G85815


Basic Information

Item Value
gene id G85815
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 18016107 ~ 18016774 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU115589
aaatattgacaatgtgtcattttgacgtgcaatttcagttttgtgtaatgtgatcatcgtggattataatgtgtaaaactgcaaaaatataattcatgcgtgatggtgatttaaacccaattcacttcaataaagaaaactatacatgttattcttgttatgagcatcaaggcgtggcggcgctgcggtgcaaatccaactcatgtttagtaggctacatgttaactcaaagattcgtagaaaaaatataaacattggaggccattaatcggtgcgcaaagtccttgaaatccattctgcagtaagcatcatatagccatggcaaaaagaaaacattattaattaattttggttttactaagaaactgtgtagcgatgacgttaatagcacgactaattcacctgctgcaagccctgttagcacacctcccaccggggtgacaacgcaagaagaagctgaagaaataatgtcctctctggctgaagatgatcctaacccctctcgctcctctctcccgttaaattggaacagccagcagtggagagcctggaagagcccatatacatggctgtttgttaaggatggaagcttggggtgcgtcgctatggtctaattgaacggaggaattctggtattcttcttattgtttatatatttgtgggtggct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU115589 True 668 lncRNA 0.40 1 18016107 18016774

Neighbor

gene id symbol gene type direction distance location
megf11 megf11,LOC103353722,LOC102795465 coding downstream 9577 17932205 ~ 18006530 (-)
ints14 vwa9,LOC102797047 coding downstream 129380 17881408 ~ 17886727 (-)
c8h15orf39 NA coding downstream 159379 17846230 ~ 17856728 (-)
hexa hexa,LOC102299697,LOC102797931 coding downstream 197172 17811551 ~ 17818935 (-)
nr2e3 nr2e3 coding downstream 212280 17800703 ~ 17803827 (-)
LOC120563782 rpl4 coding upstream 14174 18030948 ~ 18032194 (-)
LOC120564816 NA coding upstream 14415 18031189 ~ 18031256 (-)
LOC120564814 NA coding upstream 14694 18031468 ~ 18031539 (-)
LOC120563379 rpl4 coding upstream 15754 18032528 ~ 18036350 (-)
LOC120564818 NA coding upstream 16184 18032958 ~ 18033025 (-)
G85806 NA non-coding downstream 123640 17888867 ~ 17892467 (-)
G85802 arih1,LOC107662282,LOC107591299 non-coding downstream 170321 17842100 ~ 17845786 (-)
G85799 NA non-coding downstream 181223 17829508 ~ 17834884 (-)
G85711 NA non-coding downstream 274101 17741692 ~ 17742006 (-)
G85660 NA non-coding downstream 358736 17657145 ~ 17657371 (-)
G85910 LOC103141279,LOC103380252,LOC107097849,LOC106536919,LOC102790651 non-coding upstream 326768 18343542 ~ 18344341 (-)
LOC120564122 NA non-coding upstream 658489 18675263 ~ 18677985 (-)
G86064 NA non-coding upstream 740278 18757052 ~ 18761076 (-)
G86072 NA non-coding upstream 750721 18767495 ~ 18769138 (-)
G86195 tph1 non-coding upstream 994151 19010925 ~ 19012081 (-)
dennd4a dennd4a other downstream 59478 17893853 ~ 17956629 (-)
trnaq-cug_6 NA other downstream 88989 17927047 ~ 17927118 (-)
ppcdc ppcdc other downstream 139042 17861713 ~ 17877065 (-)
fbxl22 fbxl22 other downstream 370587 17626011 ~ 17645520 (-)
G85435 NA other downstream 1207691 16808056 ~ 16808416 (-)
G85813 rpl4 other upstream 14234 18031008 ~ 18036276 (-)
lctlb lctl,LOC104967861,LOC107388717,LOC106956364 other upstream 24854 18041628 ~ 18047840 (-)
tmem258 NA other upstream 482545 18499319 ~ 18502866 (-)
syt7a LOC102215913,LOC101470916,LOC102782335,LOC103466506,LOC103141308,LOC107388681,LOC100690092 other upstream 597814 18614588 ~ 18696098 (-)
G86194 tph1 other upstream 990422 19007196 ~ 19010916 (-)

Expression


Co-expression Network