st8sia2 (fam174b,st8sia2,LOC100690985,LOC101474125,LOC102798331)


Basic Information

Item Value
gene id st8sia2
gene name fam174b,st8sia2,LOC100690985,LOC101474125,LOC102798331
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 16188853 ~ 16209186 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU114811
AAACACTTTATGCAGATAtgaataaacattaaaataacttcacataaaaaaatatactttactGGAGACTTAAGTAATTGTGGTCAGGAATTAATtcaattatgtttatttttaggccaATAGCAGCCTGGTTGGTCAAACCAATACATCAGTTTAATGCTAGTTTGGATTATATTGTTGAACTTTCAAGCTTCACCTCAGTAAAACTCTTAATGTTTAGTTGAGTTTTTTAGGAGTTGTCTTGATACAGGACGCTTTGGGgtatttttctgcaacaaaatGCTTTCCAAGAGCTCTGCAGCTAAACAAGTTGCCTCTCATGTGCTTCCAGCCATGTGATACATAATAGTGTTGTTTTGCCAGGATGCGCCTGTTGACTCGCATTTTGGCCCACACCCTTACTTAAATTAAGAATGGATACGAAAGTTGTACTAGAGAGTGAGCGGTCTGAAGCAATGAATGGTTTATTTGTCTGAGCTcggcaaaaatagaaacatTCTGCATCCAACACAATTAAGTTAATTAACCCAGAATTTGCCACTGTTGAAAAAACTTTATACTGAcctgtactgtacagtagttTCTGCTGATAACCTGAGGGGGTTGTGCTGTATAGTTTCATCTTACCTCTTTTCATGTATACCGTATGTAAACATCTGTTTAATGTCCAAATTTCAGCAAACATGTTAGCTTTTGCATGTTTTGTCTTGACTTGATACATACAACTTtggtatttatatttttgttgttgttgaaaataTTCAATATGACTCAAGGATACTTAAATTGTGCAGTTATGACAAAGTGAATGTACTTTTCTGTGGCAGAAAACAAAAGATCAGAATGGGGACAATAACACTTCAAGACTCCCTTAAAACGATTTAACACTTCAAAGGAAGTACTTTTATTTCAGTAGTATTTCAAAGAAATGGAAACTATGGAAACAACTGTGGTTACACAAAACATATCTGTGTCAAAAACCAAACAGGGTcttgttttttaataaacttccaaaacaaacttttacaaacttttttttttttttttttttttaaatgtgggaTTGGGGAAATTAGCTACAGTCTTCAAATAGCTACCACAATGACTTTGATTCATTTTACAACAGGAACTGTCTGCAGCAGATGATTGCGTTCTAGTAAAAGTCCAGAATTAGCATCTTTAAATGAGCAGGTTTTTTCCACTATTTCACGCACAactaaagataaaataaaagatgTTGCCAAGATGTTAGAGGATAACTGTACAAGGGTGACATACTTGCCTGAGACAAACTTTAGCAAAGGCCAAACATGGATCTGCAGTTTTCTGCACATACAGTGAAAGACTAAATGAAACATGACTCGATACTGAAATGAACAGTGGCCATACAGTCTGATGGAAAACAGAGGAAATAGCCAGCAGTCTGCTAAAGCACATGCCACAAATATGGTTAAAAGTTTGATTCACATATGATTGAAAAACATTCACATACACTCCATATGGCTTGTGTATctaacagtaaatatattagtcTTCTATGAATGGCCATAACTTTGTTTGGAACAAAGGAAACTACACAATGTTCTTTCTCCTGGAAAGAAAAAGTTCAGCATTGCCATTGTCATTCAGaaacagctgcagctgtagGCCATGGTGCACAAATCCAATAACAGTTTAGATTAAAACAGAAGATCACCTCAGCCACTCACATTTGCTGCAGAAACCTAATAGGTGTACTCTGTAACGTTGTTAGTTTACTGTAATTACATTCAGAGCGCAGACACACATGGGTAAGGTTTGTGAACGCCTCTGCAATTTCTTTTGTGTACTTTATGTCAAACTTTCGGTTGATCATTTGTGTATTTAGTATTTGATTTAAAGATATAACAAATTTGACAAACCAGTTATGATTTTCATTGTCTTTATTAGTAATTCAATACTTATCTAACGGGCCAAATCGTTTCAGGTAAAATCTCCATTTTAAACCCACATGTCAAAACATTTCCACCAAGATAGggacacttttctttttttgtttttaccagAATCTGTACGGCACAGAGAAGCAACTCTTCAGGGGGAAAACATCAGTCCTTTTCAAGTCAGACATCACAAGAGTCAGTGAGCCATTAATGGAAATTGATGTGGGAGACTTTCCATAATACTTTACTAGCTGCTCACCTCTCAAACCTATCTCAAACAAGAGATACCCGATTTTGGGGATTATTTTTAATAGAGTAACTAGACATTATATGGCAACATAATATTGTTTTGATTTAGAAAATAAGACACTGGGAGCATGTCCAACATGTTAAATACTGAAACTACATCACTTCCAACCTGTTGTTGATATTGTTCAGTGGTTACTTGATACAGTGACATTGTGAATTAATTAACACACCCGATCACAACAGATTACAGCATTCACATTCATAGCAAATAGATGTATTCCATAAACACCGTACAAATATAACCTGACTATATTATTTGAGATTTTAACCAAATTTGAACCTCGAAAATGTAGAACTTCAGCTGAGATAGCAGCAAAACAGGAATGTCTACATCAACACACGGTAAAAAAATATACACTTACTCCATAGATAAGGACAGACTGCCTTCGACAGTATATATGCACAATAAAGTGGTTAGTAGATAGAAATATATTTGGTATGAAAGTTtagttaaaaatatcaatagaTTCTTCAGTgtgcaattttttttacatttcaataaAGTAATTCTGCACAATATTTCTTGCATGTTAACATGTTATGCATTAACGGACTGTCTTTAGTTTTAATATGGGAAGATCATAGCTTTAAAGCCGGCATTGGTTCCTCCTATAAACtcagaaaatgtaataaaaaaaaagaaaagaaaagaaaaagaagtaaTTTCCATGTAATTAGATGTTTTGAAGACAATTGAATGCAAAGTCTTTAACAGCCTGATTACTGAATGACTTTTGAGAAGAAGTCACAATATAAAGCATCCTGATCTTCAACATCAGAAACAATTGTGCAAGTTATTTGTGCCACATGATAGAAGCGTAAGCTAAGCAGCAAACAATGATATCCATACGGCTCCAGTCCTTTAAACACAGGTAAAAGCCATGCACAAGCAGCATTAGAAGTTGACGATCTGATAAGACTTGAACAGCATAAAGATATAAGAAATCACTTCAGATGTCCCGGGCAGAATAGGAGATATCAAATATTGATGTCCATGCTGGGATTCacctGTATTTGACATCAAAGAGGGTTGAGTCATCCTCATCATCGTTCTCCTCATTAAGAGGGGCCATCTCCACACGCTCTGCAGGTGTCGTTATAATGTCGTATTTTCGTGTTTTCCTGATCCGTCTCCCAGATCTGACCACTTTGATGACTAGGCATGTGATGAGAACAGCTGTTAACACGCAGATGAAAATAACAATGTTTTTCAGAGTTGGAAGATACGTTATTATTGATGAAATCCGGGATCCCACGGCGGCATCTGTGACATTATGTGTCAGTTCATCTTGGCTGATGATGGATGATGTAGAATTTAACTGCGTCGCGGGTGAAGAATGAGTTTGTAGTTCGCCACCGACAAGCCAAAGAGCCGCGATAATAAAAGTTAAAACCGGATTGTATGTCACCATGgtgctgaaataaaaaaaatcaaaatgcaAGCCAGGATGTTCTTTCAGTAGCTTCTCCAAACTAGATGAAATGCGACAGCAGCTGTCACATTATAGAGCATCGGCTTATCACTGTTAGTTTTGGCTATTTACACAATAATGCGAAACGCAAATATCCATCTTCCTCCTAGTGCAATCGTCTCCAAATGGTGGACTTCTAGGTGGTAACTGATTTGCCTACACAAACGTGTTTCCCTTGAGGTGAGTTACAGCAATTCCTTCCTTATTGCATTTGGACTGCATGGAGATGGGGATTATCCGCCTCCGGAAGAGCTCCGC
