zgc:153031 (LOC100703984,LOC102237950,LOC106523206,LOC105917737)


Basic Information

Item Value
gene id zgc:153031
gene name LOC100703984,LOC102237950,LOC106523206,LOC105917737
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 27223962 ~ 27229372 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU118971
GATAGTTGAGTTCAAGCCGCAATACGTTGTTcccgcacacagacagacgcgaAGTGTTGCAGATTTTGATCCTGCGCCTGTTTTACTTTGACGCAATAGTTTGATGGAAATGAGTCCGGACGGTCGGGACAAAGTGCAGAAGAAGCCTGTTCGCCTCATAGCAGCGGTCTGCAATGACATGGGGATCGGCAAAGACGGGAAACTGCCCTGGAATTTACCGTCTGAATTCCAGTACTTTCTGAACACTGTCAAAAGGGTGTCGAGACCAGgaaaGATGaacatgatggtctggggcaaACTGTGCTGGTACTCCCTCCCAAAATCTATGTTCCCAATGGCCAATATTCTGCATGTGGTGCTGAGCACGACACTGCAGTGAgtgctctctctcacacaaacacctgCATCAACAAGGGGAGCACGGTTCCAGATCACGCCCACTTCCTGTGTCAAGATTTTGAGAGTGCGGTCCGCCTGGCTGCACAGCCCCCCCTCGCTGACCTAATTGAGACCATCTGGATTGTTGGTGGGACGCAGGTCTACAAGGATGCGCTGAAGCACCCGTGGTGTGACTTGGTTTACCTGACAGACGTCATGGCAGACTTCGACTGTGACGTGTTCTTCCCTGAGTTTGACAGAGAACTCTTCAAAGAACAAGAAGGTTTTCCTGATGTACCGAGTGGAATTCAAGAGGAGAACGGCATTAAGTACAAGTTCCAAGTGTTCAAGAAAGAGATTGGTGATGCTGTGTAGACAGCTAAAAGAGAAAATCAATAGATTGCCAGAAAACACTCAAAATAACTCATTCCTCAAgttcaagttactttatttataCCCGAAGGTAGATTTTGTTTTCAGTAGagtcacacatcatcacattatCACACATCATCAAAAAAGTTCTTATCGGTCCAGAATAAGAtaatacataggcctacataaagaTCGTATGTAAGATACGAGTAAAAAGATTTAATAcgagtaaaaaaaagtaaaagatttAGTTTGCAGTAGACTcctcatacacacatataaaagcAAATGAGTAAAAGagtacatacataaaaaaaaataaaaaaaattccttACAACTTTTCAAGATGTATTGCCAAGTCAACTCCTGGatagactgtagagacatgctgCCAAACCCACAGTGCGTCACTATATTTCTATAAATTCACGGAAATCCACAGTCTTCTTAACACTCTTTGTAATATAGTTGAGTGTAAATATGACTTTTATACTCTTTGTAATCAATGAAAAACTTGAAACGCAGACACTTTAACAGCCGTCCAGTTTGTTTACAAAAGTCTTTGCACGTATCTTCCATCGCTGCTGCTTGGTCGGACATTACGATCTGTTCCGATATAAAAACTGCCACCCTCTGCTCACCTTGTCAGCGTTCCCATCTCGCCCTCCTCCTCAGTAACATTGCAGCTGCACAGAGAATATGCTTGTCGGCGAGTCAGTCAGCTGCTTACGTTGGCGACAGCCTGTGGTCACAGCAGATCTGGTCCTTTCTAAGCAAACATGACAGATGCCAGTTTAGAAAGCAACAAATGAATTGTCCTACTATGACTGTCTTGTCATTGAGAAAGATACGGGGAAATTTTAAAGCTTGTAATTTGTTGTGATTACAACTGAAAATACATGTATTTTGAAGGTTTTTactgtgca
>XM_039807472.1
