G88030


Basic Information

Item Value
gene id G88030
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 26242641 ~ 26243620 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU118570
tgtgcttagaagaACTGATAAGCATTACACTGACCGTTTCAGTGCTATATCTGTTTTCTGACACTTGATTTCACAGCAATAATGTATTGTTCCATGTGTATAAACATGCATTTATCAAGGCTAAATAAGGTGGAAATATAAGACTTAACAGGAGGGTTTAATGAATGCAACATATTGTCAGCACAGACAGACTTAACAGTAAAAATCCTTATCACAATGTTTATAAAGAGTagctccatctagtggtcaGCGGAGGTAAAGTCCTTTCATTTAAGCACATGTCAGGTGACAAAAACACTTTTGGGAAGACCATGACATACATACTACCTATGATGCCTGTTTATGAATGTTCACATTGTAAGCTAGATACAATACAGACACATGTTGCACTGTTCTATACTGCCAGGGACCAGGGAAAGAAGCAAAGCTGAATTTATTCATATGCACAGCTATATTTTAGAGCCATTGCAGAGACTGGTGTACATTTATTTGAATTGCTCAGAGCAAAAGTGCTAGAGAAATGGAAGTCGAGCCATAACATACTGTACTAGGACCTAATAGTCAAACGTGTTTATATTGTTTCATGCAGTTACATATATGACATTATATACCATGTCTGAACATCAAGCTTTGTTGTTTGCGCTGCCCTTTGTCATTACCAAGAGATTTTGCAATTCTTTTAAGTTTTTCCAGTTGATTTCTAACGGAGTTCCAGGTTACTGATAATAAATCATTTTCATCTTAGGAAGTGATGTTAACAGATGTTTGTACGGTTTGTTCGTGAACTTTTTGTTCTCGCTGCCGCGATCGATTCTTAGCCAAGAATTTGGGATCTCGGCCTGCACACAAGTATGTTTGGCTTGCTGGAGTATCTTTAGTCATGCGGCCTGACCACCAATTGTACATCACTGCTCCTTTTATGAATCTGGTTGACGGCAGTGATGCCCGGGGCTCAGGCCAAAGCTTATGTACATTTATGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU118570 True 980 lncRNA 0.39 1 26242641 26243620

Neighbor

gene id symbol gene type direction distance location
tmem86a tmem86a coding downstream 15844 26209845 ~ 26226797 (-)
b4galnt4a b4galnt4 coding downstream 52635 26032395 ~ 26190006 (-)
abtb2b abtb2 coding downstream 215557 25976400 ~ 26027084 (-)
ldha LOC104920463,LOC100534427 coding downstream 494443 25738948 ~ 25748198 (-)
lrrc56 LOC106573360 coding downstream 539969 25692735 ~ 25702672 (-)
si:dkeyp-19e1.3 LOC103366057,LOC107688560,LOC107553860 coding upstream 326 26243946 ~ 26267018 (-)
si:ch211-236l14.4 LOC103366054 coding upstream 59746 26303366 ~ 26327374 (-)
igf2b igf2 coding upstream 251562 26495182 ~ 26503238 (-)
th th coding upstream 261480 26505100 ~ 26512528 (-)
osbpl5 osbpl5,LOC104951242 coding upstream 343530 26587150 ~ 26652111 (-)
G88035 NA non-coding downstream 8134 26234037 ~ 26234507 (-)
G88032 NA non-coding downstream 11321 26229603 ~ 26231320 (-)
G88016 NA non-coding downstream 143830 26098557 ~ 26098811 (-)
G87986 NA non-coding downstream 267489 25974792 ~ 25975152 (-)
G87977 NA non-coding downstream 286212 25954338 ~ 25956429 (-)
G88042 NA non-coding upstream 36838 26280458 ~ 26285437 (-)
G88054 NA non-coding upstream 55954 26299574 ~ 26302020 (-)
G88067 NA non-coding upstream 150704 26394324 ~ 26394952 (-)
G88096 phlda2,LOC100705395 non-coding upstream 235122 26478742 ~ 26564586 (-)
G88101 nap1l4,LOC103366050 non-coding upstream 294288 26537908 ~ 26542012 (-)
phrf1 NA other downstream 595641 25630776 ~ 25647000 (-)
G87897 NA other downstream 645880 25596353 ~ 25596761 (-)
G87803 NA other downstream 1177153 25064752 ~ 25065488 (-)
LOC120563922 NA other downstream 2326439 23909169 ~ 23916202 (-)
G87624 LOC103358853,LOC104921025 other downstream 2501451 23738982 ~ 23741190 (-)
ptprjb.1 NA other upstream 410016 26653636 ~ 26692244 (-)
G88249 mthfs other upstream 769617 27013237 ~ 27014411 (-)
zgc:153031 LOC100703984,LOC102237950,LOC106523206,LOC105917737 other upstream 980342 27223962 ~ 27229372 (-)
G88379 panx2 other upstream 1111352 27354972 ~ 27355776 (-)
LOC120564276 LOC103371718,LOC104949276,LOC102797857,LOC100696892 other upstream 1380370 27623990 ~ 27650062 (-)

Expression


Co-expression Network