G85253 (LOC104921699,LOC103367513,LOC104941665,LOC101473242)


Basic Information

Item Value
gene id G85253
gene name LOC104921699,LOC103367513,LOC104941665,LOC101473242
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 16275651 ~ 16277412 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU114820
TCCACACAAatgaaaatcacattttatgCTTTATTTAAATCCTTGTAAGACATAAAACAAGGTTTAGACAAACAATGCAGGACCCATAATTAATTGATTAAACATAGCAGAGCTCATAAATATAGGAAACACTTAGTTTGGTCTTTTAATTTACGGTGTTTAGACTTGAATTACTACAAAGATGTAGGTTTTACTTCAACATGATTGAGCACTTATCAGTCACTTTTTCCACCGACACAAATGTTTCACTTGTGAATTGAAGAGCTTTTTTCAACCTTTGGTCATTATCATGACTAAAGGCACAATTTGTGCATagaatttcttctttttaagcCACAGCTTAAACATATTGCATACCTTGCTGCACACAATAGTATATTACATGTCAAGTATCTGTATAATGATTAGGAGGGTAATTCCATCAGTCTTGTGTAGCTTGACCTCAAAACCTGTcaccaaaaaaaacatctgtatcATTGTTTTGTGTCCATGAAGCTTAATGGCTTTTTTCCTTCTCTGGAGTCTTTCCACACTTTTTAAACGAAAAGCAACTCCCATCTCTGCAGTAGACTCAGGAGACTTCATTGTTACCTTTGGCACATTAACATGGTAAAAGTTCACTGACAGACTGTGATATCCACCCAGTCAAACACACATAATGCATAACCTCTCTTATGCACATCTTCTGTCTTCTGTCGTGGTCTGACTAAAAAGAGTCTGTCCGTCTTCTGGCAAACACTGCAGACATGCTTTTCACTATGCCCCTGAACCCCAGAGGCTTCTTCGTTGTCAGCTTGGTGTCCTTCACCCTGTCCAACAGCCCGTGAAACACCATGAGCACGCTGTGATAGTTCTCGGCCGCTGACACCTCATAAAAGAGGCAGTCTGTGTTGAGAGCCAGCAGCCGGCCCTCCTCGCTCAGCACTGTCCGCCTGTGGTGCAGGTCCCTCTTGTTACCCACAATCACTATGGGTGCTTTGTCTGCTTTCAGGTAGTCTTTAGTGGACTTGATGGTCTGAATGAGCCTGCTGACAGTGTTGAAACTGGCCCTGTCGCAGATGCTGTAGACAAGAACGTAGCCGTCTGCCCATTGGACCTTCTTCTCAAAGAGTGACGTCTTAACGGAAAAatcCTCAGAATAAGGTGAATCCCAAACATTGAG

Function

NR:

description
PREDICTED: ras-related and estrogen-regulated growth inhibitor-like protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU114820 True 1162 lncRNA 0.42 2 16275651 16277412

Neighbor

gene id symbol gene type direction distance location
slco3a1 slco3a1 coding downstream 21563 16213775 ~ 16254088 (-)
nr2f2 nr2f2,LOC107388818,LOC100705923,LOC108230091,LOC102227842,LOC104957255,LOC106930729,LOC105023478,LOC106573769 coding downstream 463652 15802424 ~ 15811999 (-)
pgpep1l LOC103364746 coding downstream 811937 15456807 ~ 15463714 (-)
cd9a NA coding downstream 957806 15310877 ~ 15317845 (-)
syt1b syt1,LOC100710649,LOC102779835,LOC103358504 coding downstream 971371 15298687 ~ 15304280 (-)
LOC120563512 LOC104964038,LOC103375536,LOC102794895 coding upstream 103531 16380943 ~ 16409443 (-)
zgc:162879 LOC104964034,LOC103368560,LOC100692867 coding upstream 174621 16452033 ~ 16461232 (-)
sema4ba sema4b,LOC103368553,LOC100693140,LOC101470126 coding upstream 185143 16462555 ~ 16549024 (-)
LOC120563779 NA coding upstream 252030 16529442 ~ 16532441 (-)
idh2 idh2,LOC104917827,LOC105932345,LOC107100590,LOC103147849,LOC103466626 coding upstream 304096 16581508 ~ 16594186 (-)
G85250 NA non-coding downstream 17416 16257975 ~ 16258235 (-)
LOC120563424 NA non-coding downstream 227410 15858841 ~ 16048241 (-)
G85125 NA non-coding downstream 802794 15466582 ~ 15472857 (-)
G85121 LOC103364747,LOC103358513 non-coding downstream 816738 15455655 ~ 15458913 (-)
LOC120563610 NA non-coding downstream 819097 15455840 ~ 15456554 (-)
G85312 NA non-coding upstream 93589 16371001 ~ 16372919 (-)
G85319 NA non-coding upstream 184150 16461562 ~ 16462518 (-)
G85328 NA non-coding upstream 251195 16528607 ~ 16528849 (-)
G85331 NA non-coding upstream 275994 16553406 ~ 16553633 (-)
G85332 NA non-coding upstream 276624 16554036 ~ 16554811 (-)
st8sia2 fam174b,st8sia2,LOC100690985,LOC101474125,LOC102798331 other downstream 66465 16188853 ~ 16209186 (-)
chd2 chd2 other downstream 88315 16155984 ~ 16187336 (-)
G85133 mef2a,mef2aa,LOC107553916 other downstream 731569 15514778 ~ 15544082 (-)
ttc23 LOC104957250 other downstream 791506 15472934 ~ 15484145 (-)
G85014 ppp6r2,LOC103370604 other downstream 1202301 15066039 ~ 15073350 (-)
G85321 NA other upstream 161962 16439374 ~ 16440965 (-)
LOC120563869 frmd5,LOC104917831,LOC102299895,LOC106561170 other upstream 419683 16697095 ~ 16763718 (-)
trnah-gug_10 NA other upstream 487303 16764715 ~ 16764786 (-)
G85435 NA other upstream 530644 16808056 ~ 16808416 (-)
fbxl22 fbxl22 other upstream 1348599 17626011 ~ 17645520 (-)

Expression


Co-expression Network