znf319b (znf319,LOC102797175)


Basic Information

Item Value
gene id znf319b
gene name znf319,LOC102797175
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 32906005 ~ 32913030 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU120579
tattctgTCAAACAGGGAAATTCAGACTGTAGAGAATTGTATTAGAAATATTTCAGcagaccttttttgtttttaaatgtactaATCTTACTGGTCTGCCCGAGTTGGTTTTTGCAGGATGAACCTGCACTTTGTGTTAAATATTTTCCATGTTTTGAAAGAAGTTTTAATACTCAGTTTTTCCTGTTACATGTTGAGCTGTGTCTGTCAGTGGGTTTATACCAGAGTGAATGACGCCTTCCTCGTCTTTGAATGCTATGAGATTCTAGTTGTGCTTAAGAAGCCCAGAGAACAAGTTGGTTTACATGTCCGCTGTGATCGCCATGGTTCCTTTTCATCTGCGGAGCGGTTCCCTCTCTCACTGTTGAATCATGGTTTGAGTGCAgtattgaaaacaaagaagacggaagtaacattttttattttattttttttattccggcTTGCAattctttcctttttgttttagcCTTAAAATGAGGCCACGGTGCCTCTCTGCCTCTTCCTTCTCTTctgctttctgtctctgtccatcattatcatcatcatgtgAGCTCAGATAGTTGGTTTCATTAGccatcatatttttattttctgaatcTGGCATAAGACTGAGAACACCTTGGACTTAAATAAGTACTGTATGCTTTTTTATGGTTTCacatgtgtttgtattttttttattttttattaatcttTTAATTTGATATTAAAATCTATATTCCTCGATGGAGAGACCAGGGCCTTGGGTTGGTTTGGGATAAATAtggcagtatttttttttttttaaatacgtcTGCCAGAGTTGTACTCGAGCTTTTCACAATGTAGGTTTGTTTCTAAGCCAAATCCCAGAAGAAACCATCTCTGCACAAAGAATTCGGTAGGGTGGTGGtgtaaaagttgaataatacaacacaaacacatcaggAATCGATACACGCGGGTTCATATTTGCCAAGTGCTGGAGGACTTTGACTTGTTAATTGGTGCTGACACATCATCATGATgtgcataataaaaaaaatagtcacTCCAGGTGCAGGACAAGGGCCTCACACACTACCATATAGTGCAGACGGTACACTTAATATGTACTAATAGTACAAGTGTACGCTCAAAGCCTAAGAATAATTCCAGCCCAGTGGCACTGGTTTAGTCGCTTGTATTGCTGAGGGTGACTGTCTGGTAGTGCATTACTCCTGTGTGTGTTATAGAGTGCTGATCAGATATAGGTACAACATTAACTGACAGTGAGGAATATTGCAAAGTGAAAACAAGAACTGCACTTGTTACATCTCGATCAATTCTGGGTTTAAAAACTCCACATCCAACGCAGTCAGGGAAAGGAGAGGAAAATCTCCGGTCTAagcacaaatgaaataaatccaCCCTTCTGCATTTTAACTGGTGGTTGGTCCCCCCGCCATCCTTTCCTTTTCAGTTCCAATAAATGAACCCGTCAGACCCTGGTGTCTCTAGCTCTCTGCATGCTCGCTGTGATAGTTCCTGTGTTCTGTCCCTG
>XM_039809254.1
TGGTTTATTCATGTTCCCGTGCGCGGGCAGGGGCTCAGAAGCTAGgcgatagctagctagcaattTATAACAAAATGTATACGTTTTCGTTTGCCGAGAGAATGCCCTAGGAGCACAGCAGCCAAAGAAATGTTTACGTAAAACGATACCGCTTATTTGGGAAATTGCGAAATAATCTTTTGCCCATTTTAATGACCagtaaatctcttttttttcggCCCCTGGAGCCACAGCGCTCGAACAAGAGAGCATCCGAGCACCGTTTGCGGATGTGAAGAAGTGACCTGTTATTTGGGGGAGTAACGTCAGCTAACCTACAGTAGTATTTGACTGGACGCTCCAGATACCACTTGAAGGCCACAAATGAAGTGAAAGCAGGGGATTTTCTTCCATCTTTCCCCACAGGTCTGATCTCCACACAGCTGTTCTCCTCTGCACTAGCTAAATCCTCCATCACAGCCCCTTCACCAAGCACCCTTGCCAGCTCTTCAGTTCCACTTGCTGAAATGGATTGGGCCACACCAGCTGCCAAACTGAATCCCTACACCCGAGCCCGCATGACAGAGGCCTGGCAGCAGCACGCAGTTGCTCCACCTCCAGTCGTCCACACCATCCCTCCAGGAGCTGAGAATGCGTTGGGCTGTGCAGTGTATGGCATTGTCCTGCAGCCAGATGCTACGTCTTTACAGCAGCAGCCACAGACCCAGCACGGACAGCACAGCCAACACAGCCAACAACACAGCGGGAGTCAGCAGCATGGAGGCGGGCAGCACAGTCAGCAGCAGCACCCCGCCCAGGCCCAGCAGACCTCACTACAGGTAGGGACCGAAGGAGGACACAAGTGTGGGGCCTGTGGACATGATATCTCCCACTTGGCCAACCCACATGAGCACCAGTGCATGGTGAATCAGGACAGGTCATTCCAGTGCACTCAGTGCATGAAGATTTTCCACCAGGCGACAGACCTGCTAGAACACCAGTGTGTTCAGGTGGAGCAGAAGCCgtttgtgtgtggggtgtgtaaGATGGGCTTCTCCCTACTCACCTCTTTAGCCCAGCACCACACATCCCACAACAGCACCAACCCACAGAAGTGTTCAATATGTGAAAAGACCTACCGACCCGGATCTTCTGGCAACGTCACACCCAACTCAAATAATCCCCAGCAGCCCAACAGTGACGGGGCGTCAGCAAGCAGCAGCTCATCCATTCTACCCTTTCCCTCAGCCCGAGACCGGCCGTACAAATGCTCCGTTTGCCAGAAGGGCTTCAAACACCTGTCAGAACTCACACGGCATGAGAGGGTGCACACGGGAGAGAAGCCCTTCAAATGTGACACATGTGACAAGGCCTTCAGCCAGTCGTCGCACCTGCAGCACCACCAGCGAACACACAGCAGCGAACGCCCGTTCAAGTGTGCCGTTTGTGAAAAGAGTTTCAAGCACCGCTCCCACCTCGTGCGCCACATGTATGTGCACTCTGGGGAGCACTTGTTCAAATGCAACTTATGTGAGCTGCATTTCAAAGAGTCGTCGGAGCTCCTTCACCACCCCTGCCACCCGCAGGGTTCCCGCCCGTTCCGCTGTGCCACGTGTGGTAAGGGTTTCAAGCGGCCGTCCGACCTTCGGCAACACGAGCGCACGCACTCGGAGGAGCGCCCCTACCACTGTGATGAGTGTCAGATGAGCTTCAAACAGCAGTACGCACTGGTGCGCCACcgacgcacacacaaagacccTACTGACCGGCCGTTCAAATGCAATCTGTGTGACAAGGGCTTCATGCAGCCCTCTCACCTCCTGTACCACCAGCACGTCCACGGCATGGACAACCTGTTCAAGTGCGCCTCGTGCCAGAAGGAGTTTAGCCAGTCGGGAGAGCTGCTCAGGCACAAGTGTGGCGAGTCGTCCAACACCTCGCCCGACAAGCCGTACAAGTGTGACGTCTGCGGCAAGGGCTACAAGAAGGGGTCGACGTTACAGCGTCATCAAAATTCTCACTGCCAAGAGAAGCCCCTTAAGTGCTCGCTGTGTGACCGCCGCTTCCTGTCTTCTTCGGAATTTGTCCAGCACCGCTGCGACCCTTCGCGGGAAAAGCCGCTGAAGTGCCCTGACTGTGAGAAACGTTTCAAATACTCATCAGACCTGAACCGACACCGGCGCGTGCACACAGGGGAGAAGCCGTACAAATGCGGCCACTGCAACAAGGGCTTCAAACAGCGCGAGCACCTGACCAAACACGCGAGCACACACTCCAGAGAGGGCCAGTTCAAGTGTGTTTGGTGTGGCGAGCGTTTCAGTGACTTGGGCTCTTTGCAGGATCACACTGtgcagcacacagctgatggagGGGGTTACCCAGTGCCCCAGTGCATATAAATCCATTTTCCCTTGAACAGACAGTCCCCTAAACTCCTGTCTCCTCATCCATCCCTTGTAGGCTATTTATTCAGCCTATCTCCACATTTGCAAGACAGTCCAGGCTATTATTATTGCATTCATTACTACCAGTGATACAtcaagtttttgttgctttactAACCTGCCCGAAGCCCTTTAGTACTTTAGCGCTTTTATTTCATAAGATCCTGAGCGTTTCTCACTCCCTGCACTTTCCTCTTTGTTCCacctctttttcttcttataCCTGACCTCTACCCTTTTTTCTCAGCCCCACAATTAGATAGTTGATAGCAGTGAAGAGGCCACAACCACTTAAACTGCCGTAAGTCATACTTAGGCTGCATTCACATCAAATCAGGCATTGTGCAGTGGTGTGGGAGTGGCCCATTTGTTTCTCCATTGTGTTCCCATGGTGCTAGCATTTAGCCATGCTGCTAGTATGCCGGGTACTACGAGTGACTGTCTGTCCACATTGACAGATTTAATAgataaaaaacatttactttCAATAACTACCCAGGATGCAAGGCAGGGCTTAACATTATGGTGGGATTTAAACTGGTGCACAAGGAAAAATTTAGGGATTACCCGTGAATCATGATGTTACactacattgtttttttgtatgatTGACAGTTAAGTGATATGTCACCACAGCGTGACgtcgggttgcgtttctccaagaATTTAATGTATCTCAACTTTTCAGCATACCCTGCGGTCCCCACCGCCGTAGCCTAAATGCACTTCCCACATTCAAATGAATTGGAGGACTGGCGTTTTTGTGGCAACTCCTGATTTGTAGTTAATGCAGCCTTAATCAGACTGTTGGAGACAGAAATAGGTTCCATAATGCAAGTTGATCCAGCATATATATCCCTCCTAAATTTCTCCCctcagaaaaggaaagaaaaatgtaaatgtcccTTAATTGTTATATAAGACAGACatagttttttgtgtgtgtttttaagtaGTTTGGCATCAAGTATGTTTTAAGGTTTACTGAATAAATCAATAGAGTTCAGCATCCACCTAAACTGACGGGGCTAAAGACTTGAAAGTCTTGACTGCTAGAGTGTCCACTAGAGGGGGatcatttccttgtttttaTCCTCCCACCTCTCTTTCTCCGATGACCTCTTTTCCCCGCTCTTAAATTACTCCCCTCCCCTCATTCTTCCTCTCATCtttgcttcctcctcttcctgtcgTAGCCTGTCGCTGTTTAGTATTGGAAGACTGGGAAGTTTGACTAACCCCTCAGCCACTTTTGGTTTTCATCTCCCCACAGTAATTCAGAAACTTTGAATTGTCCTGACCTGACTCCCTGTGTccacatcacttttttttctttttttttcttccatgaAATAGCCAGTAAACTCCCTCAACGTATGTGAAGGGAAACCATGTAGGGGGGAGTTTGGGGATTAATTGTCCTATAGTGAAATACCAAAACACCAGTATGAAGAGGCAGCACCTGATCCCAAAGGTGTGTAGACTAACCAACCAGATGAAGTTAACCAtcaataataagaaaaaaactgaTTATTGATACCAATCTCGCACTCCAGTATAGACAACTAATAGAAGCATATCTTTCTCACTAATATAATGGTCATATTCCTGCAGACATCAGTACGACTTCTTTGTACTGAAAATGTCCAAGTTTGAACATTACACTTCCTCTCTCAGCCTGTACATACTATGGATCTGTGGGTGTACTTAGCCAGGTAAGTTGAAAATGTCAGAACTAGTCTTTCTTAAAAAACAATATGTAAGAGCTGTTTTTGTATTCTTGCTACTTTTTACTATGTGAAACGTTTGGACaaatgctctttttttctttttgtagtcCATGTAGTGATTGTATCGGTATGTTGCAGGGAATCtcaaaggggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttttattctgTCAAACAGGGAAATTCAGACTGTAGAGAATTGTATTAGAAATATTTCAGcagaccttttttgtttttaaatgtactaATCTTACTGGTCTGCCCGAGTTGGTTTTTGCAGGATGAACCTGCACTTTGTGTTAAATATTTTCCATGTTTTGAAAGAAGTTTTAATACTCAGTTTTTCCTGTTACATGTTGAGCTGTGTCTGTCAGTGGGTTTATACCAGAGTGAATGACGCCTTCCTCGTCTTTGAATGCTATGAGATTCTAGTTGTGCTTAAGAAGCCCAGAGAACAAGTTGGTTTACATGTCCGCTGTGATCGCCATGGTTCCTTTTCATCTGCGGAGCGGTTCCCTCTCTCACTGTTGAATCATGGTTTGAGTGCAgtattgaaaacaaagaagacggaagtaacattttttattttattttttttattccggcTTGCAattctttcctttttgttttagcCTTAAAATGAGGCCACGGTGCCTCTCTGCCTCTTCCTTCTCTTctgctttctgtctctgtccatcattatcatcatcatgtgAGCTCAGATAGTTGGTTTCATTAGccatcatatttttattttctgaatcTGGCATAAGACTGAGAACACCTTGGACTTAAATAAGTACTGTATGCTTTTTTATGGTTTCacatgtgtttgtattttttttattttttattaatcttTTAATTTGATATTAAAATCTATATTCCTCGATGGAGA

