LOC120564428


Basic Information

Item Value
gene id LOC120564428
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 22347170 ~ 22366978 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU117629
CGCCTCCTTTTCCCCGGTTTCCCGGGCAACCATGTCAGGGTGGAGGAAAAGAGCAAATCATTCTCAGTGCAAGACtgaagagaggggaggggaacACGACCAAAGGAGATCCCTGTGTTACAGCGGGAGACATTTCTTTGACCTTCTTCctcactttctccctcctctcctgaTGTGTTTTGGGTTTCcgtcctttcctcctcctccgtctTCTTAAGCATCTCTGCTCTGCTTGGACGGTGGCTGCATCGATGCAAAATGGGTTGTGGCAATTCCTCAGCCACCAACACCTCAGAAGGGCCAGCAGAAGTGTCCAAGGATGTAAGATCCTTTGGGAGACGATGAGAAAAGAAGGAACTATGGTGGCGTATATGTAGGTCTACCAGCAGACCTGACCACTGTGGCTGCCAGTCAGTCCAAGTCCACATGTAAAGACTAGCAGATACTGAAGGGAACACAACACAGGATCCTGCATATTCATTCAGCTACAGACACTCATATTACAAGCAGAGAGCATGTAAGTGCTCCTATTCTGGCTCACCACACACTGAATAACGGCTTTAACACTGTCATTAAGCGAGGATGTGGACAGCTTGCCGGGGATCTGAGGACGCTGCCTCATGGAGTCATGGGTGGCACAGTGActcagggacgcacagcagagGTCTGCATACGGCATCCATCATCACCCTTcactctgcaaaaaaaaatgtttttttaaatgtgggaGCAGACAAACATCCACCCTGTGACTGGCTGTGGGTGGCAGCAACGGGCATTGTGACAACCATCTTGGCTTCTTGGTGACGGCACTGGAACGTTCTCTTTCTTTCAAGGAGAAAGGGGACCCAACcaaataactaactaactgtctgggacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacattcccaaCAGCCCTCTGCAATAATAATTACTGCTCAGTTATTTCTCTCAGAAGCCATCAATGATTCATTGTGTGGCAGAGGCAGAAAGTTAGAGACACCGAGAGAGTTTCGCAGAAAGCAACAGACACATTCCTGTTAATGCATCACAGAACATCAAAGGGTTATTGAAAATAGAATTGATTTCAATCAGGGACCTGCTGCAACTAAAGAGACGGAAAATGACACTGTTTTAATGATGAGTCTAAATGCTAATAACTAAGTTAAATCAAGAGTGTTTTAATCAACGTCCCAAATGTCCTGAGTGCATCAACCAGGTCGTACCTGGTGTTGTCACTTAACTTGTGCCCCAGACTGATTGTGTAACATCAGCATATGAGTCATGATACTTagaggatctctctctctcgctctcatgCTCTCTCTGCAGCATGTTGTTTTCCCCCTCAGGAGCTCTGATTCTAGTGCTTCTGGGTAATTCACACAGCTCTTTGCAATCTTTCTCGGAAGTCACACTGTTCTTATCCCACAACATGAAATGCGATCTATTATgtaacagcaa
>XM_039809372.1
gtgtgtttgtgtgtgtgtgtgtgtgtgtgtgtataaaagcCTCTGTCTCCATGCTTTCACTTCAGTCTCAGTGCAAGACtgaagagaggggaggggaacACGACCAAAGGAGATCCCTGTGTTACAGCGGGAGACATTTCTTTGACCTTCTTCctcactttctccctcctctcctgaTGTGTTTTGGGTTTCcgtcctttcctcctcctccgtctTCTTAAGCATCTCTGCTCTGCTTGGACGGTGGCTGCATCGATGCAAAATGGGTTGTGGCAATTCCTCAGCCACCAACACCTCAGAAGGGCCAGCAGAAGTGTCCAAGGATGTGACAGAAGATCCTTTGGGAGACGATGAGAAAAGAAGGAACTATGGTGGCGTATATGTAGGTCTACCAGCAGACCTGACCACTGTGGCTGCCAGTCAGTCCAAGTCCACATGTAAAGACTAGCAGATACTGAAGGGAACACAACACAGGATCCTGCATATTCATTCAGCTACAGACACTCATATTACAAGCAGAGAGCATGTAAGTGCTCCTATTCTGGCTCACCACACACTGAATAACGGCTTTAACACTGTCATTAAGCGAGGATGTGGACAGCTTGCCGGGGATCTGAGGACGCTGCCTCATGGAGTCATGGGTGGCACAGTGActcagggacgcacagcagagGTCTGCATACGGCATCCATCATCACCCTTcactctgcaaaaaaaaatgtttttttaaatgtgggaGCAGACAAACATCCACCCTGTGACTGGCTGTGGGTGGCAGCAACGGGCATTGTGACAACCATCTTGGCTTCTTGGTGACGGCACTGGAACGTTCTCTTTCTTTCAAGGAGAAAGGGGACCCAACcaaataactaactaactgtctgggacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacattcccaaCAGCCCTCTGCAATAATAATTACTGCTCAGTTATTTCTCTCAGAAGCCATCAATGATTCATTGTGTGGCAGAGGCAGAAAGTTAGAGACACCGAGAGAGTTTCGCAGAAAGCAACAGACACATTCCTGTTAATGCATCACAGAACATCAAAGGGTTATTGAAAATAGAATTGATTTCAATCAGGGACCTGCTGCAACTAAAGAGACGGAAAATGACACTGTTTTAATGATGAGTCTAAATGCTAATAACTAAGTTAAATCAAGAGTGTTTTAATCAACGTCCCAAATGTCCTGAGTGCATCAACCAGGTCGTACCTGGTGTTGTCACTTAACTTGTGCCCCAGACTGATTGTGTAACATCAGCATATGAGTCATGATACTTagaggatctctctctctcgctctcatgCTCTCTCTGCAGCATGTTGTTTTCCCCCTCAGGAGCTCTGATTCTAGTGCTTCTGGGTAATTCACACAGCTCTTTGCAATCTTTCTCGGAAGTCACACTGTTCTTATCCCACAACATGAAATGCGATCTATTATgtaacagcaaaaacaaaaaaaaaacatctcattaAATTTTGTTCAGTTgcaaaaaattgtgaaaaaaggaaacattttaagagaggcAGAGGTGGTGGTTGTATTTTATCGTCCCTCATTTTTCTTACAGTTTATTGACTTTGTTTTGTAACTGATTCTATTACAATCTATTTTATAAATGATGTATCACACTTTATTGtgaattttgtttttctgtatgtAATCCTTGATGGATAAAGCTGGTGCTTTactgtatttttcttattgtcaacaagtCCCATGAagagactatatatatataaataaaaaatccccaTAAGCTCGGTTCCTCTACCAGAGGCCTGAGAGCCTGAGGGTTCTGTGCAGTATTTGGTGAAGCCACTCCCCCAGTTTGGGGGTTACAGTCCCGAGTGCTCCGATTACCACTGGAACCACTGTTGCCTTCACATTCCACATCTTCTTTAGCTCCGATTTAAGCCCTTGGTATGTTTCCTGCCTCTCATGTTCCTATTTCTTGATGTTGCTGCTACATCTATCACAACTACCTCTGGTATGGACAGTTTGGTGTACTTCCTAGACCCGCTTTCCTCATCCCTCCGATCTTGATCTTAGCTTCTAGCCGCCTTCTCCATGCAGGGTACTAGGTTCATCTTGTAGCCAAGCATCTCTAGGATCACTGGAGATGCTTGGCTGTGTATATCAGTTTGTTGGGTTCAgtgaaaacatcttcattacaTCACATCTTCTAGGGTACTCTTTCTCTTAGCCTTGTTAATCGACCAGGTGGTCTCCAGGTATCCAGCTCGCTTATGATCATCTCTCTCAAGTCAGCTGCCCTTTACTTTCAGCTGCCCTTGTGTTAAGCCTGTCTTTTCTTGGGGCTCTGTACCCAACCTCAGATTCTAGGGGGGATGACATCCCCCCGCTGACCTTGCGTCCTGTCCTTTTTGACACGGGTGACGTCCGAGCCGGTATGACATTCCTGTTTGGGGTTTTGGTTTTATGTGGCACTAAGCACCAAGCCCATTCTTCCCACTGAAGAAAAATTCAAGGTAAaaacatattaaatatatattgttacattttaattattattttaattattattttgcactgtagtttttagcaaatgtaCCTTAAACAGTAGTCAGGAGTGAATAGTGCATATGGGACTAAAAATAATCTACAATGCCCATGTCCATCGTCATGAAGGAAAATGTCACCTAGTACAACGGTGTGACTCACTGTGTTTTTAATCGTTcttaaacaacaatggagggctATGGTACAGAGGAATAAGCTATATGAGGCAAAGGTTATGTTATGGCTGTATATTTGTAGGaaggatcaattcattgttgtaGTCTTTTTCCCATGAAATCTGTTGACAAtcagaaaaatataaaatatcaccAGCACAGAGTCCCcatgaaaaaacacattacagCTGGGCGGGCATTAAGGGCCAAGGTCATTTGTCAGCCAGGCTCTTGACAGCTCTCTCTTCTAATGAATGTACAACATCCTCCACTCCCCAGGGCCCTAGACGAGGGTGGAAATAGGCCAATGTTAAACACTTGAGATTCAAGAGATGTTCTTTCCGCATTACACAAAACGCTTTccatgcctgtgtgtttgtgtagcctCAACTGCCCAGTCGCATAAAAACAGGGACTTCTTTCACCATGCCTGAACACAAGCTTACTGTTTACTGTTCCTGTCTGTTTCTTTAAGAATGACGCCCACTAGTTGCCAAACTGTGTCACCGGTTATCAGCTACATTGATACTAAGGGATTTCATGTACAGTAGTGTCTTTTGCAAGTAATTTGTCAGCTCAAATTGTCGCAGCGTTTACACTGTTCACCTGTGGTAGAGACAGAATGTACTGCACATACAAAGATCTTCTTTATGCATTGTGTAGTTTACAGCATATTATAAAAAGAGCTTCAGTGTGCCTACAGCACCACAGCACATTGATTTAGAACTGCACCTGAGACGTTATATTTTCGATGTCCCTTTCTCTGATGTCTACATTTCCACGCTGCTGCTGCCTCAGTTTCCCCGCGTGAGTCTCTAACAGAGGCCTTtggtttttacagtgtgtcgtgccgcctgtctctccctcttttaTCAGTCCCTCTTTGCCCTTTATGGTTGTTCCTCCTGTATATGATGGATGTCATTGCCTTTGCCCTATTCAATTAATCTAACAGGGAGAAGGGGACAAAATGTAGATGAATAACAGTCTAAAGTCAAGTCCTCTGTATTAAAATGTTGCCTTGGAACATTGTGGGAATAGTCGTAAAAAGCTGTGCATGTTGTTTGAATGTTGTAGAGGTTGAGTATGCTTAGAGAAGTAACATATGTTGTAAAGGAGTTCGACATTTTGGggaatacatttatttgttttcttaccgagagttagattagaagattgataccacatTCATGTCTCAGAGTGGTATCAatattctcatctaactcttgacaagaaagcaaacaaagagTCAATttgtaaaaacagataaaagccATTATAAAACGGAATTAACGACGACGGAATTTGAACGATATTACCTTGAGTTCACTATTAAAAAAGCATGATTTATGAaaaggaaataataataattgagaTTTTATATCAAAACAACCAAATATCAATTTAATTGATATTCCATggattgaataaaaaaagaagataaaaaataaataaaaatgaagacatctgtttttgcaaatgaacCCTTCAAATATTTCTCCAAAAGGTCAAACTACTCCTTTAATGTTTGGAAACATAAGATCCTTCAGGTTTTGTAATTCAATCACAAAGAAATCACAGAaactacttgaggtcaaagcAGCTGTGAACTGTTTTAATTAATGAAATGCCTCTTCACACACTGGAAAGACCTGGAGTGGTCATTAAAAACCCACCAGTGTCTCTTTATGCTGTTGACAGCTGTATGATAATAAGAGGAAATGACTGAAATGATCGGGTTTTTTCATTGTAGGTTATTTTTCCTTGTGTCTTTCATTCACACTGTACTTTTCATCATTCAAATGACCTGCTCCTCATGAATGTCAATGTACTCCTTCTCAAATCACAAATCACCTTATTCATCAATGATGCTGACACgaggagaataaaaaaaacttgactGCCTCTGTGAAACCCATCCATTAACATCTGATTCAGTTATTTATGATTAAAGACTTTTATATTGTCCAAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU117629 False 1567 lncRNA 0.47 7 22350392 22366978
