G87888


Basic Information

Item Value
gene id G87888
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 25442937 ~ 25444422 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU118393
aaaaaaactggctgtTTATTTATAGATTTAAGACACAAATATTAGACATTAAAACCAGGGGAAACATCAGACTTCTGTTTGTTGTTACACAAGAATAAAGACTGAGCCGAGTTATTTCAAAAGGCTGTTGACACACCGGCATTTCCCTTGGGTGGGTATACGACTCTCAGTGCATCGTAGTGCAGTGCTACAGCACAGTGAAGTCATGTTGTTGTCAAACATGCCCCACATATTACGGGTGACGCCGCTTTCAATTTTGAATTTAAGACAACAGAATCAATCACATTAGAAACAAACCGCTGACACAGACAGACTTGCGGCGGTATATCATGAATGAACGCCACGGCTGAGCGGGTCAAGGTAGAAAGTGCGTACACTCGTCGGGAATGCAATCTGTCATGCGCTGCAGATTGGCCAGGACTAATGAGCCCTTCCATTACAGTGCATAGAAAGCTGATAGTGCTGGAGTGCTATTTTTGCACAGTCAAATTGCAGTTCGATTTTCACCTAACAAAGACTCAGCAACATTCGCCAATCAATAGGTGTCAAAAAGTCCCCCCGCTTCTGATAATAGACAAGCACACAAGGAAGTGAGCGCAAATCTACAAGCATAAAGAATCAGCGGGTAGGGCGGAGGGTGTAGGGGACAGGAGGGGTGAAGGCACCAGGATGATGGAAAGTGCAAGAGACAACATCATAGAACAAAAGCTACAAGACactgaggttgttttttttacaatcaaAATATAACACAATATATTCTCTTGAAGACGTAAGGCATTTGTGGCATCTGGAAAAGATTCCCTTTCTTTGTCTGGGAGAGTCCAGAATGTTTGtcaaaatgacagaaacaaaattatATTGTACATAAATGAAGTGTGAAGCACACCGCGTCAAAGAATTTCCCATTTCTGACATCTGTCGGGCTTAACAGATGCTCCGCTCAGCTGCCTACCCAGGCTCCTCTCTGAGTCAGCCCGGCTCACCACTAAAGCCAAGGATCTGACTGGCTGTGGAAATTGAGCCTGATGGTAATTGATTGCACATAACTTTGTGTGCCTCAATTAAAGAAAGTTAGTAGCTAgtgaggaattaaaaaaaaaaaagtttgagagcagAACAGACGTGGCCATCCATATTTGTCACAGCAGCCCTCTTCAAGGTCAGCTcccggggaggggggaggaaggGGAAGGGGAGGGGAGCAGGGTAAAAGAGAtggctgacagagagagagagagagagagagagagagagagagagagagagagccagccTGACAGCTCAACAGGGCTGACGGCTGGCTGAAGCCGACACTGAAGGACAGGAGGAGGTAGCAGGAGTCTGGTCTGCTGGTTTTAGGGGGCGTGGTCCATGGATGGTCCAGAATTATTGTCGTCAAAGTCCCGTTGGTCCATGGGCTCCGCCCTCGGCTCTGGCAGCCTG

Function

GO:

id name namespace
GO:0004177 aminopeptidase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU118393 True 1446 lncRNA 0.47 2 25442937 25444422

Neighbor

gene id symbol gene type direction distance location
pamr1 LOC103357277 coding downstream 55625 25302836 ~ 25387312 (-)
slc1a2b slc1a2 coding downstream 148980 25262241 ~ 25293957 (-)
LOC120564736 lrrc4c,LOC104932125,LOC100701892 coding downstream 548134 24765416 ~ 24894803 (-)
LOC120563810 NA coding downstream 1054688 24383761 ~ 24388249 (-)
rag2 rag2,LOC102798233 coding downstream 1222594 24161577 ~ 24220343 (-)
ascl1b LOC103357271,LOC100706722,LOC104920455,LOC101171241 coding upstream 171939 25616361 ~ 25617983 (-)
rassf7a rassf7 coding upstream 207330 25651752 ~ 25688678 (-)
lrrc56 LOC106573360 coding upstream 248313 25692735 ~ 25702672 (-)
ldha LOC104920463,LOC100534427 coding upstream 294526 25738948 ~ 25748198 (-)
abtb2b abtb2 coding upstream 531978 25976400 ~ 26027084 (-)
G87883 NA non-coding downstream 78162 25364568 ~ 25364775 (-)
G87876 fjx1 non-coding downstream 88813 25351256 ~ 25354124 (-)
LOC120564148 NA non-coding downstream 214732 25181329 ~ 25228205 (-)
G87865 NA non-coding downstream 225214 25216720 ~ 25217723 (-)
G87815 NA non-coding downstream 274610 25168076 ~ 25168327 (-)
G87961 NA non-coding upstream 204907 25649329 ~ 25650117 (-)
G87964 tsg101 non-coding upstream 291077 25735499 ~ 25736123 (-)
LOC120563936 NA non-coding upstream 433278 25877700 ~ 25880981 (-)
G87977 NA non-coding upstream 509916 25954338 ~ 25956429 (-)
G87986 NA non-coding upstream 530370 25974792 ~ 25975152 (-)
G87803 NA other downstream 377449 25064752 ~ 25065488 (-)
LOC120563922 NA other downstream 1526735 23909169 ~ 23916202 (-)
G87624 LOC103358853,LOC104921025 other downstream 1701747 23738982 ~ 23741190 (-)
G87538 NA other downstream 1944278 23494330 ~ 23498659 (-)
LOC120564579 LOC103366737 other downstream 2020480 23411510 ~ 23422457 (-)
G87897 NA other upstream 151931 25596353 ~ 25596761 (-)
phrf1 NA other upstream 186354 25630776 ~ 25647000 (-)
ptprjb.1 NA other upstream 1209214 26653636 ~ 26692244 (-)
G88249 mthfs other upstream 1568815 27013237 ~ 27014411 (-)
zgc:153031 LOC100703984,LOC102237950,LOC106523206,LOC105917737 other upstream 1779540 27223962 ~ 27229372 (-)

Expression


Co-expression Network