G85799


Basic Information

Item Value
gene id G85799
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 17829508 ~ 17834884 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU115558
ttaatagtttATCCCTCGGCTCTTTGTACTAAACTTAAAATTGGAACAATTTCCAATATCATAACCACAACTGGCCATGCCACCAGCTGGTATGGAGAAGTCTAATTACAGGATGCAAAGTCTCAGCTAATATCCTACCTTTAACTCATGCAACCTTTGGATTTTAGCATTTATCACTTTTAGCATGCAAAGTAAAATTAGATTGCTGTACTGATAAAGAATTCAAACAATAGTGAATACTGTGAGTTGAATTAATGGCACTGAGATACATTCACAGATTTATATCTGTGGTTGTAGAAGGTATGAGAAAATATTAATCATAGTACTTTATAACACATAATGTGATCACATTTTGTGATGTCAAGTTAGCCATCCTCCTTTTCTTTTGCTAATGTGTTAGCCAAGGCAGTTAACAGGGTCTGAAAAAACAATTAGGAAAAGGATTAAAATGTCAGTCTGTGACAAGGTCTCAATTAGGGGTAATTTTGTATTAAACAAGTTAAAATGTCTCTTAAATCTCCAATGCAGTATAAAGCAAAGAAACAActttcacacaaaaaatccCTATCGTAACACCACAACTTAAACCTGAACACACATTCGGCTATTGCATCACAATCCTGGTGTCATTGTGGGACTCACAGTGTTGGGGAAGTTCAGATAGCAAATCTGACATGGCATGTCCTGTGCCGATGATCTAGTGTTGATTGGAGGACGGATCCGAGGCTTCTTACTGGGGTTAATGACATGACACTCCGAGAAAAGCTTGTCCAGGTTACCATCAAATACCTTTCCATAAGCTTTTCTTTATCCCAGTTGAAGTGACTGAGGAGGATGCGTGTTATTGTTGCAGGATTCTAGAGGAATGAGAAATGATTGGTTGGTCAGAAATAAGCCTGAAGTTTACATTTAACTACTGCCAATATTCACTAACACAAAAAGAGGGTACATTTGACATGAAAAGACACTACCACCACTACAAACTACAGCCATAGAAGTAACATAAAGGTAGTATTCACCACAGGGCTCTTTTACTGGATTGCATGACACTGAAGAGGAGTTTACATTTTTCTGTTCACAGTAGTTACTTAAGGCAACTATGGCCAGCAATTAATTCCAAATGAAATACAAGTTTTAGATTTTTGCTGTGTCTGTAGACTTTTCACAGGCAAAATGGCAACAGTTTATGATGCAGTAAACCAGAACACTAGATATTCGAAAACATCTTAGTGCACCTTGCCTGTGACTGGACAGGTGATGGTGTATCAGAGGAAAGTGAACACGCCAGCTTGCAGTGATTGAAACCAAATGTGGTGCATTTTACTGGTACAAACATATAAATATGTTTTCTTTAGAGTGTACTGTCTGCCTAATTGGTTAAGCTCTGGCAATTCTGAATGAAAGGCCAACAAAGCCAAATAGACACCTGTCCAAAAAATACATTGAATGGAAAAGTTCCATCGCATAAATTTCACAGCAATCCTATTtctagtaggggtgggaatcaccagaggcctcatgatacgatatcatcacgatacctatgtcacaatacgatattattgcgattttaaacatattgcaatattctgcgatatattgcaatgtattaccttttttccaacttcaaatttttcccaatttcaaatgttgtCCCCAAAGGAAGGAGCACTCACAGCGCTATGGAGATAGGTCTTGCAATGAGAGACTATGCTATACATAGAGCTTGTAGTTGTTGGGCCCTGCCATTTAACATACAAGGCTAATCTATCCTGAGCCACCAGAATAGCTTTAGTGCACCTTGGCATAACTTCTACAAGACTATAAGTCCATGTAGTAACATGCAGAGATATCGGTCATATGTTGCTCCCATCAGTTTTGTGCTCTAGATACTGCATTCTACCCTAAAATTTTGACTTAAACGCAGTGTGCGAGTATTAACCCTTTCACACCGATGGCTCAACCAGGGTTATACCCAGGTCgactgtgtgtttgaatgaGTTAACCCTCCCCAATCCATTCTGCTTCGCGACCCAGGTCACCAGATAGGTTAGGTCAGGGTATGACAAGGGTCGATTTCAATGTGAATTGCGCGACTTAGGTCACTACCAGTCAGGGCGGAACAAATTATGTTATTGGTTGGAAATGACAGTGGGGCAGTCGTCACCGATCCCCGCCTATGGTCACCGCACACTTTGAAAATATAACATAAATTTAGTCTCACTGTGGTTTATGCTGGGTTTTCACTgtagactgtataaaactaaGATTTTTACAGGCAGCTTCAATAACAGCAGAGCAGGTCAATTCATTTTTGAACAGTCCACTTACAATGAGTGCCCAGGTGTTCACTAGTCTGCCCCAGCAGAGCGGTAACAgagttttacttttaatgaaatcaaacagagaaatgttctcGTCTTAAAATAGTCAAACATTTTAACTAGAGTAACATTCTTCCTTTTCCAGCTGCTGCAATATGCAGGAGGAGAAATCAGTCTGTACATAATCAAGTGTTTAATGGTGCTTTAGAACGTAATCACTgcgaaacaaaacacaaaataagctTCATTTCTCTCTCCCTAATGTACAATGACAAAGTCAAGTAGCTACAAAACATTAGTTCTTGTGGTATACAGATGGACTGGGGTATGTGACAACTTAGCTGTtcactagtctatatcaacgacatCCCActtgtgggattgttcaggtgccgccggaaattccaccagatgtcCCTGCTTTTTAGGCCAGATGTCCCACACCTTCCgccttctttgtgttggcattttaaactccggtggatttatgaggactatggttaactgctgcgcagatctctgcagggtgaatcGAGACAGCAAGCtaaactatctgtccaatctgagtttcctgttgcacgactaaaacaactttttaatgatcacacgttccaccaaaacaagttccctccgaggctattttgcagaggcaccttcaTTTAGTCCggggcttagcgccacccaagacgattgtgattggtttaaagaaatgccaattaaccagagcacatttttctcccatcccagaatgctatgtggactagccagaccctcctccgaagcgctgtggaggtaggtctggcaattcGAGACTAGCTGGTAACTGAATATGACGTGTAAAGCCCCGCCCATTTCTAGCACTTAAAGTAATTGTTATGCATTGCTCCCGGGTTGTGACCCAGGTGATCTCTGAATTGtcataataatttatactttattaatcccgcaaggaaAATTACAAAATCATGACCAGGGATATACCCAAAAGAAGAGTTGAACACTGATCAAACAACCCTGGCCCAACCATGGTCAGTGGTGTGAAAGAGGTATACGTATGTGagcagcagtgtttcctctaggttttttttaagcagtgggggcagatctgtcggaACCCCCCCGCCgccaaatgttttacgtattaaACGGAACTGActcttcgctgcaacacaaacacatatatttattcacctctgttcacacacaatgagccatattttcatttcgttttgattgaactgtatttttgaggaactgtaggtctacaaaataaattttacaatatattcttcatagggaaaccaaaacccaaagtaggctatagtatgaaACTAATTGtatatttgcctcagtggcaaagttggcagccttgctgtgtgcattttatttttcttggcttttggaaaaataactccaatGCTCGTTATAGGGGAATTCAGAAAGAGGTGGCCCATTAATGCTGAGTAGCATACATGCTGCTAGATGGTACCCCAGTGACCTGGACGGTCATTTTGactgttttgaaatttatatgtgtaataactttgctaaataaaaaaatacaatcctgctggtacctgacttttcctaaaagagtctgtattttcatttaaaattgtttttaggttatatacattacacataaggcaaagaaaatacaatcactttgacctattttggccattttcGCAGTTTTGttcttttgcgtggttgaagatgcatcttggttgcttagtaataatcatagtttctgtcagagaaacgtaactagcggtcttgagtaacaagtgtgggcattaAGGTGGTAAgtaggcagaagagagatagagaaagaggaagcagatgtgttgtagatgcaaccggagcagagttagtggctattcattttataacgtgGGCCCTGGAGGTAATGAGTCTccgctggttttctgatcacggtcggaaacgaagcaaTCAGGAGaggttaacccattgaacattttaacagcttattaacgtgcgcttgttgtcccgtgcgctgatgcgctcatctgttgacatttccgaatgccttcctacagttgcttaataaaaaaaaggctttccacacaaacaaacgtagcctacatgtgtcattagtatgagaggaaaaaaatgagattttaactgtgtcgggcttggacacaaatttcttaatgcctgtcgggttCGGGCCGGGTTcagtcacggctctgtcgggcGCGGGCCGggcagaaaaattcggcccgatctgGACTCTAGTGGGCATCACtgatgggccgaaggcaaagccagagtcggtaacgcaggcgtggatggactctgttctgaatcagaagaaaagcaccaggcgctcgctctgtgaaaggcgccGTAGGCCTATACGTAGCATAGATGGCCGgtagctgtctacgtgttcatataactttatatatgctacaactggctggactCATTACgcacatcctctccaaggagcgcaccagctgtaaaatgtcccggaggaagttcatgcagcaacttcaaactcggtctgtgccatcttaagatgttaaaggtgaaaagttgttaaaagaaaaactcatagggcgtggccgtggcggggcagccattttgtgcgtttcgctgccgaaacaggaagtgggtgtaagtcgagtgtacgttgtccgattacctcgaaacttttcaggattcataagagtccaaccctgaggacaaataaaggccgatatttacttaaagtcatagcgccccctggtggcaacaggaagtaggcctaaaagtcaaggtgctatactttaacgaactcctcctacagatttcatccaatggtcttcaaacttggtctgtaccatcccaacaccttaacgatgaaaagttattaaaagaaaaacttttcgtcagacggtgtgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU115558 True 5234 lncRNA 0.41 2 17829508 17834884