XM_039809372.1 True 4798 mRNA 0.41 6 22347170 22366863

Neighbor

gene id symbol gene type direction distance location
mov10l1 mov10l1 coding downstream 81373 22240065 ~ 22265797 (-)
szl LOC103380347,LOC103353239 coding downstream 110243 22234736 ~ 22236927 (-)
LOC120564446 prl coding downstream 113571 22230931 ~ 22233599 (-)
nell2a nell2 coding downstream 135330 22091533 ~ 22211840 (-)
twf1a twf1,LOC102795415 coding downstream 318097 22013911 ~ 22029073 (-)
tubgcp6 tubgcp6,LOC107089493 coding upstream 33771 22400749 ~ 22428938 (-)
plxnb2b plxnb2 coding upstream 64859 22431837 ~ 22554892 (-)
parvb parvb coding upstream 339908 22706886 ~ 22725459 (-)
hdac10 hdac10 coding upstream 359507 22726485 ~ 22735827 (-)
aplnr2 NA coding upstream 369397 22736375 ~ 22739778 (-)
G87254 NA non-coding downstream 240915 22105880 ~ 22106255 (-)
G87249 NA non-coding downstream 264632 22070958 ~ 22082538 (-)
G87232 NA non-coding downstream 338775 22005499 ~ 22008395 (-)
G87148 NA non-coding downstream 621512 21724923 ~ 21725658 (-)
G87123 cntn1 non-coding downstream 797311 21546658 ~ 21549859 (-)
G87329 appl2 non-coding upstream 21017 22387995 ~ 22390216 (-)
LOC120563633 NA non-coding upstream 210039 22577017 ~ 22682276 (-)
G87400 NA non-coding upstream 394207 22761185 ~ 22837866 (-)
G87464 NA non-coding upstream 782141 23149119 ~ 23149344 (-)
LOC120563856 NA non-coding upstream 831594 23198572 ~ 23224641 (-)
LOC120564778 LOC103358851,LOC101480430,LOC100706913,LOC102797593 other downstream 607826 21735006 ~ 21739344 (-)
G87140 NA other downstream 633616 21713042 ~ 21713554 (-)
dnajb9a dnajb9,LOC100706374,LOC102775779,LOC102215328 other downstream 974661 21369531 ~ 21372509 (-)
LOC120563850 NA other downstream 1459544 20877668 ~ 20887626 (-)
LOC120564033 LOC103358331,LOC102195670 other downstream 1517935 20806882 ~ 20829235 (-)
parvg parvg other upstream 322183 22689161 ~ 22706296 (-)
LOC120564579 LOC103366737 other upstream 1044532 23411510 ~ 23422457 (-)
G87538 NA other upstream 1127352 23494330 ~ 23498659 (-)
G87624 LOC103358853,LOC104921025 other upstream 1372004 23738982 ~ 23741190 (-)
LOC120563922 NA other upstream 1542191 23909169 ~ 23916202 (-)

Expression


Co-expression Network