G88042


Basic Information

Item Value
gene id G88042
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 26280458 ~ 26285437 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU118587
CTGTCGTAGCACTTTCCGTGGAGGAGGGACTTGGCATAGCTGTCCAGAGACTTGACTGGGTTGTCTGCATCGTAGCACTGCTCGGTGTCATCAAGGGTAACACAGAAGGCTGCCTTCTCAATGGCGTCCAGCGATTGCTTGTTCTTACCACGGGCGAAGTAGGTTTCACGAGCCTTGGCCCATGGTGTTCTGCAGAATGTCACAtaagactttttttcccccccccattAGGTCTCAGGCAATGCCTTACAGGAGTCAAGCTCCTGTAAGTTTCTCCTCAGTGAGAAAAGTGTGGGAGGTACGTGTGGGGGGTACGTACAGTGCATTTTTGTGGTCATTGCAACAGCCTTTCCTAGCCTTATAGTATACTGTAGTATAGAATTATAGTATAGATACATGTTTGAGGACATTTAGAAAGTCAcatagtttgtttatttttcaacagcaAAATGTCCTGCTCAGTATATATCTTGGGTACAATTCTTTAGTATCACATTTAAGTGATCCTTATTATGGTATCTTAATTTTAAAAGCTGAATATCAGACAATATATTGCTctcccattttttttaaatctagctATCTGCCTCAAAATTGCAGTATTGGTTGTTAATGGTCAGTTCTAACTCCTTAGAGCTGACTATTAACCTTTATATATGACCGTATGTTTTCAGTGTGCTACCACTGTATAACTGCAGAACGCTGAATCAACCTTGGAACATATCATTGCCATAAATGTCCATCTACGTACGGTGTTTCTTTACTTCCTGTCGTGCTACAATACATAGTGGAAACTGTGTGGCCTAATCAATACTGGCTGCAGCTGGCTCTGTAATGCCACCCACCTTTCCCCTGCGGTAAGTGCGGCCAGCTTCTCCTCTCCTGGCAATGGCTCAGACTGGTCGTCCAAGATCCTCTGCATCTGCTGCTCTATCTCCCGTGGCAACAGTAGCCGTCCGTCATAAAACATCCACACTTTGAAGAAACGGCCCTTATGGTACACAGCTATGTGTTTGCTGTCGTTCATGTGCTGAAGCGTGTCTGTCTACACCTGGGACACGACTGCTGTTGAACATATGCTCGCATTGGGCTGAGCACATGGGAATAGTGTTTTGGAGCATGAGCTGAAAAGCAAAAGGGGAGagtcaaacacacagagatgacAAACTAATTCACTAAAATCCCAGAGAGCGGCAGCAGATGCACACCTACACGGACAAGAGCATGGATGAAGTGGAAAAGGGAGCGATGAGGATCGGTTTGAAGGAGGAGAAGGGACCCGAGAAGGCTGCCAGGGAAAGAGCATGGTCCAAAAACTGCCGTCTCAATGCCACCAGCAAAGCCCTGATATTTGCAGCAGAATTTGTAATAAAATGTAGATGTTTTACATATGTACACTTgacaaatttaaatattttttttttctcccaaatGCCTAGAATTAAACTGACAAAAGCCAATGAGAAGTAAGATTGTTTCAGGGCTGTGCTGTTGAGAATGAGTCCAGTAGTTAGGGTTTCCAGTGGCTATTGCCGTGGCAATAGCTAGGGTAACAGGGTAGGGGTTCAGAGGGCATGGCGGAGATGTGCCCTCCTCTTACCTGTCTCCAAACCAGGGACGCGGCTGGTGTTAAACATCTGCTCCCATTGAGCCGAACACAGAGGAATCTTGTTTGCCAGCAAGTATATCTAACGCACATCCGACACAGCGAAGGgacaaaacagtgaaacagagACAATCGAATGTGAGTGTGTTATAGAGCGAGCTAATGCATCGGTGTGTGTACAAATGCATACAATCGGTCTTTGCATTAAAAGGacagtgtttatttttgcaaCATGTTGTAGAATGTGTGTTAGGATGgtgcaaatggaaaaacaaatttGCACGTAAACATCATGCAGGATGGTAAAGGAAAAAGGACTGAGAGACGAGCAGGAAAAGATGTCACACATGTCGTCAAATCACTAGCATTCATTAAGCCTTATTCACTAGGAAGCCTTAAGAAATTGCTTGTGATTTCGCTCTACATCAAAACAAGCAAAAAGCACAGTAAACGGCTTATTCCAAAGTCAAAGTGAGACACAGTGAGCTGTGGATAATATCAAGTATTTACATAATTATTGGTGAGATAACAAACTTACTTTAAGAGTACAAAACAAAAGGTTGTGAAAGATAAGCAGCTCTTATTGTAAACttaaaaagacaaacacactGAGACAAGAGCGAGTGATCAATAAATCATAAATGAGAAAGTTAAACATTAACATATGATTGATATGGTCAATAATGTAGTTTTATCAGTGTGAAGGGAACAGAGGAGCGCTATACTCACTGGTTTGATCTGGGCTCTGTCCAGTTTTCTCCTGTAGAGCATGATAGCATGGATTGCATTGCCTGCCCTGGCAGCCTGGATGGAGGTGGGGAACACATACAGGAAATCCTGGGGGAAAAAGGGAGATTAATAGTTatacattaataataattttatccAAGGTGTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU118587 True 2501 lncRNA 0.43 2 26280458 26285437

