G86400 (LOC101161482)


Basic Information

Item Value
gene id G86400
gene name LOC101161482
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 19383619 ~ 19384007 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU116426
CTCCAGCTCTGCTCCCTTTTCCTGCAGCTGTCTCCGCAGCTCGTCCAACTCCCTCTGACTCTTGTCTCTGGCCTCATCGACTTGGTTCTGAAGTACATCTGTAGACGCCTCGCACTCCTCCATAATGCTATTCATCTTCCTCTGCAGTTGCTCCACAGTCCTGTCCTGCAGCCTCCTCACATCCTCTAGCTCAGTTTTAGTCTTCCACAGCTCCTCtatttgtttcctctcctcc

Function

NR:

description
cingulin-like protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU116426 True 235 lncRNA 0.53 2 19383619 19384007

Neighbor

gene id symbol gene type direction distance location
LOC120564015 rfx7,LOC100694937 coding downstream 25375 19341610 ~ 19358244 (-)
LOC120564050 LOC104931415,LOC103363123,LOC104960120 coding downstream 44504 19323799 ~ 19339115 (-)
rsl24d1 rsl24d1 coding downstream 60948 19318887 ~ 19322671 (-)
LOC120564048 LOC103363116,LOC100694407,LOC102201394 coding downstream 69956 19296993 ~ 19313663 (-)
myo5c myo5c coding downstream 87532 19285472 ~ 19296087 (-)
LOC120564004 LOC103363835,LOC104931412,LOC104960084 coding upstream 13231 19397238 ~ 19415937 (-)
fan1 fan1 coding upstream 33619 19417626 ~ 19423222 (-)
duox2 duoxa2 coding upstream 50242 19434249 ~ 19436656 (-)
zgc:101540 LOC100694233,LOC102305394,LOC102779799,LOC101472508,LOC102208223 coding upstream 153495 19537502 ~ 19547183 (-)
LOC120564200 NA coding upstream 165055 19549062 ~ 19557179 (-)
G86395 NA non-coding downstream 8680 19371007 ~ 19374939 (-)
G86394 NA non-coding downstream 14563 19368759 ~ 19369056 (-)
G86337 pfcyp19b-tstr non-coding downstream 115182 19268211 ~ 19268437 (-)
G86253 NA non-coding downstream 251453 19131851 ~ 19132166 (-)
G86195 tph1 non-coding downstream 371538 19010925 ~ 19012081 (-)
G86430 NA non-coding upstream 141680 19525687 ~ 19527137 (-)
G86432 NA non-coding upstream 146569 19530576 ~ 19531622 (-)
G86519 NA non-coding upstream 164153 19548160 ~ 19548961 (-)
G86529 sqrdl non-coding upstream 217474 19601481 ~ 19603243 (-)
G86517 NA non-coding upstream 225398 19609405 ~ 19618046 (-)
arpp19b arpp19,LOC100693429,LOC102791975,LOC106919339,LOC101065895 other downstream 66141 19315385 ~ 19317478 (-)
LOC120564082 svip other downstream 223132 19156758 ~ 19160487 (-)
G86194 tph1 other downstream 372703 19007196 ~ 19010916 (-)
syt7a LOC102215913,LOC101470916,LOC102782335,LOC103466506,LOC103141308,LOC107388681,LOC100690092 other downstream 687521 18614588 ~ 18696098 (-)
tmem258 NA other downstream 880753 18499319 ~ 18502866 (-)
G86402 LOC103363837 other upstream 3815 19387822 ~ 19388575 (-)
cep152 cep152,LOC104960117 other upstream 173445 19557452 ~ 19573688 (-)
G86638 NA other upstream 868632 20252639 ~ 20259259 (-)
LOC120564033 LOC103358331,LOC102195670 other upstream 1422875 20806882 ~ 20829235 (-)
LOC120563850 NA other upstream 1493661 20877668 ~ 20887626 (-)

Expression


Co-expression Network