gtaATGACAGAGTGGCAAGATCGCAGATGTGGCAGACCCGGAAAACGctgaaccaatcagagcagcagactgggcttttttgggagggggtcTTAAGAAGCAGGCGATAAAACaaagcgtttcagacagagggtgaatacaggtatattcaggcagaaaatataagaaaaagaatatgttttttgaacattaaaacgtgagcatgttctagtagaaacccaaaatgcTAGTTTGAACCTGacaattagcataatatggacCTTTAATAATTTAGACTTTGTCAAAAACTTATCGGATTTTATTATATGGGTTTCTCCCTCCTGCGACCTTTGCATTTTCACATTAAGGATGCGCTGACTGAAACTCGACGTGTCCAATAGCAGCTGCCGATCGGTGGGCGGTGATAGTTGAGTTCAAGCCGCAATACGTTGTTcccgcacacagacagacgcgaAGTGTTGCAGATTTTGATCCTGCGCCTGTTTTACTTTGACGCAATAGTTTGATGGAAATGAGTCCGGACGGTCGGGACAAAGTGCAGAAGAAGCCTGTTCGCCTCATAGCAGCGGTCTGCAATGACATGGGGATCGGCAAAGACGGGAAACTGCCCTGGAATTTACCGTCTGAATTCCAGTACTTTCTGAACACTGTCAAAAGGGTGTCGAGACCAGgaaaGATGaacatgatggtctggggcaaACTGTGCTGGTACTCCCTCCCAAAATCTATGTTCCCAATGGCCAATATTCTGCATGTGGTGCTGAGCACGACACTGCACACGGTTCCAGATCACGCCCACTTCCTGTGTCAAGATTTTGAGAGTGCGGTCCGCCTGGCTGCACAGCCCCCCCTCGCTGACCTAATTGAGACCATCTGGATTGTTGGTGGGACGCAGGTCTACAAGGATGCGCTGAAGCACCCGTGGTGTGACTTGGTTTACCTGACAGACGTCATGGCAGACTTCGACTGTGACGTGTTCTTCCCTGAGTTTGACAGAGAACTCTTCAAAGAACAAGAAGGTTTTCCTGATGTACCGAGTGGAATTCAAGAGGAGAACGGCATTAAGTACAAGTTCCAAGTGTTCAAGAAAGAGATTGGTGATGCTGTGTAGACAGCTAAAAGAGAAAATCAATAGATTGCCAGAAAACACTCAAAATAACTCATTCCTCAAgttcaagttactttatttataCCCGAAGGTAGATTTTGTTTTCAGTAGagtcacacatcatcacattatCACACATCATCAAAAAAGTTCTTATCGGTCCAGAATAAGAtaatacataggcctacataaagaTCGTATGTAAGATACGAGTAAAAAGATTTAATAcgagtaaaaaaaagtaaaagatttAGTTTGCAGTAGACTcctcatacacacatataaaagcAAATGAGTAAAAGagtacatacataaaaaaaaataaaaaaaattccttACAACTTTTCAAGATGTATTGCCAAGTCAACTCCTGGatagactgtagagacatgctgCCAAACCCACAGTGCGTCACTATATTTCTATAAATTCACGGAAATCCACAGTCTTCTTAACACTCTTTGTAATATAGTTGAGTGTAAATATGACTTTTATACTCTTTGTAATCAATGAAAAACTTGAAACGCAGACACTTTAACAGCCGTCCAGTTTGTTTACAAAAGTCTTTGCACGTATCTTCCATCGCTGCTGCTTGGTCGGACATTACGATCTGTTCCGATATAAAAACTGCCACCCTCTGCTCACCTTGTCAGCGTTCCCATCTCGCCCTCCTCCTCAGTAACATTGCAGCTGCACAGAGAATATGCTTGTCGGCGAGTCAGTCAGCTGCTTACGTTGGCGACAGCCTGTGGTCACAGCAGATCTGGTCCTTTCTAAGCAAACATGACAGATGCCAGTTTAGAAAGCAACAAATGAATTGTCCTACTATGACTGTCTTGTCATTGAGAAAGATACGGGGAAATTTTAAAGCTTGTAATTTGTTGTGATTACAACTGAAAATACATGTATTTTGAAGGTTTTTactgtgcagttttttttttgtgaatctACGAGGtttttcatgaaaataaatcaatCGTAATTGTTTAATGGAGAAACAACTGACaatttttgaatt
>XM_039807473.1
