGGAGGTGAGGCTCCAGGCACAGACGGGAGAGGCTAATCTGGATagtcctccccctccctctgccAACCTCTGTCCCTTTCCCTTGCCACCTAGCTCTTCTCATATTGGCATGTTGCGCTTCAGTTCACTGGGGGAAGGGGGGATGCCATCCTCCAGCTTAGTAAAGCTGGTGGAATAGCTAGGCTTGGTGGAGTGCTCTTCAGGACCAGGGGCTCTTTGTCGTGGAGGCAGCGTGGAGCTCCGGGCTTTGACCCTGGAGCGGGGCTGTTGAGCCGGAGGGCCTTTCAGCACGAATAGTTCACTGGGGGCTTTGGGCTCTTGGGCTGATGGGAACTCTGTGGGATGCGGAGATGATGGTGACACAGGTGTGAGAGGGGCAGAGAGTGGATTGGATGAGGCTGATAATGAGGAGCCCAGTGGAAGCAGGGGAATAAGTGTGGCTGCCTGCTGGAACCTGGTGAGGCTGGTGGAGTGGCTGGGCCGTGGCAGACTGTAACAAGCCTCAGCCCCTTTGTGGCGAGAAGGCAGGGTGGAGCAGCGGGCCTTCGCCCTTGAGCCTGGCTCTCTGGGTGGAGGAGCGATTAGTGAGAAGGGCCTAGTGTCAATATCTGACGTTGTCATTTCTGCTCTGGAGCCCTTCAGACTCTGGGATGAGCCTCCTTTAGATGATCGACGAGACTGAGGCTCTTGGTCTTTCTGGTACTCCTGTTCGGACTCCGAGCGGGGAAGCTCTGTATCTCTAGCTGTGCACGATGAGGGTTCCTCATCTAACAGGCCCAGCTCGCTCATGAAGGCATCCAGATCAACAGTAAAGTTTTCCTTCTCAACTGCCTTCTCTTcaactttcttttcttcttcttttatttgttcTGCTTCATCTTTTTCTTCTCCTACCTCTTGCTCATTATCCCCCATTCCAACCTCTTCATTCACTTCTacatctttttccttttctccctCTTCTACCTCTCCACcctcatcttcttcttcacctcCTCGCTCTAACTGTCTATTTTCTTCAACTTCCTCAAATGACTTCCCAAGCTCCGGATCACTGTCACTGCTCCTTCTTGGTTCATCCAGATCGATCTTAactctttcttcct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU114585 True 1426 lncRNA 0.51 2 15361837 15363425

Neighbor

gene id symbol gene type direction distance location
cd9a NA coding downstream 43992 15310877 ~ 15317845 (-)
syt1b syt1,LOC100710649,LOC102779835,LOC103358504 coding downstream 57557 15298687 ~ 15304280 (-)
otogl otogl,LOC102779350 coding downstream 69875 15262486 ~ 15291962 (-)
ptprq ptprq,LOC107705767 coding downstream 100024 15219750 ~ 15261813 (-)
LOC120563965 ptprq coding downstream 124221 15234332 ~ 15237616 (-)
pgpep1l LOC103364746 coding upstream 93382 15456807 ~ 15463714 (-)
nr2f2 nr2f2,LOC107388818,LOC100705923,LOC108230091,LOC102227842,LOC104957255,LOC106930729,LOC105023478,LOC106573769 coding upstream 438999 15802424 ~ 15811999 (-)
slco3a1 slco3a1 coding upstream 850350 16213775 ~ 16254088 (-)
LOC120563512 LOC104964038,LOC103375536,LOC102794895 coding upstream 1017518 16380943 ~ 16409443 (-)
zgc:162879 LOC104964034,LOC103368560,LOC100692867 coding upstream 1088608 16452033 ~ 16461232 (-)
G85027 NA non-coding downstream 182664 15178340 ~ 15179173 (-)
G85011 ppp6r2 non-coding downstream 298700 15062611 ~ 15063137 (-)
G85007 NA non-coding downstream 303908 15057725 ~ 15057929 (-)
G84948 NA non-coding downstream 406430 14954128 ~ 14955407 (-)
G84971 NA non-coding downstream 509814 14851720 ~ 14852023 (-)
LOC120563611 NA non-coding upstream 89784 15453209 ~ 15455514 (-)
G85121 LOC103364747,LOC103358513 non-coding upstream 92230 15455655 ~ 15458913 (-)
LOC120563610 NA non-coding upstream 92415 15455840 ~ 15456554 (-)
G85125 NA non-coding upstream 103157 15466582 ~ 15472857 (-)
LOC120563424 NA non-coding upstream 495416 15858841 ~ 16048241 (-)
G85014 ppp6r2,LOC103370604 other downstream 288487 15066039 ~ 15073350 (-)
si:ch1073-390k14.1 LOC103375950 other downstream 394054 14961860 ~ 14967783 (-)
LOC120563775 cacna2d1,LOC104952157 other downstream 803609 14501896 ~ 14558228 (-)
LOC120564470 NA other downstream 1124885 14223197 ~ 14236952 (-)
zgc:77752 NA other downstream 1324121 14031104 ~ 14037716 (-)
ttc23 LOC104957250 other upstream 109509 15472934 ~ 15484145 (-)
G85133 mef2a,mef2aa,LOC107553916 other upstream 151353 15514778 ~ 15544082 (-)
chd2 chd2 other upstream 792559 16155984 ~ 16187336 (-)
st8sia2 fam174b,st8sia2,LOC100690985,LOC101474125,LOC102798331 other upstream 825428 16188853 ~ 16209186 (-)
G85321 NA other upstream 1075949 16439374 ~ 16440965 (-)

Expression


Co-expression Network