dennd4a (dennd4a)


Basic Information

Item Value
gene id dennd4a
gene name dennd4a
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 17893853 ~ 17956629 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU115571
ATACCATTGTGCCCTGATAAACTAAAGCCGGGGTAATTTAAACATGAAACATAACTTGCCCATTTTGTAATGTAATTGAGCTATTTGTAATAGCTTTGTTAGACTCTTGAGATTGATACTCCACCAAGATTGTATAGTTAGACATTTGGATAACAGTGCACTATTTAATGTGacatacagcaaaaaaaaaaggcatttcaaATTTCTTCGATGATTGTGCACGTTTCTTTGCACTGGGTATATTAATATGTTAATGTCAAAGGTGTTACGTTAAGACAACAGCTCTGACCTGCCCTAATTCAAAATCACTTCCAATAATGAGTGTGATGGTTCACTATGTTAATATTGTCTTTCACTTTTAACTGACAAAAGCCTGCCTGGAATGGTAGTAATGTGATGCCGCTCTACAGCTTATTACTGGACTTCACCACAATAAATTATGATGATACGATGCTGGATAAGACAAGGCTGTGTGCTTGGAATAAACACCAATATCACAGTATGTAAATTTGCATTTTAATCACCTTGTAAGTTGGGacgaaaacaaacaaacactgatGACCAAAACATTTGATGTTTACATGTTGTTTACACAATTTGtcaatttaaacaatgtttatgaagtattatttttcatttgtaacACAGATACTAATTTGTAtgatttttatataaaaaagaaatcaaatgtCTT
>XM_039809884.1
ATTCGTCCATCACACTgggaacaattttttttatgataacagatttagacagagataaaaataaaaaaatatatgaatagACGAAGCAAACACAGTGAGGAATAATATTTCTATCAACAGAAATCTGGGCTTTGTTTCGACATAGGCTCATATTCGACAGATCATCTTTCAATCGAGATCCCACAGTGTGGGTATGGGAAATGATGGAGGATAAAGGTCCTCGAGTAGCCGACTACTTTGTGGTTGCTGGTCTCACCGACTCGTCCAAGCCTCTCGAGGAGGAGCTCCACTTTGATGATGCCGGTCCCAAGTCTGTGAAACCAAAAGCTCCCATCACCGACGTAACTGTGGTGATCCGCTCCCTCGGTGAACAGGTACCCCCGGGTTTCACCTGTATTGAAAGCACCCCCTCAGGCCTCTCTGCAGAGCTCAATGGAGCCAGCCTCAGGGGCCCGCAGATATTCTTGTGCTTCAAGCGAGGCAGAGATAAGCCTCCACTGACAGATCTCGGGATTCTGTATGAGTGGAAAGAGAAACTGAAACCTGGATGTCACATCGTCCAGACCACGCCCTCAGGTCGCCCTGCCAACATTAGCAGCTCGTCGTCCCAACGCATCTACATCACCTACCGCCGCGCACCGAAGAGCCAGCCCCATACTTCACTGGCTGTCACTGATGTCTGCATCATCATCCCCGGCAAAGGGGAGACGCCCCCTCACACCTTCTGCAAGGTGGACAAGAACCTCAACAGCAGCATGTGGGGATCCTCAGTCTACCTTTGTTATAAGAAGTCTCTGGCTAAAGCAAACACAATCGCGTACAAAGCAGGTCTGCTGTGTAGGTACCCTGAAGAGGACTACGAGTCCTTCCCACTGCCTGAGTCCGTGCCTATGTTCTGCCTGCCCATGGGAGCAACGGTCGAGTGCTGGCCAGCACACACCAAACACTCCCTGCCTGTGTTTTCCACATTTGTTCTGACGGGTGCCTCTGGAGAAAAGGTGTACGGAGCAGCCATCCAGTTCTATGAGGCTCACTCAGAGGAGAAACTGTCTGAGCGTCAGCGCACACAGCTCGGCCTGCAAAGCTCTGATCTTGGACCTGATGGGACCAGGAGTGTTTACAGCAACAAGAGCATCTGTCTGCTCTCCCACTGGCCCTTCTTCCAGTCCTTCAGGAGCTTTCTCACTTTCCTCTACCGATACTCCATCTCTGGACCACATGCCCTGCCTATTGAAAAGCACATCTCTCACTTCATGCTAAATGTGCCATTCCCCTCCATTCAGAGACCACGCATCCTAGTGCAGCTGTCTCCACATGACAGCCTGATACTGAGTCAACCTGTGTCCTCTCCACTGCCTCTCAGTGGTGGAAGCCTCTCCACATTACTACTGAATCTGGGCCCAAAGAACGCAGCCACTCTGCTGGTGCTGGCTGTCACAGAGCACAAGATCCTGGTTCATTCCCTACGTCCAGCTGTGCTCACAAGTGTTACAGAGGCCCTTGTGTCTATGATCTTCCCCTTCCACTGGCCATGCCCCTACATCCCTCTGTGCCCGCTGGCACTGGCCGGTGTGCTCAGCGCACCGTGCCCTTTCATCGTGGGTGTGGACTCCCGATACTTTGACCTTTACGTGCCCCCAGCTGACATCAGCTGCGTGGATCTGGACACCAACACAATCTCCCAAAAAGACGACAAGAAGGCTTTAACGTGGAAAATCTTGCCCCGGAGAGCCTGCAAACATCTTCTGAATACCCTGAATAAGCTCCATCAGCAGCTCACTGAGGGTGGTCAGTTGAACCGGGAAGATGTGCAGATGGAGCACACAGTAACTGACAATGAGCTCAACGGTGGGAAAAGCCTCCACACTTTGGAGCTGGAGATCCAGGAGGCCTTCCTGCGCTTCATGGCGGCCATCCTACGAGGCTACCGCTCCTACCTGCTGCCCATCACCCAAGCCCCCTCTGAGAAGACCACCGATGCCAGCTCCCTCTTCGACATCCAAGGCTTCCTGAAGAGCAGAGACCGCTCCCACCAGAGGTTTTACTCCCTCATGACCAAGACTCAAATGTTCAGCCGTTTCATAGAGGAGTGCTCCTTTGTCAGTGATAAAGATGCCAGCTTGGCTTTCTTTGATGAGTGTGTTGATAAGCTATTTACCACTGCAAGCAAGATGGACAGTGAGCGACCAGAGGAAACCAGACTGATTGAACTGGATGAATCCCACCGCAGTGAGCACACGGTCTATATCAACCCTCCAGAGCTGCCTCCACTACCACAGGGAGAAGAGCATCCTCTGTGCTATAGCTACTCTGGGTTTCCTGTGCTGAATGCTGAGCTTCTGGAGCCGCTGGAGGGACCAAATCCTCCATCAACAGGCCTGGCCTCACGCCACAGCAGCCCAGCCAGCCCTACGGCCATCTTTAGGCGTTCTAAACAGGAGATCAAATCAGCTCAAAGGATGGCCAAAACCTATTCATCTATGCCTCAGATGTGGTCTAAGTGTCTGCTGCGCCACTGCTATGGCCTTTGGTTCATCTGCCTACCAGGGTTTGTTGGCACCTGCCATTCAAAGGTGCGGGCTCTGCGTACAGCTTACGATGTGCTGAGGAAGATGCAGGACAAGAAGTTGCAGGCTCCAGATGAGGTGTGTTACCGTGTCTTGCTGCAACTGTGTGGGCAGTACAGCCAGCCAGTCCTTGCTGTCAGGGTGTTGTTTGAGATGAAGAAAGCTGGAGTTCAACCCAACGCCATTACCTATGGGTACTACAACAAGGCGGTGTTGGAGAGCACCTGGCCCTCCACCACCAGAGGAGGCTACTTTTTGTGGGGAAAGCTGAGAAACGTGGTCCTAGGTGTGCTCCAGTTCAAGCAAGCGGGGAGAAAACAACAGACGCCGCACAGAGACCCTCATCTTTCAGACGGCAGTGATCTTGACACAGTCAGTCATGGCAGTTTGGACAGTACTAATGACTCTGCTGAGCGCACTTCTATCGACACTGACTTCACTAAAATGGACTCTAGTGATGATGGATTTAGTACAGGTGGACAGTCAGACCAGGGCTATGATTCACTAtccaaagaggaggagaggatgtgCAGCAGAGAGAGTGACAACACACTATCGGTGGAAGACAAAGGCCAGAGGCAGTCCACACCTGAGACAGAGGTTCCAATCTGCGGCATCTCTCCTTCTACTAGAAGCTATAAACCCACAGATGTCAGTACAGgCAATGGCAACAGGTTGGTTTCCAGACCATCTAGTGACACCATTCTGTGTGGAGTTCTGCCAAAGAAAGAGAGGCCAAAATCTCTGGACTTGTCTGGTGGACAAGGAAGTCTAAGACTCACTGTCCCTCACCTTGGCTCAACAAAGCAGCATTACCTAGCTGGTGACAGACTGCACGAGGtagaagaagaggagacagagactgATAAACAGAAACCTTTGGTGGAGAGAAGTATCTGCTGCAGCGGTGCAGTGGAGAGGCCAGGTGTGTCTTTAGAGAGGAGTGTCAGCTGCAGTGATGGGACTGTGAGGAGAACGGGTGTTGAGAGGGGGTTTGATCCCCTGTCACTGATGGCGACAGATGCGGTACAAGAGTGTGACCGGGAGAACAGTGGCACAAACACAGCCCGCCGCGACCTCGCTGAAGAGATTGAGATGTACATGAATAATGGAAACAGCCCTCTGAGCAGCCTTAGCATCGTCTCCATTTCACACTCTCCACGGCCCTGCTCCAACACACAAAAACCCACTGTCGGAATCAAAGAGAATTCGCAGGATCgcccctctcttcctctggcTGTCTGTACCAAAAACAGGGAGAGGCCTTCCTCCTTGGTGTCACCCTCATcaccttctccctcctcctcatcattcTCCATGGACTCACTGTTCACGCCAACTCTGGACATCTTCAAGAGTAGCGTCATATCAGCAGGGAAGGGCGTGGCTGAGAAGGCTAGCCGTTTCTACTCTCGTCTGTCCTCCCAGACTTCATTAACACAGGATGCAAACTGTGACCAGATTAGTGTATCCTCGCTGACCTCAGGAGAGGCAGACTGCTCCTCGCTGCTTGATCATGACTCCTGTCTGGATCCAGATGGCTTTACCTCCCCCCAGCACGGCAGTGTTTCCCGACTCAGGAGGAGCCCGGTTGTGGGTCATACCAACCTGGGCAGCCCCAGCACCCCCAATAGAGTGTTCAGACACAACTCCTTCTCTGGTGGTTTGGCACTTGCTTCTAAAACCCCTCACACTCCAGATTCCTCCCCCGACACCAGCCGATTCCAACCCGCTCCCAATTACACCATAGAGGTGTTGATGTCCAGCTGTTCACTTTGTAAGACGTGTGACTGTCTGGTGTATGATGAGGAGATCATGGCTGGCTGGACAGCAAACGACTCCAACCTCAACAGCACTTGTCCCTTCTGCGGCACAGCCTTCCTGCCTTTCCTCAATGTGGAAATCAAAGACCTGAGACCACTCAGCAGGTCTTCTGTGGAAAGTAATCCTGTTAATGAGGAGGTCACGTTGCCGACTCTCAATCCAGAGGCCAAAATGTCTGCAGCAGACTGTGCAGCTCAGTCATCTGCAGCTACCCCCCAGAAGCAGGGGAGCAGCGGGAGTGCTGGGCTGGCTCCGGTGACGGTGCCCTACCTGAGCCCTCTGGTTCTGTGGAAGGAACTGGAGAGCCTGCTTGTAAATGAGGGCGACCAGGCCATCTCCTCCCCGTGTGTTGTCGACCAACACCCCATCGTCTTCTGGAACCTCGTGTGGTACTTCAGAAGGCTTGAGCTGCCGAGTAACCTGCCGGCTCTTATCCTGGCCTCCCAGCACTGTAGCCATGGAGACCAGACTCCTCAGAGCGTTTCATCCGAGGATAGTAAGCAAGTGCTTGTGAGGATTATGTGGGACAACCTGAAGTTACACAAAGACAAAGTTCaaccctgctatgtcctgtgGAACACACATTGTGCAAACTCCTTGGTTCGCTCTGGGCTGTGTGAAGAGGGCCAGCTCTTCACTGTGGAGCTACTGCAGGGTTTTGTGAGGAGCATTAAGAAGAGTGATGTCTATCAGCCCATGAGCCAGATCATCCAGCTGTTGGGGCCAGAGCTGGGTTTTAAAAGACAGAGGAGCCTATACCGAGATTTATTATTCCTTGCTCTTGTGGCTTTGGGAAAGAACAACATTAATATCAATGCTTTTGACCGGGAGTACAAGTTGGCATATGATCGCCTCACCCCCAACCAGGTTAAACTGACACACAACTGTGACCGACCCCCCGGAGCAGGGGTCATGGAGTGCAGGAGGACTTTTGGGGAACCAAGTCTGTAAACTAGTTCTCTTCTTTTGCCCCATTATATTTTTCCTTCACGTTCCCTGTTACTGTTTTGTCGGTCTGCTCCTCAGACTCAGGACCAGCTCACCTGAATGGAGCACAGAGCTCTTAAGCACAATGTGAAAATGACACTTAATATAAAGCAACTGCCATGCATTTCTTGTATACTGTTAGAGGTGAGAGGCCTGGAGTGACGAACTTGTGTTTGTAAATAATTAGAAAATCCACTGTATTTTCCATATAATTATTAATGTTTGTACAGTTATTATACAGTCCACAGTACAACTGTGGACAACTGTTTCAGTTGAAGCTGTGAGTAAGTATGTAAAAGTAAGTGTATGATCACGTTGTTGAAATTCACAAGTGGTCCTGGTGACCTTGTCATGActgctgttgagtgtgtgtataaTCAGTCCTTGCTTTTAGACATTTGAGTTTTTACAAAACACTTTGACAAGATGAGCTTGCCATTCATTCTCATTTATGTAATGCTGTGGCCCAGCAGCATACGCTTAAATGGCTTTTTATTTGGCAGCTGCAGGACTTACTGCACTGTTGATATTTTCATTACATGCAGTGAATGAAAGCAAAGAAATTCCTCCTCATCTGCACCCTGTACTCATAGCAGGACCATGATCATGATCATATGCCTGAATACACTAAACTAGACAGTAACATAGAAAAAACAGTACCATTATAAAACATATTTCTAAATCATGAAGGGAGTACTCAATGTTTTTGTATATGCACAATGTTTATTCGTTATCCTTTTTTGTACAATGTACCAAAAGAACCCAAAAGGGAATAGTACTAagatttatttacagttttttaaacaataccTTTTTAATGTAAGGATTTATGTTATATGGGACCACAAAGGATAGATTTCCTTAAAAACAGTACAATCAAACTAATAGTagatgaataaaaacaaaatgttttctgttggtttaatcaacacattttttttgatAGAgaaattaatttatacaataatgGATCTATAAATATGTAgtatttgtatattttctttAGGTATTCACTGTATAGTGTAGATGTCAGTTTTAGACATTTGGATAACAGTGCACTATTTAATGTGacatacagcaaaaaaaaaaggcatttcaaATTTCTTCGATGATTGTGCACGTTTCTTTGCACTGGGTATATTAATATGTTAATGTCAAAGGTGTTACGTTAAGACAACAGCTCTGACCTGCCCTAATTCAAAATCACTTCCAATAATGAGTGTGATGGTTCACTATGTTAATATTGTCTTTCACTTTTAACTGACAAAAGCCTGCCTGGAATGGTAGTAATGTGATGCCGCTCTACAGCTTATTACTGGACTTCACCACAATAAATTATGATGATACGATGCTGGATAAGACAAGGCTGTGTGCTTGGAATAAACACCAATATCACAGTATGTAAATTTGCATTTTAATCACCTTGTAAGTTGGGacgaaaacaaacaaacactgatGACCAAAACATTTGATGTTTACATGTTGTTTACACAATTTGtcaatttaaacaatgtttatgaagtattatttttcatttgtaacACAGATACTAATTTGTAtgatttttatataaaaaagaaatcaaatgtCTTCTTTGGCTGGATCTATGGTTTGCTTTCATTtatgaataaacacatttaTTCTAA

