G86566


Basic Information

Item Value
gene id G86566
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 19774307 ~ 19777043 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU116652
GTGGTGGCAACTTTTGAGATATAGACAGTAGATACATTAACCTAATCTGGTTTGTATTGAAAGTATAAGATCACATTGAGCATCAGAAATACATAAACCATGATAATCTGTGTACTCACGGCATTAGACTCAGCTTGCCTCCAGATTTCACACCTTCTCTTTTCATAACATAGTTGGCTGGAATGGTTCCCTCGCGACCTGCAGCATTTTTAGCTTTGTACCAGTTTGGAtcctTTGTTAAAGGGTAAGTCCTGTTCTGATGTGCCTGTGAAGTTGTACCTGGCCACACACTCTGTGCCCTGTGGCCATGGAGTCTACGGGAACACGGATAGATCACCAATTAGTAAACAAATGTCTCATAAATTACTCATCAGACATGTCTTGTTGTGTATCTGAGTTTTGACATGCACGTAATCTGGAGGCCTACTCTGGATCTTACCTGGACCTCTGTCATTGTGAGGTGGTTCAATCCTCTCACAGGCGATGTTTTCTAGCTGCTACCATTAGAgctggtaaacacacacacaaacacacaaaacagtgCATAAGAAGAGATTTTTAGCCTGCTTCGGAGAGATTTACTTAACCACCAAGAAATTCTCAGGAAGACCGTGAATTTGTGGTTTGGCTTTGTAGGTGCGCATGTTATTTCATATTTACCAAGTCAGTTATTATCACAACACACTAGAGTAGTGTCAGCTCAGACAGTGCCAGTAAAAAAATAACTCGCTAATACAGAAAGCAGAACTAACgagtcttctttttttcaaaatctttttttaaaatcacactTTCACAACTGGGGCAGAATGTTTCCATGACGCAGGATAACAGTATGCACATAAAGACAAGGCCTCAGTGTGATGATGGATaataactaatatatatatatatataagaaatatactataaaatatattttggaaCAATATTCTAGCTGACTAGCCACTTCtacttatttattgtttttatctcATGTATTCTAACCCATGGGAGAGACACAGACTTCCTCTGCCATGGGTTAGAATGTATGtctgtaaaatttgtaagtgtCAATGCCAATGTCCATGTCTGAAGCCAAAGGAACATTTTCACACAAGTGGACAATAAAGATGTCTAAAAGCCATATAACTTGTAGTTTCTATTCTATATGTTAACCCGACACATTCTCCAGCTAAGCCCCAATGACTGGCCCTTGTAGGAATCAAGATAGTTCTCTTCAACTCTGGAATGCAAACTTGTGGTGAGATCTGACCAGGCCCGAGGGACTCATCCAGCCCAGCGTTTCTTTACGTCAATAAAGCAGCCACTACGACTTCGAGTCACCCAGGGGCAGTGTTTCCATGATACATGCACAACAAATCAGAGCAGAAAGGATGACCTTTGGATTAAGTCATGCTCTAACCCTTTCAATCCTCTCCCAAAACCCCACTTCCTCTCTTCCTGTATCAGTTCCCATGGAGAAGTGATGGGGCTCAATCGTCAGAGCTCAGGGAAAATCCTGGCTCTGATCAATTCTGTCACTGAGGTCATATCCTCTGACATGTCCGTTACTATGCAGTCAACTTCCTGCCCAGACTTAGAATACTCCAATATTAGTGTGGGGTTCTTGGAAACATTAACAGATATCACTCTCTGAGCTCTTCCTTTTAAAATCATCTTTCATTCACTGAAAACACAATCTGGCATGTCATATGTCACACATTTAATGACTAGCCCCTTCACAGACACCAAATGTGAGACTAAGAATGATCACGTCCCAGAAAGGACTGTCATCACCTAGTATGATGAGGATGAGACGGATGTTGTCCCCCATAGAGTACTGCAGCTGTCTATCTGAACACATTTCCCACGCCCATCAACCCAGCAAGGACACCCCCATTTAGCATCTGCTCATTGAAAACCCATCTTTTCTACGTTACACTTTGACATTTCACACTGTGCAGCAGGTCATAACAGGAATAAAAGACTTAAAATCTGAAGTCATGCTAGCAGTGCTTTAAGGCTGTAATGCACATTGTGAAGGAAACCAAACCAATCTGTCCAGCTGACCCCCATCACAGGTTTAAAATGTGTATCTTAAATCATGAGCAGTTCAGCCAAAGAGAGTTTCTCTTCTCAAATTGTTTCATTAAAATTTTGTTTAGAGGCCTGGGAGGCTAAAAGTATCCAGTatttctgaagaaaaaaattataagagaaaagtaacaaaaaaaagtaaacataaattgtgtagaagaaatattttttgatTCTCTCGTAACACATTAATCATCTCGTGGCCTCTCTGATGACCCCTCTAGGATATCCTGACCCCCAGGTTGGAAACCACTGCGCAAGATTcaaagcagtggtggaaagtaactgtacttaagtacaattctgAGTTATTTGTACCCTAATTTTATGctattttttactccactacatttacttGGTACCTGTTGTCATgtgttactttgcagattaagatttaaatgaaatatataaaatacaatccATTGCTATAAAGTAAATTAAACCAGCCAACAGTATAAAGAATGAGTAAAATGAGCTCTAGCGCAGCCAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU116652 True 2570 lncRNA 0.40 2 19774307 19777043