>XM_039808675.1
CTCTATTTTGAAATGTAGGCTATCAGAGCACACGTCCCACATTAGATAAGACTGCACTCTCTGTGTTTGGATACGACTCTATAGCCTACGCacctgtctgactgtctctaCTGCGGTCTTACGCCTCCTCTTATCGTGAGCCAACAACACCTGGAGGAGAGTGGACTCAACCCGGCTGAGCTAAAACATGGAGCTGTTGGCCGCTGCGCCTTTAAGACCGCATGTGGTCTACAGCTCGCTGCTCCCATGGCAGGCTCTGTAGGTGCACCACGCTCTCAAAGTTTGACTGGGGAATAGCTCCGGGTACAGGGGACACGGCAGCAGCATCCCCCCCGCcgggaaatacacacacacacaaggaaccATCATCTGAAGAGGGGGGAAGGACCGCAGCTCGCCTGGGAGTGTCCGACTCAGGCGATAAGAACAATGGAAGAGGTGGCTAAACGGATTTTCGATTTCTAAATGAGAAACACAAGAAGGTTATTGTAGCGGCGTTTGCTGAGAGGGACTCCCGGCTGCAGCCTCCCCCCCCTCAGCCATGCCGCTTGTATTCCGCACGCTGCTGTTCGGCTTTGTAACGCTACTCGTTGTGGTTTTCATAATTGATGATATTGCAGAAGTGGAGGAAGAAACTGCAAATACTGGACATTCACAGAAGATGAACTTGCACCAGCTCATCCCTCAACCACACAGAAAGGCTGCAGCACAAGTGGATCCGACTGCTTTGACGAGATTAAGCAAAGATGTAAATCATCTCGGTCCGAGCTACAATACCACTGTCAAGCTCTCGTCAAACAACTGGACCTTCAACAAGACGCTCTCCAACCTCATCAGGAAGAATATTCTAAGATTTCTTGATCCGGAGAGAGACATCTCTATCCTGAAGGGCACGCTGAAGCCAGGAGATATCATCCACTATGTGTTTGATCGCCACAGCACCATAAACATCTCAGAAAATCTCTACCGTCTTTTGCCAACTGTATCCCCCATGAAGAACCAACATCACAGGCGCTGCGCCATTGTGGGAAACTCCGGGATCCTGCTGAACAGCAGCTGTGGACCCGACATCGACTCTCATGACTTTGTTATCAGGTGTAACCTGGCACCAGTGGAGGAGTACTTTCAGGACGTGGGGTGGCGGACCAACTTGGTGACCATGAACCCTTCAGTGGTGCAGCGGGCCTTCCAGGACCTGGTCAGCGAAGAGTGGAGGGATCGCTTCTTGCAGCGGCTTCAAAGCCTCAGCGGCAGTGTGCTGTGGATCCCAGCCTTCATGGCCAAGGGGGGAGAGGAGCGCGTGGAGTGGGCCCTTCGTCTCATCCTGTTGCACACTGTGGACGTACGCACCGCCTTCCCCTCGCTGCGCCTGCTCCACGCTGTCAGAGGGTATTGGCTAACCAACAATGTCCACATCAAGCGTCCGACCACTGGGCTCCTCATGTACACGATGGCCACTCGCTTCTGTGAAGAGATCCATCTTTACGGCTTCTGGCCCTTCCCACTCGACCCGCAGGGCAGATCAGTCAAATACCACTACTACGATACTCTAAAGTACGAGTACACGTCCAGCTCCAGTCCTCACACCATGCCTTTGGAGTTCAGGACCCTGAGCGCATTGCACAGACAGGGGGCGCTCCGGCTCCACACTGGGACCTGTGATACAGAGAGGAGACCACAGAAGGAGCTCCAGAGAAAATAGCTTAAAAGGAGGATCTCGATGGAAACCACTTTCTTCACTGAGCAGACTCTGTACAGACTGTTTTCTTGTTTACACACTTTTATGAAACTTGAATTAACTTATTTTCAGTAATTGGaactttttgtatttcaagCTATTTAGTGACTTGTTTCACTGGTTAACGAGATTTCTATGGCAACCTTTTAAAATAATGAGACTCTTTTCTGCTGGTGTGACCAAACTGTTCATAGAGATCCTGTCATGTTCATCTGTTggccccttttttatttttcttaaaaagaCCATTTTTGAAAGTCTATCCAGGTTTCTAGTATGGTTATAAGTTTAACATTAAGGGTTCAGAACatattttgatgttttgtgtTCAAATTGGTCATGATACGCCATCAATTAATATCCCCAGTTTATGATATGATAGGGCTCCATTTAAGGCTTCAGTTGTGAATCACTTTTTGGGCCACAAGATGGAAGCACTTAAAAATCAGGGAGACTGATCGtaaaagaagaaatgtgtgtCAACTCTTCAAACAGTGTTTTTTAATTTGATGTTCAACTTGTGATAACAAATTTTCATCTGATAATGAACTTTTTATGCTTTTGTAGCTTCTTATAAAATTCGTTAATGGTGTTTACCAAAAGTCCAGTCAACCAGAGCTGCCATGTGATAAGGTTAGGTTAaccaaaaggaaaaatggaagCACGTAGAATTGTATTCAGCTTCTTTGAGGACAAAGAGGGAGTGTACCAGCTGTTCACATAGGAATGTTTACACAGACTTAGCCGGCAGTAAACTCTCTTTGTTAACTTTTCTCAAAGAACACCAGCCCTGTTTCTGCACTGGAAATGTTAGTAGTGAGGGCAGACTGTAGTTGTGTTGTGGTAGTAAGAAAAGCTTAAATTTCTTTACATGAATGTATTGGTGATATTCTTACAAGTGCTGTAAGAAAGGATGCCCATGTTGTGCTTTAAATAAATTACAGTTAGCAGCAGTTTCAGTGTAATAACACTGAGAGGACGATTAGCTCGTAACTTATTTGCCTTCATTAATTTTAAATGCTGTATGAAATATACTTGTATAGTGTGTTAGGGTTAGTATTTTAACCAATATAGGTTGATACAGATATGTGGGGAATCTTTATTGAATTTGAGAGTATTTTGTGCCTATAATCACTCAATTTGACAATTTGGACCATTCACATTCCCAGAAATAACTGTTCAGGGTTCATCTAAATCATTCTTAACAGAATGGGAAAGATGTATCAATAGTATCACCCACTTACGAAACACTTTATGCAGATAtgaataaacattaaaataacttcacataaaaaaatatactttactGGAGACTTAAGTAATTGTGGTCAGGAATTAATtcaattatgtttatttttaggccaATAGCAGCCTGGTTGGTCAAACCAATACATCAGTTTAATGCTAGTTTGGATTATATTGTTGAACTTTCAAGCTTCACCTCAGTAAAACTCTTAATGTTTAGTTGAGTTTTTTAGGAGTTGTCTTGATACAGGACGCTTTGGGgtatttttctgcaacaaaatGCTTTCCAAGAGCTCTGCAGCTAAACAAGTTGCCTCTCATGTGCTTCCAGCCATGTGATACATAATAGTGTTGTTTTGCCAGGATGCGCCTGTTGACTCGCATTTTGGCCCACACCCTTACTTAAATTAAGAATGGATACGAAAGTTGTACTAGAGAGTGAGCGGTCTGAAGCAATGAATGGTTTATTTGTCTGAGCTcggcaaaaatagaaacatTCTGCATCCAACACAATTAAGTTAATTAACCCAGAATTTGCCACTGTTGAAAAAACTTTATACTGAcctgtactgtacagtagttTCTGCTGATAACCTGAGGGGGTTGTGCTGTATAGTTTCATCTTACCTCTTTTCATGTATACCGTATGTAAACATCTGTTTAATGTCCAAATTTCAGCAAACATGTTAGCTTTTGCATGTTTTGTCTTGACTTGATACATACAACTTtggtatttatatttttgttgttgttgaaaataTTCAATATGACTCAAGGATACTTAAATTGTGCAGTTATGACAAAGTGAATGTACTTTTCTGTGGCAGAAAACAAAAGATCAGAATGGGGACAATAACACTTCAAGACTCCCTTAAAACGATTTAACACTTCAAAGGAAGTACTTTTATTTCAGTAGTATTTCAAAGAAATGGAAACTATGGAAACAACTGTGGTTACACAAAACATATCTGTGTCAAAAACCAAACAGGGTcttgttttttaataaacttccaaaacaaa