Function

symbol description
dennd4a Predicted to enable guanyl-nucleotide exchange factor activity. Predicted to be involved in regulation of Rab protein signal transduction. Predicted to be active in cytoplasmic vesicle. Orthologous to human DENND4A (DENN domain containing 4A).

NR:

description
prisilkin-39-like isoform X37

GO: NA

KEGG:

id description
K20163 DENND4; DENN domain-containing protein 4

RNA

RNA id representative length rna type GC content exon number start site end site
TU115571 False 694 lncRNA 0.33 2 17893907 17956629
XM_039809884.1 True 7024 mRNA 0.48 32 17893853 17921248

Neighbor

gene id symbol gene type direction distance location
ints14 vwa9,LOC102797047 coding downstream 7126 17881408 ~ 17886727 (-)
c8h15orf39 NA coding downstream 37125 17846230 ~ 17856728 (-)
hexa hexa,LOC102299697,LOC102797931 coding downstream 74918 17811551 ~ 17818935 (-)
nr2e3 nr2e3 coding downstream 90026 17800703 ~ 17803827 (-)
stoml1 stoml1 coding downstream 94466 17796035 ~ 17799387 (-)
LOC120563782 rpl4 coding upstream 74319 18030948 ~ 18032194 (-)
LOC120564816 NA coding upstream 74560 18031189 ~ 18031256 (-)
LOC120564814 NA coding upstream 74839 18031468 ~ 18031539 (-)
LOC120563379 rpl4 coding upstream 75899 18032528 ~ 18036350 (-)
LOC120564818 NA coding upstream 76329 18032958 ~ 18033025 (-)
G85806 NA non-coding downstream 1386 17888867 ~ 17892467 (-)
G85802 arih1,LOC107662282,LOC107591299 non-coding downstream 48067 17842100 ~ 17845786 (-)
G85799 NA non-coding downstream 58969 17829508 ~ 17834884 (-)
G85711 NA non-coding downstream 151847 17741692 ~ 17742006 (-)
G85660 NA non-coding downstream 236482 17657145 ~ 17657371 (-)
G85815 NA non-coding upstream 59478 18016107 ~ 18016774 (-)
G85910 LOC103141279,LOC103380252,LOC107097849,LOC106536919,LOC102790651 non-coding upstream 386913 18343542 ~ 18344341 (-)
LOC120564122 NA non-coding upstream 718634 18675263 ~ 18677985 (-)
G86064 NA non-coding upstream 800423 18757052 ~ 18761076 (-)
G86072 NA non-coding upstream 810866 18767495 ~ 18769138 (-)
ppcdc ppcdc other downstream 16788 17861713 ~ 17877065 (-)
fbxl22 fbxl22 other downstream 248333 17626011 ~ 17645520 (-)
G85435 NA other downstream 1085437 16808056 ~ 16808416 (-)
trnah-gug_10 NA other downstream 1129067 16764715 ~ 16764786 (-)
LOC120563869 frmd5,LOC104917831,LOC102299895,LOC106561170 other downstream 1130135 16697095 ~ 16763718 (-)
G85813 rpl4 other upstream 74379 18031008 ~ 18036276 (-)
lctlb lctl,LOC104967861,LOC107388717,LOC106956364 other upstream 84999 18041628 ~ 18047840 (-)
tmem258 NA other upstream 542690 18499319 ~ 18502866 (-)
syt7a LOC102215913,LOC101470916,LOC102782335,LOC103466506,LOC103141308,LOC107388681,LOC100690092 other upstream 657959 18614588 ~ 18696098 (-)
G86194 tph1 other upstream 1050567 19007196 ~ 19010916 (-)

Expression


Co-expression Network