G88379 (panx2)


Basic Information

Item Value
gene id G88379
gene name panx2
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 27354972 ~ 27355776 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU119050
GGGCAACGGCTGCTGTTGTAACTTAGACCCCCCTCCCTTTGGCAGTTTTCTATAGTGATTAACGCCCTCTTGTGGCAGAACTGTTACCTGCAAAGTTCCTTGTGAAGACTAGGGTGACCAGCAGGATGGGGATGATGACCGTCCCTATGGTGACAACACGATCAAAGGGCAGCTCCAGTTTGAGCTGCACCATGAGGCCAGCCAGTAACCCGCCCCTCTCATCCTGAGAGGAGCCGGGCAGGATCAGCTCCTTCAGCTTCTCGCCGGCGAGTAAAGCCGTAGCCATGTCTAGGTTTTGATCGAGGATGTTCTGCATCCGGAACACAAAGGGGACACACTACCACCTCCCTCTGGACTGGAGGGGAGGCCAGACACTCCCTGCTGAAGTTAAAAACTCCTCAACACTgtgtgatacacacacatacactcgcacacaggcacacacacacataaagcaaTGTGTGGCCAAGTTCAGCCCCTGTCACCATACGTGGGGAGGCAGCGGGTCATACTGTGGTAGTCTGTGTTCTTCGGAACTTTGGGTTTTCTACAGTTTCCCACAGCTCTTCTCTTTTAGAAGAACAGGCATAACGTTCAGAAGCACACTTCTCGCTCGGCCTCTTGGGTGTGCATCCTTATGTTTTGCTCCATTTTCTACAGTGCCTGGCCTCAGTCCACACTCAGTCTGTGTGGCAGGTTGAGGAATGAGCTGAGTTTAGGAGGCGTCCTTGCGATCCCCAGGAAGAGTGATTGCTGGCTGAAGACTTGTTACGTGAGCTTCGGTAAGGAGAAGCTCTGACCAATC

Function

symbol description
panx2 Predicted to enable wide pore channel activity. Predicted to be involved in cation transport and cell-cell signaling. Predicted to act upstream of or within ion transport and positive regulation of interleukin-1 production. Located in cytoplasmic vesicle. Is expressed in brain; eye; heart; retina; and spinal cord. Orthologous to human PANX2 (pannexin 2).

NR:

description
PREDICTED: pannexin-2 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU119050 True 805 TUCP 0.53 1 27354972 27355776

Neighbor

gene id symbol gene type direction distance location
cry1b LOC103363998,LOC102799801,LOC100703716 coding downstream 114034 27229826 ~ 27240938 (-)
si:ch73-62b13.1 LOC104935271,LOC103361117,LOC104951776 coding downstream 152047 27190915 ~ 27202925 (-)
etfbkmt etfbkmt coding downstream 211661 27135856 ~ 27143311 (-)
washc4 kiaa1033 coding downstream 277139 27061216 ~ 27077833 (-)
lrrc10 lrrc10 coding downstream 304145 27049172 ~ 27050827 (-)
uri1 NA coding upstream 299688 27655464 ~ 27669472 (-)
LOC120564488 LOC101485419,LOC102777949,LOC104949269,LOC102291458,LOC100702099 coding upstream 317822 27673598 ~ 27675858 (-)
ccdc113 NA coding upstream 430896 27786672 ~ 27790974 (-)
tbxas1 tbxas1 coding upstream 443230 27799006 ~ 27811080 (-)
tspan33b LOC104940279,LOC100694777,LOC101482493,LOC106573176,LOC105926564 coding upstream 821026 28176802 ~ 28192660 (-)
G88305 NA non-coding downstream 184705 27169988 ~ 27170267 (-)
G88274 NA non-coding downstream 293836 27060552 ~ 27061136 (-)
G88272 cnot2,LOC104938479 non-coding downstream 298040 27055670 ~ 27056932 (-)
G88245 NA non-coding downstream 350787 27002954 ~ 27004185 (-)
LOC120563588 slc15a5 non-coding downstream 353514 27000941 ~ 27001458 (-)
G88380 panx2 non-coding upstream 1303 27357079 ~ 27358179 (-)
G88381 panx2 non-coding upstream 4020 27359796 ~ 27362901 (-)
G88391 selenoo non-coding upstream 21083 27376859 ~ 27378018 (-)
G88405 NA non-coding upstream 64661 27420437 ~ 27424635 (-)
G88467 NA non-coding upstream 343844 27699620 ~ 27699935 (-)
zgc:153031 LOC100703984,LOC102237950,LOC106523206,LOC105917737 other downstream 125600 27223962 ~ 27229372 (-)
G88249 mthfs other downstream 340561 27013237 ~ 27014411 (-)
ptprjb.1 NA other downstream 662728 26653636 ~ 26692244 (-)
phrf1 NA other downstream 1707972 25630776 ~ 25647000 (-)
G87897 NA other downstream 1758211 25596353 ~ 25596761 (-)
LOC120564276 LOC103371718,LOC104949276,LOC102797857,LOC100696892 other upstream 268214 27623990 ~ 27650062 (-)
LOC120564781 NA other upstream 456469 27812245 ~ 27824961 (-)
tspan9a tspan9,LOC103365760,LOC106534164,LOC101481610,LOC108237543 other upstream 783510 28139286 ~ 28382715 (-)
G89085 NA other upstream 3366332 30722108 ~ 30722503 (-)
G89241 NA other upstream 3887392 31243168 ~ 31268469 (-)

Expression


Co-expression Network