G86761


Basic Information

Item Value
gene id G86761
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 20698815 ~ 20699637 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU116909
AAGGTGACCgattattgttgtgtgtgtgtgtgtgtgtgtgtgtgaataacaACTGACATAGACATTTCAGGAGAAAAGGCTTTTAGCCAGCTGAAATTTGCACTTCTGTAAGTGGATGGCAGATTCTTTGGTGGGTACAAAGAGCTGGCTGTCCATCAGCATTTTGAGTTAGCAAACTTGAATATGCCAAGggaaaccaacaaaatactgaaaaatacaaaatatcaaCTCCGTCTTTCCAACAAGATAAAAACAATTtcacttttaaacatttttcacaTGGATCATCTAGGGTGGAAACCTTGAATCGACACGCTCAAATTTCTAGTTTTTCATCGTCAGAAATAGTCTTAGAGGTTTTcttaaaactaaacaaaataatgGAACAATCTTCACTGCAGTTTATTTCATCCACTGTACATGACCTAGACAACACATTTACTGTACTGCGTATgtggtactgtatatattaccCATGGTACCACGCTACTGGCTGACCTGGCCTACCTTCTGGAACACTGCTGTGCATGTGTCTCCCAAgacaaaaggaagaaaaggCAAAACTGTAAGTGAATAAACTAATTTTAAATCTTATGGTGAAAGCTATTTGCCATTCGTAATGAATTATTTAATGACTTGCAGAATCATGCAGCGATAAACTTTTGAAAAAGGTGGCATTTGCTGTGAAATGTTTTCTTCTTGTTTCTCAGCATTGCTATTTTGCATTATGTATTCTGTTATTTTAAGGTAGAATACATAACCTCTTTGATTAAAACTTGTAATCAACTGGGCACGGCTGATCACCTTTGGTTTCTTTACAGCA

Function

GO: NA

KEGG:

id description
ko03060 Protein export
ko04141 Protein processing in endoplasmic reticulum
ko04612 Antigen processing and presentation

RNA

RNA id representative length rna type GC content exon number start site end site
TU116909 True 823 lncRNA 0.37 1 20698815 20699637

Neighbor

gene id symbol gene type direction distance location
hbp1 hbp1,LOC108230206 coding downstream 12128 20675436 ~ 20686687 (-)
LOC120564551 LOC104940623,LOC103358310,LOC104963698,LOC106523659 coding downstream 88747 20604024 ~ 20610068 (-)
LOC120564552 LOC103358309,LOC104963723 coding downstream 102711 20590302 ~ 20596104 (-)
LOC120563518 plcz1,LOC104942417,LOC106523397,LOC108229959 coding downstream 405697 20275877 ~ 20293118 (-)
LOC120563522 NA coding downstream 441038 20256444 ~ 20257777 (-)
kcnd2 LOC104940628,LOC101467844,LOC102200463,LOC102788385,LOC100700816,LOC103358316 coding upstream 27504 20727141 ~ 20762189 (-)
LOC120564151 flnc,LOC103358317,LOC102787912,LOC102305697,LOC102200922 coding upstream 81070 20780707 ~ 20803875 (-)
LOC120563622 LOC103358318,LOC104940631 coding upstream 137053 20836690 ~ 20848727 (-)
nr2c1 nr2c1 coding upstream 151139 20850776 ~ 20858938 (-)
LOC120563620 NA coding upstream 159783 20859420 ~ 20877134 (-)
G86686 NA non-coding downstream 236992 20402744 ~ 20461823 (-)
G86660 NA non-coding downstream 434609 20250890 ~ 20264206 (-)
G86652 reln non-coding downstream 456965 20241433 ~ 20241850 (-)
G86605 NA non-coding downstream 683003 20014338 ~ 20015812 (-)
G86575 lmo2 non-coding downstream 875442 19821540 ~ 19823373 (-)
G86853 NA non-coding upstream 208752 20908389 ~ 20908590 (-)
G86976 NA non-coding upstream 402993 21102630 ~ 21103379 (-)
LOC120563411 NA non-coding upstream 440870 21140507 ~ 21146513 (-)
G87030 LOC103366871,LOC104946806,LOC106525492,LOC108230167 non-coding upstream 545373 21245010 ~ 21251759 (-)
G87107 nrcam,LOC101067328 non-coding upstream 763068 21462705 ~ 21466246 (-)
G86638 NA other downstream 439556 20252639 ~ 20259259 (-)
cep152 cep152,LOC104960117 other downstream 1125127 19557452 ~ 19573688 (-)
G86402 LOC103363837 other downstream 1310240 19387822 ~ 19388575 (-)
arpp19b arpp19,LOC100693429,LOC102791975,LOC106919339,LOC101065895 other downstream 1381337 19315385 ~ 19317478 (-)
LOC120564082 svip other downstream 1538328 19156758 ~ 19160487 (-)
LOC120564033 LOC103358331,LOC102195670 other upstream 107245 20806882 ~ 20829235 (-)
LOC120563850 NA other upstream 178031 20877668 ~ 20887626 (-)
dnajb9a dnajb9,LOC100706374,LOC102775779,LOC102215328 other upstream 669894 21369531 ~ 21372509 (-)
G87140 NA other upstream 1013405 21713042 ~ 21713554 (-)
LOC120564778 LOC103358851,LOC101480430,LOC100706913,LOC102797593 other upstream 1035369 21735006 ~ 21739344 (-)

Expression


Co-expression Network