Neighbor

gene id symbol gene type direction distance location
LOC120563329 NA coding downstream 12397 19753404 ~ 19761910 (-)
LOC120563845 LOC103375932,LOC108230170,LOC106526839 coding downstream 67180 19700154 ~ 19707127 (-)
trnap-agg_7 NA coding downstream 91390 19682846 ~ 19682917 (-)
parp16 parp16 coding downstream 144417 19623665 ~ 19629890 (-)
atp8b4 atp8b4 coding downstream 175945 19581787 ~ 19598362 (-)
nat10 nat10 coding upstream 11668 19788711 ~ 19798138 (-)
caprin1b caprin1 coding upstream 22089 19799132 ~ 19812873 (-)
tspan18b tspan18 coding upstream 108868 19885911 ~ 19954815 (-)
cd82b LOC103355222 coding upstream 210740 19987783 ~ 20012310 (-)
LOC120564329 tp53i11 coding upstream 239126 20016169 ~ 20059123 (-)
G86549 NA non-coding downstream 49114 19723973 ~ 19725193 (-)
G86543 LOC104950121,LOC106908881,LOC103380454 non-coding downstream 78492 19694995 ~ 19695815 (-)
G86540 LOC103375930 non-coding downstream 95218 19674923 ~ 19679089 (-)
G86517 NA non-coding downstream 156261 19609405 ~ 19618046 (-)
G86529 sqrdl non-coding downstream 171064 19601481 ~ 19603243 (-)
G86575 lmo2 non-coding upstream 44497 19821540 ~ 19823373 (-)
G86605 NA non-coding upstream 237295 20014338 ~ 20015812 (-)
G86652 reln non-coding upstream 464390 20241433 ~ 20241850 (-)
G86660 NA non-coding upstream 473847 20250890 ~ 20264206 (-)
G86686 NA non-coding upstream 625701 20402744 ~ 20461823 (-)
cep152 cep152,LOC104960117 other downstream 200619 19557452 ~ 19573688 (-)
G86402 LOC103363837 other downstream 385732 19387822 ~ 19388575 (-)
arpp19b arpp19,LOC100693429,LOC102791975,LOC106919339,LOC101065895 other downstream 456829 19315385 ~ 19317478 (-)
LOC120564082 svip other downstream 613820 19156758 ~ 19160487 (-)
G86194 tph1 other downstream 763391 19007196 ~ 19010916 (-)
G86638 NA other upstream 475596 20252639 ~ 20259259 (-)
LOC120564033 LOC103358331,LOC102195670 other upstream 1029839 20806882 ~ 20829235 (-)
LOC120563850 NA other upstream 1100625 20877668 ~ 20887626 (-)
dnajb9a dnajb9,LOC100706374,LOC102775779,LOC102215328 other upstream 1592488 21369531 ~ 21372509 (-)
G87140 NA other upstream 1935999 21713042 ~ 21713554 (-)

Expression


Co-expression Network