G86543 (LOC104950121,LOC106908881,LOC103380454)


Basic Information

Item Value
gene id G86543
gene name LOC104950121,LOC106908881,LOC103380454
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 19694995 ~ 19695815 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU116624
GGGGGCGCAGGGGGAAGGTGTAGGCTCTTTGGGCTGGTCTGGATCAGCTGCGTGCATTGAGCCATGTCACGGTCATGTTGCACTATTCTTTGGATGATCTCGCTCTCTTGAAAGTTTAGTATGCCAGAACTTTGGTGATGCTGGACTTTATTTTGAAGAACAGAGTTCCTCTTCCCGATACGGTCCAGGCGGTCGAGAGCCACGGTCTCAAAGGCC

Function

NR:

description
PREDICTED: LOW QUALITY PROTEIN: potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU116624 True 216 lncRNA 0.53 2 19694995 19695815

Neighbor

gene id symbol gene type direction distance location
trnap-agg_7 NA coding downstream 12078 19682846 ~ 19682917 (-)
parp16 parp16 coding downstream 65105 19623665 ~ 19629890 (-)
atp8b4 atp8b4 coding downstream 96633 19581787 ~ 19598362 (-)
LOC120564200 NA coding downstream 137816 19549062 ~ 19557179 (-)
zgc:101540 LOC100694233,LOC102305394,LOC102779799,LOC101472508,LOC102208223 coding downstream 147812 19537502 ~ 19547183 (-)
LOC120563845 LOC103375932,LOC108230170,LOC106526839 coding upstream 4339 19700154 ~ 19707127 (-)
LOC120563329 NA coding upstream 57589 19753404 ~ 19761910 (-)
nat10 nat10 coding upstream 92896 19788711 ~ 19798138 (-)
caprin1b caprin1 coding upstream 103317 19799132 ~ 19812873 (-)
tspan18b tspan18 coding upstream 190096 19885911 ~ 19954815 (-)
G86540 LOC103375930 non-coding downstream 15906 19674923 ~ 19679089 (-)
G86517 NA non-coding downstream 76949 19609405 ~ 19618046 (-)
G86529 sqrdl non-coding downstream 91752 19601481 ~ 19603243 (-)
G86519 NA non-coding downstream 146034 19548160 ~ 19548961 (-)
G86432 NA non-coding downstream 163373 19530576 ~ 19531622 (-)
G86549 NA non-coding upstream 28158 19723973 ~ 19725193 (-)
G86566 NA non-coding upstream 78492 19774307 ~ 19777043 (-)
G86575 lmo2 non-coding upstream 125725 19821540 ~ 19823373 (-)
G86605 NA non-coding upstream 318523 20014338 ~ 20015812 (-)
G86652 reln non-coding upstream 545618 20241433 ~ 20241850 (-)
cep152 cep152,LOC104960117 other downstream 121307 19557452 ~ 19573688 (-)
G86402 LOC103363837 other downstream 306420 19387822 ~ 19388575 (-)
arpp19b arpp19,LOC100693429,LOC102791975,LOC106919339,LOC101065895 other downstream 377517 19315385 ~ 19317478 (-)
LOC120564082 svip other downstream 534508 19156758 ~ 19160487 (-)
G86194 tph1 other downstream 684079 19007196 ~ 19010916 (-)
G86638 NA other upstream 556824 20252639 ~ 20259259 (-)
LOC120564033 LOC103358331,LOC102195670 other upstream 1111067 20806882 ~ 20829235 (-)
LOC120563850 NA other upstream 1181853 20877668 ~ 20887626 (-)
dnajb9a dnajb9,LOC100706374,LOC102775779,LOC102215328 other upstream 1673716 21369531 ~ 21372509 (-)
G87140 NA other upstream 2017227 21713042 ~ 21713554 (-)

Expression


Co-expression Network