G88596


Basic Information

Item Value
gene id G88596
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 28518156 ~ 28523417 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU119384
ACTGAATAGAGTTGTATGTAGAAGCATCTCCAGTAtgactatgatttttttatttttttttttttttttttagccgtTCCTGCTTCCTCACCTTGTTGGTACGCGTACATGACGTGGACGCAATAACAACCGGCTGTAAAATGCGTTCAGTTGGCGTTGCGACTGGGATGTTTGGATTGAACGATTAGATTAGTTACGTGGCGTTGCAGTGTATTGCACCGGTGTCTTTAGTTTCTTCACCTTGTGGATGAACTAAAAGCAAAAGTACTGCCacgcagcacagcacagaaGTCATGtgcttctgtgtttgtctgctgaataaagaaaaaatgatCATGTAGTTTGTTGCAGGGCtgtcatatttaatattttattttacaggcgtgggtgtttttttttttttttttctttgtcatctgtaCATTAATATTGGTTTGTaattctgttgtttttgttgtaacAGTACTGAAGGTTGTTAAGATACCTGAGCCCCCCCCTACAGACCGAATGAAGTTTAGTgcagacatttttatttcatataaCCTTAATCTGCCTCATTGCCAagtattttatgaaaattgttGTCGCTATATGTAATCTGTACGTTACAGGAAGGTTCAAATTTGAAAGGTTTTGGTGAAAAGTTCCGATTTTTACTGTTTGATATTGCACTATGGTCACTAATAGTGCTCCACTACTGCCAGTGTCTTGCACATCACTTTAATCTACATATAAACATGTAAATGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU119384 True 748 lncRNA 0.37 2 28518156 28523417

Neighbor

gene id symbol gene type direction distance location
tspan33b LOC104940279,LOC100694777,LOC101482493,LOC106573176,LOC105926564 coding downstream 325496 28176802 ~ 28192660 (-)
tbxas1 tbxas1 coding downstream 707076 27799006 ~ 27811080 (-)
ccdc113 NA coding downstream 727182 27786672 ~ 27790974 (-)
LOC120564488 LOC101485419,LOC102777949,LOC104949269,LOC102291458,LOC100702099 coding downstream 842298 27673598 ~ 27675858 (-)
uri1 NA coding downstream 848684 27655464 ~ 27669472 (-)
utp4 utp4 coding upstream 435973 28959390 ~ 28974789 (-)
has3 has3 coding upstream 465538 28988955 ~ 29018749 (-)
tango6 tango6 coding upstream 500860 29024277 ~ 29067687 (-)
c8h11orf49 LOC104936424,LOC102313439 coding upstream 762299 29285716 ~ 29295960 (-)
LOC120564361 LOC103374757 coding upstream 831897 29355314 ~ 29363745 (-)
G88513 NA non-coding downstream 535862 27975965 ~ 27982294 (-)
G88510 NA non-coding downstream 542495 27975181 ~ 27975661 (-)
G88467 NA non-coding downstream 818221 27699620 ~ 27699935 (-)
G88405 NA non-coding downstream 1093521 27420437 ~ 27424635 (-)
G88391 selenoo non-coding downstream 1140138 27376859 ~ 27378018 (-)
G88613 NA non-coding upstream 269295 28792712 ~ 28792984 (-)
G88625 zc3h18,LOC102790709 non-coding upstream 334054 28857471 ~ 28940229 (-)
G88636 NA non-coding upstream 364587 28888004 ~ 28889684 (-)
G88706 NA non-coding upstream 567613 29091030 ~ 29093595 (-)
G88709 NA non-coding upstream 574852 29098269 ~ 29098610 (-)
tspan9a tspan9,LOC103365760,LOC106534164,LOC101481610,LOC108237543 other downstream 135441 28139286 ~ 28382715 (-)
LOC120564781 NA other downstream 693195 27812245 ~ 27824961 (-)
LOC120564276 LOC103371718,LOC104949276,LOC102797857,LOC100696892 other downstream 868094 27623990 ~ 27650062 (-)
G88379 panx2 other downstream 1162380 27354972 ~ 27355776 (-)
zgc:153031 LOC100703984,LOC102237950,LOC106523206,LOC105917737 other downstream 1288784 27223962 ~ 27229372 (-)
G89085 NA other upstream 2198691 30722108 ~ 30722503 (-)
G89241 NA other upstream 2719751 31243168 ~ 31268469 (-)
G89365 NA other upstream 3583206 32106623 ~ 32108066 (-)
fa2h fa2h,LOC106937201,LOC102797665,LOC107674969,LOC107707436,LOC107589178,LOC104955910,LOC107714073 other upstream 4263381 32786798 ~ 32851495 (-)
znf319b znf319,LOC102797175 other upstream 4382588 32906005 ~ 32913030 (-)

Expression


Co-expression Network