Function

symbol description
st8sia2 Enables sialyltransferase activity. Predicted to be involved in N-glycan processing; oligosaccharide metabolic process; and protein glycosylation. Predicted to be located in Golgi apparatus and membrane. Predicted to be integral component of membrane. Is expressed in several structures, including nervous system; neural keel; neural tube; pleuroperitoneal region; and unfertilized egg. Orthologous to human ST8SIA2 (ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2).
fam174b Predicted to be involved in Golgi organization. Predicted to be located in Golgi apparatus and plasma membrane. Orthologous to human FAM174B (family with sequence similarity 174 member B).

NR:

description
alpha 2,8-polysialyltransferase IIa

GO:

id name namespace
GO:0006486 protein glycosylation biological_process
GO:0097503 sialylation biological_process
GO:0030173 integral component of Golgi membrane cellular_component
GO:0008373 sialyltransferase activity molecular_function

KEGG:

id description
K06612 SIAT8B; alpha-N-acetyl-neuraminate alpha-2,8-sialyltransferase (sialyltransferase 8B)

RNA

RNA id representative length rna type GC content exon number start site end site
TU114811 False 3961 lncRNA 0.36 3 16188853 16194602
XM_039808675.1 True 4003 mRNA 0.43 6 16193583 16209186

Neighbor

gene id symbol gene type direction distance location
nr2f2 nr2f2,LOC107388818,LOC100705923,LOC108230091,LOC102227842,LOC104957255,LOC106930729,LOC105023478,LOC106573769 coding downstream 376854 15802424 ~ 15811999 (-)
pgpep1l LOC103364746 coding downstream 725139 15456807 ~ 15463714 (-)
cd9a NA coding downstream 871008 15310877 ~ 15317845 (-)
syt1b syt1,LOC100710649,LOC102779835,LOC103358504 coding downstream 884573 15298687 ~ 15304280 (-)
otogl otogl,LOC102779350 coding downstream 896891 15262486 ~ 15291962 (-)
slco3a1 slco3a1 coding upstream 4589 16213775 ~ 16254088 (-)
LOC120563512 LOC104964038,LOC103375536,LOC102794895 coding upstream 171757 16380943 ~ 16409443 (-)
zgc:162879 LOC104964034,LOC103368560,LOC100692867 coding upstream 242847 16452033 ~ 16461232 (-)
sema4ba sema4b,LOC103368553,LOC100693140,LOC101470126 coding upstream 253369 16462555 ~ 16549024 (-)
LOC120563779 NA coding upstream 320256 16529442 ~ 16532441 (-)
LOC120563424 NA non-coding downstream 140612 15858841 ~ 16048241 (-)
G85125 NA non-coding downstream 715996 15466582 ~ 15472857 (-)
G85121 LOC103364747,LOC103358513 non-coding downstream 729940 15455655 ~ 15458913 (-)
LOC120563610 NA non-coding downstream 732299 15455840 ~ 15456554 (-)
LOC120563611 NA non-coding downstream 733339 15453209 ~ 15455514 (-)
G85250 NA non-coding upstream 48789 16257975 ~ 16258235 (-)
G85253 LOC104921699,LOC103367513,LOC104941665,LOC101473242 non-coding upstream 66465 16275651 ~ 16277412 (-)
G85312 NA non-coding upstream 161815 16371001 ~ 16372919 (-)
G85319 NA non-coding upstream 252376 16461562 ~ 16462518 (-)
G85328 NA non-coding upstream 319421 16528607 ~ 16528849 (-)
chd2 chd2 other downstream 1517 16155984 ~ 16187336 (-)
G85133 mef2a,mef2aa,LOC107553916 other downstream 644771 15514778 ~ 15544082 (-)
ttc23 LOC104957250 other downstream 704708 15472934 ~ 15484145 (-)
G85014 ppp6r2,LOC103370604 other downstream 1115503 15066039 ~ 15073350 (-)
si:ch1073-390k14.1 LOC103375950 other downstream 1221070 14961860 ~ 14967783 (-)
G85321 NA other upstream 230188 16439374 ~ 16440965 (-)
LOC120563869 frmd5,LOC104917831,LOC102299895,LOC106561170 other upstream 487909 16697095 ~ 16763718 (-)
trnah-gug_10 NA other upstream 555529 16764715 ~ 16764786 (-)
G85435 NA other upstream 598870 16808056 ~ 16808416 (-)
fbxl22 fbxl22 other upstream 1416825 17626011 ~ 17645520 (-)

Expression


Co-expression Network