G87329 (appl2)


Basic Information

Item Value
gene id G87329
gene name appl2
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 22387995 ~ 22390216 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU117635
GTTGGGTGAGCCCTCTGGTCTCTTCTCAAAGCTGGTGATGGGGGTGACTGCCTGGATGGCGGTCTGGTTCAGTCGGATGGCCACGGCCTCTGGGTTGTCAGTCAGGTAGATCTGTCTGGAGATGTTGTTCACAGTGCAAATCcaTTCTTCATATTCCCTTTTGCTCTCAGCTTGTAGAATCATTGACGTTTTGCCTGAGGGGGAGGTTATCTGAAAACAGTAGCGTCTGTCTTCACACTCCACAGCCATGACGGAGCTGTTGTCCAGGTCCAACACCATGCCCCCCGCCACCGCCCCACGCGGCTGGCACATGAGGTTCCCTCCCTGGGTGAAGAAGTACAGTCGGTCCCAGGCTGTGGTCACTAGGCCTGTTTTACTGGAGCACAGAAAAGAAGGGGCAGAACGAGTGGATAAAGGTCAGCACTTTAGGATGAGATTTAAGAAAACCCAATGGTG

Function

symbol description
appl2 Predicted to enable gamma-tubulin binding activity. Predicted to be involved in signaling. Located in endosome. Is expressed in hindbrain; peripheral olfactory organ; and spinal cord. Orthologous to human APPL2 (adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2).

NR:

description
PREDICTED: DCC-interacting protein 13-beta isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU117635 True 456 lncRNA 0.54 4 22387995 22390216

Neighbor

gene id symbol gene type direction distance location
mov10l1 mov10l1 coding downstream 122198 22240065 ~ 22265797 (-)
szl LOC103380347,LOC103353239 coding downstream 151068 22234736 ~ 22236927 (-)
LOC120564446 prl coding downstream 154396 22230931 ~ 22233599 (-)
nell2a nell2 coding downstream 176155 22091533 ~ 22211840 (-)
twf1a twf1,LOC102795415 coding downstream 358922 22013911 ~ 22029073 (-)
tubgcp6 tubgcp6,LOC107089493 coding upstream 10533 22400749 ~ 22428938 (-)
plxnb2b plxnb2 coding upstream 41621 22431837 ~ 22554892 (-)
parvb parvb coding upstream 316670 22706886 ~ 22725459 (-)
hdac10 hdac10 coding upstream 336269 22726485 ~ 22735827 (-)
aplnr2 NA coding upstream 346159 22736375 ~ 22739778 (-)
G87320 nuak1 non-coding downstream 32799 22287944 ~ 22355196 (-)
G87254 NA non-coding downstream 281740 22105880 ~ 22106255 (-)
G87249 NA non-coding downstream 305457 22070958 ~ 22082538 (-)
G87232 NA non-coding downstream 379600 22005499 ~ 22008395 (-)
G87148 NA non-coding downstream 662337 21724923 ~ 21725658 (-)
LOC120563633 NA non-coding upstream 186801 22577017 ~ 22682276 (-)
G87400 NA non-coding upstream 370969 22761185 ~ 22837866 (-)
G87464 NA non-coding upstream 758903 23149119 ~ 23149344 (-)
LOC120563856 NA non-coding upstream 808356 23198572 ~ 23224641 (-)
G87469 NA non-coding upstream 841022 23231238 ~ 23238532 (-)
LOC120564428 NA other downstream 21017 22347170 ~ 22366978 (-)
LOC120564778 LOC103358851,LOC101480430,LOC100706913,LOC102797593 other downstream 648651 21735006 ~ 21739344 (-)
G87140 NA other downstream 674441 21713042 ~ 21713554 (-)
dnajb9a dnajb9,LOC100706374,LOC102775779,LOC102215328 other downstream 1015486 21369531 ~ 21372509 (-)
LOC120563850 NA other downstream 1500369 20877668 ~ 20887626 (-)
parvg parvg other upstream 298945 22689161 ~ 22706296 (-)
LOC120564579 LOC103366737 other upstream 1021294 23411510 ~ 23422457 (-)
G87538 NA other upstream 1104114 23494330 ~ 23498659 (-)
G87624 LOC103358853,LOC104921025 other upstream 1348766 23738982 ~ 23741190 (-)
LOC120563922 NA other upstream 1518953 23909169 ~ 23916202 (-)

Expression


Co-expression Network