ggctgtaATGACAGAGTGGCAAGATCGCAGATGTGGCAGACCCGGAAAACGctgaaccaatcagagcagcagactgggcttttttgggagggggtcTTAAGAAGCAGGCGATAAAACaaagcgtttcagacagagggtgaatacaggtatattcaggcagaaaatataagaaaaagaatatgttttttgaacattaaaacgtgagcatgttctagtagaaacccaaaatgcTAGTTTGAACCTGacaattagcataatatggacCTTTAATAATTTAGACTTTGTCAAAAACTTATCGGATTTTATTATATGGGTTTCTCCCTCCTGCGACCTTTGCATTTTCACATTAAGGATGCGCTGACTGAAACTCGACGTGTCCAATAGCAGCTGCCGATCGGTGGGCGGTGATAGTTGAGTTCAAGCCGCAATACGTTGTTcccgcacacagacagacgcgaAGTGTTGCAGATTTTGATCCTGCGCCTGTTTTACTTTGACGCAATAGTTTGATGGAAATGAGTCCGGACGGTCGGGACAAAGTGCAGAAGAAGCCTGTTCGCCTCATAGCAGCGGTCTGCAATGACATGGGGATCGGCAAAGACGGGAAACTGCCCTGGAATTTACCGTCTGAATTCCAGTACTTTCTGAACACTGTCAAAAGGGTGTCGAGACCAGgaaaGATGaacatgatggtctggggcaaACTGTGCTGGTACTCCCTCCCAAAATCTATGTTCCCAATGGCCAATATTCTGCATGTGGTGCTGAGCACGACACTGCACACGGTTCCAGATCACGCCCACTTCCTGTGTCAAGATTTTGAGAGTGCGGTCCGCCTGGCTGCACAGCCCCCCCTCGCTGACCTAATTGAGACCATCTGGATTGTTGGTGGGACGCAGGTCTACAAGGATGCGCTGAAGCACCCGTGGTGTGACTTGGTTTACCTGACAGACGTCATGGCAGACTTCGACTGTGACGTGTTCTTCCCTGAGTTTGACAGAGAACTCTTCAAAGAACAAGAAGGAGGCAATACGTTATGGATGGTATTGGAAAAAGCCTGAGTATTTTTACCTGCTCTACGTCATTTTCCTGATGTACCGAGTGGAATTCAAGAGGAGAACGGCATTAAGTACAAGTTCCAAGTGTTCAAGAAAGAGATTGGTGATGCTGTGTAGACAGCTAAAAGAGAAAATCAATAGATTGCCAGAAAACACTCAAAATAACTCATTCCTCAAgttcaagttactttatttataCCCGAAGGTAGATTTTGTTTTCAGTAGagtcacacatcatcacattatCACACATCATCAAAAAAGTTCTTATCGGTCCAGAATAAGAtaatacataggcctacataaagaTCGTATGTAAGATACGAGTAAAAAGATTTAATAcgagtaaaaaaaagtaaaagatttAGTTTGCAGTAGACTcctcatacacacatataaaagcAAATGAGTAAAAGagtacatacataaaaaaaaataaaaaaaattccttACAACTTTTCAAGATGTATTGCCAAGTCAACTCCTGGatagactgtagagacatgctgCCAAACCCACAGTGCGTCACTATATTTCTATAAATTCACGGAAATCCACAGTCTTCTTAACACTCTTTGTAATATAGTTGAGTGTAAATATGACTTTTATACTCTTTGTAATCAATGAAAAACTTGAAACGCAGACACTTTAACAGCCGTCCAGTTTGTTTACAAAAGTCTTTGCACGTATCTTCCATCGCTGCTGCTTGGTCGGACATTACGATCTGTTCCGATATAAAAACTGCCACCCTCTGCTCACCTTGTCAGCGTTCCCATCTCGCCCTCCTCCTCAGTAACATTGCAGCTGCACAGAGAATATGCTTGTCGGCGAGTCAGTCAGCTGCTTACGTTGGCGACAGCCTGTGGTCACAGCAGATCTGGTCCTTTCTAAGCAAACATGACAGATGCCAGTTTAGAAAGCAACAAATGAATTGTCCTACTATGACTGTCTTGTCATTGAGAAAGATACGGGGAAATTTTAAAGCTTGTAATTTGTTGTGATTACAACTGAAAATACATGTATTTTGAAGGTTTTTactgtgcagttttttttttgtgaatctACGAGGtttttcatgaaaataaatcaatCGTAATTGTTTAATGGAGAAACAACTGACaatttttgaattta