Function

symbol description
znf319 Predicted to enable DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus.

NR:

description
zinc finger protein 319-like isoform X1

GO:

id name namespace
GO:0046872 metal ion binding molecular_function
GO:0003676 nucleic acid binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120579 False 1525 lncRNA 0.40 1 32906005 32907529
XM_039809254.1 True 5186 mRNA 0.47 3 32906795 32913030

Neighbor

gene id symbol gene type direction distance location
csnk2a2b csnk2a2 coding downstream 1247 32891103 ~ 32904758 (-)
ano10b LOC100712256,LOC102306304,LOC101466670,LOC108246906 coding downstream 124903 32762681 ~ 32781102 (-)
LOC120564556 NA coding downstream 312179 32578557 ~ 32593826 (-)
LOC120564368 LOC107714737 coding downstream 333282 32570069 ~ 32572723 (-)
tcp11l1 tcp11l1,LOC102792814 coding downstream 343275 32552579 ~ 32562730 (-)
pla2g15 LOC103379465 coding upstream 6423 32919453 ~ 32932296 (-)
lcat lcat,LOC103142508 coding upstream 19392 32932422 ~ 32943568 (-)
map1lc3b map1lc3b coding upstream 391684 33304714 ~ 33318901 (-)
det1 det1 coding upstream 417805 33330835 ~ 33346374 (-)
ranbp10 ranbp10 coding upstream 479304 33392334 ~ 33433329 (-)
G89522 NA non-coding downstream 43439 32862300 ~ 32862566 (-)
G89395 NA non-coding downstream 594894 32310897 ~ 32311111 (-)
LOC120563490 NA non-coding downstream 634288 32271247 ~ 32271717 (-)
G89385 NA non-coding downstream 638990 32261973 ~ 32267015 (-)
G89369 NA non-coding downstream 722286 32180785 ~ 32183719 (-)
G89577 NA non-coding upstream 79059 32992089 ~ 32993049 (-)
G89586 NA non-coding upstream 85206 32998236 ~ 32998466 (-)
G89588 NA non-coding upstream 90063 33003093 ~ 33003625 (-)
G89589 NA non-coding upstream 103918 33016948 ~ 33017183 (-)
G89615 NA non-coding upstream 202756 33115786 ~ 33116906 (-)
fa2h fa2h,LOC106937201,LOC102797665,LOC107674969,LOC107707436,LOC107589178,LOC104955910,LOC107714073 other downstream 54510 32786798 ~ 32851495 (-)
G89365 NA other downstream 797939 32106623 ~ 32108066 (-)
G89241 NA other downstream 1637536 31243168 ~ 31268469 (-)
G89085 NA other downstream 2183502 30722108 ~ 30722503 (-)
tspan9a tspan9,LOC103365760,LOC106534164,LOC101481610,LOC108237543 other downstream 4523290 28139286 ~ 28382715 (-)
G89849 mmyhl2,mmyhl1 other upstream 1311231 34224261 ~ 34225516 (-)
G89870 LOC105899468,LOC106564289,LOC105009107,LOC106597831,LOC106591119,LOC103392864,LOC106597772 other upstream 1377773 34290803 ~ 34331996 (-)
G89873 LOC100698998,LOC102198497,LOC102789814,LOC102294989,LOC101481490 other upstream 1401501 34314531 ~ 34315143 (-)
LOC120563661 LOC102294989,LOC101481490 other upstream 1467031 34380061 ~ 34446136 (-)
psme3ip1 fam192a other upstream 1682179 34595209 ~ 34612162 (-)

Expression


Co-expression Network