Neighbor

gene id symbol gene type direction distance location
si:dkeyp-19e1.3 LOC103366057,LOC107688560,LOC107553860 coding downstream 13440 26243946 ~ 26267018 (-)
tmem86a tmem86a coding downstream 53661 26209845 ~ 26226797 (-)
b4galnt4a b4galnt4 coding downstream 90452 26032395 ~ 26190006 (-)
abtb2b abtb2 coding downstream 253374 25976400 ~ 26027084 (-)
ldha LOC104920463,LOC100534427 coding downstream 532260 25738948 ~ 25748198 (-)
si:ch211-236l14.4 LOC103366054 coding upstream 17929 26303366 ~ 26327374 (-)
igf2b igf2 coding upstream 209745 26495182 ~ 26503238 (-)
th th coding upstream 219663 26505100 ~ 26512528 (-)
osbpl5 osbpl5,LOC104951242 coding upstream 301713 26587150 ~ 26652111 (-)
kcnj11 kcnj11 coding upstream 579622 26865059 ~ 26868757 (-)
G88030 NA non-coding downstream 36838 26242641 ~ 26243620 (-)
G88035 NA non-coding downstream 45951 26234037 ~ 26234507 (-)
G88032 NA non-coding downstream 49138 26229603 ~ 26231320 (-)
G88016 NA non-coding downstream 181647 26098557 ~ 26098811 (-)
G87986 NA non-coding downstream 305306 25974792 ~ 25975152 (-)
G88054 NA non-coding upstream 14137 26299574 ~ 26302020 (-)
G88067 NA non-coding upstream 108887 26394324 ~ 26394952 (-)
G88096 phlda2,LOC100705395 non-coding upstream 193305 26478742 ~ 26564586 (-)
G88101 nap1l4,LOC103366050 non-coding upstream 252471 26537908 ~ 26542012 (-)
G88106 NA non-coding upstream 262337 26547774 ~ 26549686 (-)
phrf1 NA other downstream 633458 25630776 ~ 25647000 (-)
G87897 NA other downstream 683697 25596353 ~ 25596761 (-)
G87803 NA other downstream 1214970 25064752 ~ 25065488 (-)
LOC120563922 NA other downstream 2364256 23909169 ~ 23916202 (-)
G87624 LOC103358853,LOC104921025 other downstream 2539268 23738982 ~ 23741190 (-)
ptprjb.1 NA other upstream 368199 26653636 ~ 26692244 (-)
G88249 mthfs other upstream 727800 27013237 ~ 27014411 (-)
zgc:153031 LOC100703984,LOC102237950,LOC106523206,LOC105917737 other upstream 938525 27223962 ~ 27229372 (-)
G88379 panx2 other upstream 1069535 27354972 ~ 27355776 (-)
LOC120564276 LOC103371718,LOC104949276,LOC102797857,LOC100696892 other upstream 1338553 27623990 ~ 27650062 (-)

Expression


Co-expression Network