G88101 (nap1l4,LOC103366050)


Basic Information

Item Value
gene id G88101
gene name nap1l4,LOC103366050
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 26537908 ~ 26542012 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU118660
CATTGGCTGTCCTGGCTCAGAAAACTTGACTTGAATATCTCTCAGGTGCTTTAGGATGGGCTCATCATGTTCCTGTAGCATGTCACTGAGCATGTCCACACTCTTGAATATGGTGAGCCAGAACTCGGGAATGCCTTTTGGGTCTTCCTGTGGCGTggcttcctctttctttgcatCCTCAATGGCAGCTTTTTCCTTTACCTCCTCAGCtagctcctcctcttcctctctgtcactGTGCCACTCGCACTCTTCATCTGTGGGTTCCGCTGTTCCTGTGACAATATCTCGTCTCTTGTCAAACAGTGGCTGATAGAGAGCGGCATACTTCCTCTCTAGCTCATGGACCTCCTCGTAGAATTTAGCCTCTATGTTGGCACACTGCACCTGTAGCCTTTTCAAGGCATGCACTCGCCTCTTGACTACTTTAGGAAGCATGCTTTCCAAGAAGTGGAAGCTGACAGGTCTGTCCATCTGCCCACCTGGATTCTGCATCCCTTGTTCCCCTTTACCTTTATTGGCGTCCATTACCGAGTGACAGCTCCTTCCCCctctaataaataaaaacagaaaaatgataTTAGACATTATACTCGTCATCATGAATCGCAGCCTGTATGGGTTCCTACTGACAAGGCCAGCAACAGAGTGAATGGGAAAAACAGTGACAATTCTATTTCACCAGCGAGCGCGTTTGCGCCTGTCATTTAATCATTCTTATCATTATTACATTGCCACACA

Function

symbol description
nap1l4 Enables nucleosome binding activity. Involved in nucleosome assembly. Located in cytoplasm and nucleus.

NR:

description
PREDICTED: nucleosome assembly protein 1-like 4 isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU118660 True 741 lncRNA 0.47 6 26537908 26542012

Neighbor

gene id symbol gene type direction distance location
th th coding downstream 25380 26505100 ~ 26512528 (-)
igf2b igf2 coding downstream 34670 26495182 ~ 26503238 (-)
si:ch211-236l14.4 LOC103366054 coding downstream 210534 26303366 ~ 26327374 (-)
si:dkeyp-19e1.3 LOC103366057,LOC107688560,LOC107553860 coding downstream 270890 26243946 ~ 26267018 (-)
tmem86a tmem86a coding downstream 311111 26209845 ~ 26226797 (-)
osbpl5 osbpl5,LOC104951242 coding upstream 45138 26587150 ~ 26652111 (-)
kcnj11 kcnj11 coding upstream 323047 26865059 ~ 26868757 (-)
abcc8 abcc8 coding upstream 326874 26868886 ~ 26938375 (-)
ush1c ush1c,LOC106561052 coding upstream 398292 26940304 ~ 26970866 (-)
LOC120563586 LOC103361099,LOC106096430,LOC104935510,LOC102796586 coding upstream 444178 26986190 ~ 26990413 (-)
G88067 NA non-coding downstream 142956 26394324 ~ 26394952 (-)
G88054 NA non-coding downstream 235888 26299574 ~ 26302020 (-)
G88042 NA non-coding downstream 252471 26280458 ~ 26285437 (-)
G88030 NA non-coding downstream 294288 26242641 ~ 26243620 (-)
G88035 NA non-coding downstream 303401 26234037 ~ 26234507 (-)
G88106 NA non-coding upstream 5762 26547774 ~ 26549686 (-)
G88163 NA non-coding upstream 228398 26770410 ~ 26771392 (-)
G88170 NA non-coding upstream 251501 26793513 ~ 26793768 (-)
G88209 mob2 non-coding upstream 320766 26862778 ~ 26863804 (-)
LOC120563588 slc15a5 non-coding upstream 458929 27000941 ~ 27001458 (-)
phrf1 NA other downstream 890908 25630776 ~ 25647000 (-)
G87897 NA other downstream 941147 25596353 ~ 25596761 (-)
G87803 NA other downstream 1472420 25064752 ~ 25065488 (-)
LOC120563922 NA other downstream 2621706 23909169 ~ 23916202 (-)
G87624 LOC103358853,LOC104921025 other downstream 2796718 23738982 ~ 23741190 (-)
ptprjb.1 NA other upstream 111624 26653636 ~ 26692244 (-)
G88249 mthfs other upstream 471225 27013237 ~ 27014411 (-)
zgc:153031 LOC100703984,LOC102237950,LOC106523206,LOC105917737 other upstream 681950 27223962 ~ 27229372 (-)
G88379 panx2 other upstream 812960 27354972 ~ 27355776 (-)
LOC120564276 LOC103371718,LOC104949276,LOC102797857,LOC100696892 other upstream 1081978 27623990 ~ 27650062 (-)

Expression


Co-expression Network