Neighbor

gene id symbol gene type direction distance location
hexa hexa,LOC102299697,LOC102797931 coding downstream 10573 17811551 ~ 17818935 (-)
nr2e3 nr2e3 coding downstream 25681 17800703 ~ 17803827 (-)
stoml1 stoml1 coding downstream 30121 17796035 ~ 17799387 (-)
LOC120563763 LOC100692956,LOC102798821 coding downstream 33601 17792647 ~ 17795907 (-)
stra6 stra6,LOC102799117 coding downstream 88203 17724192 ~ 17741305 (-)
c8h15orf39 NA coding upstream 11346 17846230 ~ 17856728 (-)
ints14 vwa9,LOC102797047 coding upstream 46524 17881408 ~ 17886727 (-)
megf11 megf11,LOC103353722,LOC102795465 coding upstream 97321 17932205 ~ 18006530 (-)
LOC120563782 rpl4 coding upstream 196064 18030948 ~ 18032194 (-)
LOC120564816 NA coding upstream 196305 18031189 ~ 18031256 (-)
G85711 NA non-coding downstream 87502 17741692 ~ 17742006 (-)
G85660 NA non-coding downstream 172137 17657145 ~ 17657371 (-)
G85613 acsbg1,LOC102779547 non-coding downstream 285103 17544155 ~ 17544405 (-)
G85601 LOC101478969,LOC102214964,LOC102308915,LOC100701437,LOC102780768 non-coding downstream 312341 17515903 ~ 17517167 (-)
LOC120563415 NA non-coding downstream 733745 17090105 ~ 17095763 (-)
G85802 arih1,LOC107662282,LOC107591299 non-coding upstream 7216 17842100 ~ 17845786 (-)
G85806 NA non-coding upstream 53983 17888867 ~ 17892467 (-)
G85815 NA non-coding upstream 181223 18016107 ~ 18016774 (-)
G85910 LOC103141279,LOC103380252,LOC107097849,LOC106536919,LOC102790651 non-coding upstream 508658 18343542 ~ 18344341 (-)
LOC120564122 NA non-coding upstream 840379 18675263 ~ 18677985 (-)
fbxl22 fbxl22 other downstream 183988 17626011 ~ 17645520 (-)
G85435 NA other downstream 1021092 16808056 ~ 16808416 (-)
trnah-gug_10 NA other downstream 1064722 16764715 ~ 16764786 (-)
LOC120563869 frmd5,LOC104917831,LOC102299895,LOC106561170 other downstream 1065790 16697095 ~ 16763718 (-)
G85321 NA other downstream 1388543 16439374 ~ 16440965 (-)
ppcdc ppcdc other upstream 26829 17861713 ~ 17877065 (-)
dennd4a dennd4a other upstream 58969 17893853 ~ 17956629 (-)
trnaq-cug_6 NA other upstream 92163 17927047 ~ 17927118 (-)
G85813 rpl4 other upstream 196124 18031008 ~ 18036276 (-)
lctlb lctl,LOC104967861,LOC107388717,LOC106956364 other upstream 206744 18041628 ~ 18047840 (-)

Expression


Co-expression Network