dnajb9a (dnajb9,LOC100706374,LOC102775779,LOC102215328)


Basic Information

Item Value
gene id dnajb9a
gene name dnajb9,LOC100706374,LOC102775779,LOC102215328
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 21369531 ~ 21372509 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU117338
TGACTTGTACATGATTGTAGTagtttttcatttattgttgAAATGAGCTGATAGAGtattttgtcagtgttttttaAGCACCTTCTTTAATAGTGTAAAGTTACTGTTTGGAAAAATATGTGTCAGTTCACCACTAGTTCACTACTTCCACTCtgttattttttacagtttttggtttccttttttatagtttttgcCATTGTGcgtctaaaaaaacaaaaaacaaaaggtaAAAACAATAGCAGCCCGTGGAGTTTTTGCTTATGTCAGCAATGTCAACAAAAATCTGTGACCCTCTACATGTTTGCTTGTTTAACTGCTGTTTGTACTACATTGTGTTGAAATATTCATGTACCCTACACTGCCAGTCACATGTTTTGAACACCATATATTTGAGCATTTGTAGTTAAATCCGCATCAATGCAGTTGTAAAGTAATTTTAAATATCTGTATTTAGGctatctttaataaaaaaaaaagtcacagacaTTTCTGAGTTCTGAATCACACTCAATATTTTCTGGATGAAGagtaatacatttaaatttCCAGTTACAATGCTTGAAATGTAGCCAAAAATCctaaaatgtgaataaaaaCTTTTGACTGGCATGGCAGACAAACTTCAAAGAATGTTCTATTTGTAACTTGCAGAGGACGAATTTAACTGTACGTTGACTACAGTATGTACTACTGTATATGTTTCATGACTTCTTATTGTACTAGTCACacggtttattttttttaaatttattttatataacagtgtaaaatattgcttttttttatcaacagtGTAAGAATACTGCAGTGCTACAATGCTGAATAAATGCCGTATGTTTAAGTATATACAAGCATCAATGTTCAGCACATTCTCTGAATCTGGTGATGGCTACTCACCAGTGTTAACAAGCTAGTTGATACAACCCCCCAATATATTGTTTTCCTAACATATCATCTGTTACCTCATACTTTAAAACTGTACAGTTACATGCTTCTTTTACATTGTAGTGTGCAATATTTATGATATAATGCACTATGATAGTGTTGTTTATACTAAATGGCACTTTCAATTGTGTATAAATGcgttttaaga
>XM_039809749.1
agaagaaaagggagGGCAGAAGAGAAGCAGCTCCTGAGTAAAGGGATCGAAGAAAGTGATGCCGCTGCTTTTGACCGCTTGATCACTTTTAACAACTGAGCACTGTCATGTTAAGAGCGGATAAATAGTTTAATAGGCAGAACTGCAAAACACCAGCTAAACAGCACTCGTGTTCCCCAAAAAGGGGCATCACAACCATGGCAACTGCACAGTCTGCTGTAACGTTTGCAGTGTGCATCCTCATGATAACAGAGCTAATACTTGCCAAGAAGGACTATTATGATATACTGGGAGTGCCTAAAGATGCTACTGAGCGTCAGATAAAAAAAGCTTTCCACAAGCTTGCAATGAAACATCACCCAGATAAGAACAAGAGCCCTGACGCTGAAGTGAGATTCAGAGAAATTGCTGAAGCTTATGAAACTTTATCAGATGAAACCAGAAGAAGAGAATATGACCAGTTTGGTTACACCTCTGCGTACTTTAGTGGGGAGACGGAAGGCAGACATAGACAAGGTGCCCACCAACCTTTCAGCTTCAACTTTGATGACATTTTCAAGGACTTTGACATTTACAGCCAGAACAGGCACGCTCGCCACCGAAGACACTTTGATGAACACTCAAGGTACCACAAGGAGTCCCACAGCAGACATAAGAGACATTTTCAAGGAGGTTTTGGAGCAGGTATCTTTGATGACATGTATGACGACATAGAGCGAATGTTTACCTTTGacagacacaccaaacagactgaCAACAGGTTTCGTGGTGCATCGAAACAACACTGTAGAACAGTGACACAGCGCAGAGGAAATATGGTAACCACATACACAGACTGTACTGCATCTTAAGATGCAATGTAAAATTACATCTGACTCAAAATTGCTTTAACGGTATACAATACTGTTGTATTGATAAGGTAATGGAAAGCCACATGGTTCAAATACTATGAAATTTGAGCACTGACCTTGATATCTGATATTCAGGCACAGGATGGCAAACAGTGAACACTCAGTTTTCTTAGGTCTAAATTCAAATAAGCTaataatggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtagtgacgCGCGCGCATTGACTTGTACATGATTGTAGTagtttttcatttattgttgAAATGAGCTGATAGAGtattttgtcagtgttttttaAGCACCTTCTTTAATAGTGTAAAGTTACTGTTTGGAAAAATATGTGTCAGTTCACCACTAGTTCACTACTTCCACTCtgttattttttacagtttttggtttccttttttatagtttttgcCATTGTGcgtctaaaaaaacaaaaaacaaaaggtaAAAACAATAGCAGCCCGTGGAGTTTTTGCTTATGTCAGCAATGTCAACAAAAATCTGTGACCCTCTACATGTTTGCTTGTTTAACTGCTGTTTGTACTACATTGTGTTGAAATATTCATGTACCCTACACTGCCAGTCACATGTTTTGAACACCATATATTTGAGCATTTGTAGTTAAATCCGCATCAATGCAGTTGTAAAGTAATTTTAAATATCTGTATTTAGGctatctttaataaaaaaaaaagtcacagacaTTTCTGAGTTCTGAATCACACTCAATATTTTCTGGATGAAGagtaatacatttaaatttCCAGTTACAATGCTTGAAATGTAGCCAAAAATCctaaaatgtgaataaaaaCTTTTGACTGGCATGGCAGACAAACTTCAAAGAATGTTCTATTTGTAACTTGCAGAGGACGAATTTAACTGTACGTTGACTACAGTATGTACTACTGTATATGTTTCATGACTTCTTATTGTACTAGTCACacggtttattttttttaaatttattttatataacagtgtaaaatattgcttttttttatcaacagtGTAAGAATACTGCAGTGCTACAATGCTGAATAAATGCCGTATGTTTAAGTATATACAAGCATCAATGTTCAGCACATTCTCTGAATCTGGTGATGGCTACTCACCAGTGTTAACAAGCTAGTTGATACAACCCCCCAATATATTGTTTTCCTAACATATCATCTGTTACCTCATACTTTAAAACTGTACAGTTACATGCTTCTTTTACATTGTAGTGTGCAATATTTATGATATAATGCACTATGATAGTGTTGTTTATACTAAATGGCACTTTCAATTGTGTATAAATGcgttttaagaaataaaacctcTTTACTTATTTTTGAGCGAGA