Function

NR:

description
dihydrofolate reductase-like isoform X1

GO: NA

KEGG:

id description
K00287 DHFR, folA; dihydrofolate reductase

RNA

RNA id representative length rna type GC content exon number start site end site
TU118971 False 1680 TUCP 0.43 6 27224052 27228966
XM_039807472.1 False 2126 mRNA 0.42 6 27223964 27229368
XM_039807473.1 True 2192 mRNA 0.42 7 27223962 27229372

Neighbor

gene id symbol gene type direction distance location
si:ch73-62b13.1 LOC104935271,LOC103361117,LOC104951776 coding downstream 21037 27190915 ~ 27202925 (-)
etfbkmt etfbkmt coding downstream 80651 27135856 ~ 27143311 (-)
washc4 kiaa1033 coding downstream 146129 27061216 ~ 27077833 (-)
lrrc10 lrrc10 coding downstream 173135 27049172 ~ 27050827 (-)
fnbp4 fnbp4 coding downstream 180089 27034049 ~ 27043873 (-)
cry1b LOC103363998,LOC102799801,LOC100703716 coding upstream 454 27229826 ~ 27240938 (-)
uri1 NA coding upstream 426092 27655464 ~ 27669472 (-)
LOC120564488 LOC101485419,LOC102777949,LOC104949269,LOC102291458,LOC100702099 coding upstream 444226 27673598 ~ 27675858 (-)
ccdc113 NA coding upstream 557300 27786672 ~ 27790974 (-)
tbxas1 tbxas1 coding upstream 569634 27799006 ~ 27811080 (-)
G88305 NA non-coding downstream 53695 27169988 ~ 27170267 (-)
G88274 NA non-coding downstream 162826 27060552 ~ 27061136 (-)
G88272 cnot2,LOC104938479 non-coding downstream 167030 27055670 ~ 27056932 (-)
G88245 NA non-coding downstream 219777 27002954 ~ 27004185 (-)
LOC120563588 slc15a5 non-coding downstream 222504 27000941 ~ 27001458 (-)
G88380 panx2 non-coding upstream 127707 27357079 ~ 27358179 (-)
G88381 panx2 non-coding upstream 130424 27359796 ~ 27362901 (-)
G88391 selenoo non-coding upstream 147487 27376859 ~ 27378018 (-)
G88405 NA non-coding upstream 191065 27420437 ~ 27424635 (-)
G88467 NA non-coding upstream 470248 27699620 ~ 27699935 (-)
G88249 mthfs other downstream 209551 27013237 ~ 27014411 (-)
ptprjb.1 NA other downstream 531718 26653636 ~ 26692244 (-)
phrf1 NA other downstream 1576962 25630776 ~ 25647000 (-)
G87897 NA other downstream 1627201 25596353 ~ 25596761 (-)
G87803 NA other downstream 2158474 25064752 ~ 25065488 (-)
G88379 panx2 other upstream 125600 27354972 ~ 27355776 (-)
LOC120564276 LOC103371718,LOC104949276,LOC102797857,LOC100696892 other upstream 394618 27623990 ~ 27650062 (-)
LOC120564781 NA other upstream 582873 27812245 ~ 27824961 (-)
tspan9a tspan9,LOC103365760,LOC106534164,LOC101481610,LOC108237543 other upstream 909914 28139286 ~ 28382715 (-)
G89085 NA other upstream 3492736 30722108 ~ 30722503 (-)

Expression


Co-expression Network