Function

symbol description
dnajb9 Enables misfolded protein binding activity. Involved in ubiquitin-dependent ERAD pathway. Located in endoplasmic reticulum.

NR:

description
PREDICTED: dnaJ homolog subfamily B member 9

GO: NA

KEGG:

id description
K09515 DNAJB9; DnaJ homolog subfamily B member 9

RNA

RNA id representative length rna type GC content exon number start site end site
TU117338 False 1096 lncRNA 0.31 1 21369563 21370658
XM_039809749.1 True 2288 mRNA 0.37 3 21369531 21372509

Neighbor

gene id symbol gene type direction distance location
dnm1l dnm1l coding downstream 555 21355580 ~ 21368976 (-)
LOC120563940 NA coding downstream 71932 21284373 ~ 21297599 (-)
zgc:136858 LOC104946800 coding downstream 84791 21277459 ~ 21284740 (-)
cnot4a cnot4,LOC102778264 coding downstream 92633 21263991 ~ 21276898 (-)
tmpob LOC103366874,LOC102305331 coding downstream 179924 21185466 ~ 21189607 (-)
LOC120564741 LOC104962548,LOC102797891,LOC101479938,LOC102194218,LOC102291278 coding upstream 353577 21726086 ~ 21734094 (-)
prickle1a prickle1,LOC104925408,LOC104962552 coding upstream 393173 21765682 ~ 21793881 (-)
LOC120563465 adamts20 coding upstream 502464 21874973 ~ 21961067 (-)
twf1a twf1,LOC102795415 coding upstream 641402 22013911 ~ 22029073 (-)
nell2a nell2 coding upstream 719024 22091533 ~ 22211840 (-)
G87030 LOC103366871,LOC104946806,LOC106525492,LOC108230167 non-coding downstream 117772 21245010 ~ 21251759 (-)
LOC120563411 NA non-coding downstream 223018 21140507 ~ 21146513 (-)
G86976 NA non-coding downstream 266152 21102630 ~ 21103379 (-)
G86853 NA non-coding downstream 460941 20908389 ~ 20908590 (-)
G86761 NA non-coding downstream 669894 20698815 ~ 20699637 (-)
G87107 nrcam,LOC101067328 non-coding upstream 90196 21462705 ~ 21466246 (-)
G87120 NA non-coding upstream 114023 21486532 ~ 21512528 (-)
G87123 cntn1 non-coding upstream 174149 21546658 ~ 21549859 (-)
G87148 NA non-coding upstream 352414 21724923 ~ 21725658 (-)
G87232 NA non-coding upstream 632990 22005499 ~ 22008395 (-)
LOC120563850 NA other downstream 481905 20877668 ~ 20887626 (-)
LOC120564033 LOC103358331,LOC102195670 other downstream 540296 20806882 ~ 20829235 (-)
G86638 NA other downstream 1110272 20252639 ~ 20259259 (-)
cep152 cep152,LOC104960117 other downstream 1795843 19557452 ~ 19573688 (-)
G86402 LOC103363837 other downstream 1980956 19387822 ~ 19388575 (-)
G87140 NA other upstream 340533 21713042 ~ 21713554 (-)
LOC120564778 LOC103358851,LOC101480430,LOC100706913,LOC102797593 other upstream 362497 21735006 ~ 21739344 (-)
LOC120564428 NA other upstream 974661 22347170 ~ 22366978 (-)
parvg parvg other upstream 1316652 22689161 ~ 22706296 (-)
LOC120564579 LOC103366737 other upstream 2039001 23411510 ~ 23422457 (-)

Expression


Co-expression Network