si:ch73-62b13.1 (LOC104935271,LOC103361117,LOC104951776)


Basic Information

Item Value
gene id si:ch73-62b13.1
gene name LOC104935271,LOC103361117,LOC104951776
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 27190915 ~ 27202925 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039807387.1
CTAGAGACTGAGCTCCAGTAGCCCGTGTGGTCTCCGGAGGGGAGAGACATGCCTCCTCCTCGCGCAGCCTCGCGCCCCTCTCTATCCATGGCGCATCTCCAGCTCTGAATCCACTTCGGCTCTGGACACACCGGCGGCAGCGCTCGAtccaaacataaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacactagaggaGGACTAGACCGGCCGAAGAAATCCGATCGAGTGCGTTGATGCGTGAAGGATGTAGAGCCAGAGGGGGGCAGGATGGAGTGCTCCTGGAAGacggtgctgctgctggtgtgtgcgtctctTGGGGTCCAGTACACGGCCATCCGGACCCTGAGGGACTCTCTGTCTGGGCCCTGTCAGGGAACCTACCGCTGCCAGACCAGACACCACAGAGACTCCAGATGGAGAGCCTTGTGTGATGACAGTTGGATGCCAGTTGAGTCGCCTCGGAAGCACATCCTGCTGTTTGCCACCACGCGCAGCGGCTCCTCCTTCACCGGGCAGCTCCTCAACCAACACCCAGGGATCTTCTATGTGTTTGAACCTCTCTACCATGTCCAGCAGGCCTTCACCAACTCCAGCAGCAGGTTGCGTCGCACCCTGGACCGCCGGGCCCTACTGGGAGCGTACAGAGACCTCCTCCTCAATCTGTACACCTGTGATCTTCACTTCATGGAGAACTACATCCGCCCGGAGCCCCGGGACCACGTCACAAGCTCCTACTTCCGCCGAAGCTCCAGCCACGCGCTCTGTTCCCCTCCCGTGTGCTCGGAAGGAGGGGACGTAGCGGCCTCTGATCTGCCCGATGAAACGTGGTGTCCTAAGAAGTGCGGGGCCCTAAACCTTACCCTAGCCTCCATGTCATGTCTGTCAAGGGAACACGTAGCCATAAAGACTGTGCGGGTCCCTGAGGTGGGAGACCTGCGCACCTTGACAGAAGATCCACGCCTGGACCTGAAGATCATCCACCTGGTGAGAGACCCCAGAGCCGTCCTCGCCTCACGCATGATGGCGTTTTCAGATCAATTCCGCGCTTGGAAGATATGGAACGCGACCGGGCGGCAGCCTCGATACGTGGACCTGACGCAGATCACCAGCACCTGCAAGGACATGGCTGCCTCCGCAGAAACAGGCCTGCAAAGACCGGCATGGCTGCGGGGACGCTACCTGCTGGTGCGGTACGAGGACCTGGCGTTCAATCCGAAGGACAAGGCCACTGAGATCTACAGGTTTGTGGGGCTGGAGATGGAGGACAGGGTGCGGCTGTGGATTGCAAAGAACACCAACAGTAATGGGTCGTCTCCGTCAGAGTGGAACTACAGGTACTCCACCACCAGAGACTCCAGGGCGACAGCAGAGAGCTGGAGGCTTCGTCTGGGCTTTGACATCGTGAGGACTGTGCAGAATCTGTGCAACGACACTCTGGCCCTGCTGGGATACAAGCAGGTTCACTCTGCAGCTGAACTCCGAAACTTGTCTCACAGTTTAGTGGAACACAGGACCTTTCAACCAGTCACATGGTAGAAAAAAACGTTactgtttatttctttatttcagcTGACTTTCCTCTCTGTCATGATGCTGATAACATGAATGTAATTTATCTTATTTTTCAATAACGCCTAAACTGATATCACTTTTTATGGTTTTGTTAAAGATATTAAAAGTGCCAAATGTCAAGCGTGTGTGATGCTGGAAAAAGTATTGATCCAGAATTAAGTCCATACTgctgtatgtgttgattgaaaaTTCTTCttgaattcaatttcaatttcaatttttttgaaTTCTTCAATGAATTGAATTTTAGTATTTAAACAGGGGGGGAAAGACAGTCGAAAGAGCCCAGGTACCATTTCAGAGTAAATCTGACCCTAAATCAGACACACAGGAAGGGGGATGTatttgtcaaataaataaataaattataggGCTTGCCTTCCAAGTATCTCTAATGCATTTTTGGAAAAGGATTAAAATGTCACGTTGTAGGAAGAATATCTTCTGCAGAGCACTGCAGCTCTAATTTCTATGTGAAGATGGGTCTCATAGaaccaaggtttttttttttgtaaatactgATTAACTGTTGCAATGCAAGTGTGCAAATGTTATGTGCTGGATGTGTTTGAACATTTTATTGTCACTGTAACAATACTGTTTATATTTTCTAGACTTtttcaaataaattattaatatgTAAGTATTTGTCACGCTGCTGAAATCTTGAAACCGCatttgtttgatgtgttttcttCAAATCTGAGACAAAAGCGGATTCGAGTTTTGGTGCTGAAAACCGAGAACGGTACAAAATCCATTGTCTTTTATCTTGAAATCCCTCTGTATTTGGCTTGTCTT
>XM_039807388.1
cttttcttcagctTGTTGTTGCATTTTACGCGCAGCGAGCACTAGCCGGACTGTTACCTAACAAACAAGATATGCTGTAATCCAATCGGACAGAGAGTATAGTCTATCACGTTAATGAGGATAGTAAGAAGATCAGTAAATTATTTCTCCACACAGCGACTTAAAGTGTGTCTGCGCTACTCAAGGCGTGAAGGATGTAGAGCCAGAGGGGGGCAGGATGGAGTGCTCCTGGAAGacggtgctgctgctggtgtgtgcgtctctTGGGGTCCAGTACACGGCCATCCGGACCCTGAGGGACTCTCTGTCTGGGCCCTGTCAGGGAACCTACCGCTGCCAGACCAGACACCACAGAGACTCCAGATGGAGAGCCTTGTGTGATGACAGTTGGATGCCAGTTGAGTCGCCTCGGAAGCACATCCTGCTGTTTGCCACCACGCGCAGCGGCTCCTCCTTCACCGGGCAGCTCCTCAACCAACACCCAGGGATCTTCTATGTGTTTGAACCTCTCTACCATGTCCAGCAGGCCTTCACCAACTCCAGCAGCAGGTTGCGTCGCACCCTGGACCGCCGGGCCCTACTGGGAGCGTACAGAGACCTCCTCCTCAATCTGTACACCTGTGATCTTCACTTCATGGAGAACTACATCCGCCCGGAGCCCCGGGACCACGTCACAAGCTCCTACTTCCGCCGAAGCTCCAGCCACGCGCTCTGTTCCCCTCCCGTGTGCTCGGAAGGAGGGGACGTAGCGGCCTCTGATCTGCCCGATGAAACGTGGTGTCCTAAGAAGTGCGGGGCCCTAAACCTTACCCTAGCCTCCATGTCATGTCTGTCAAGGGAACACGTAGCCATAAAGACTGTGCGGGTCCCTGAGGTGGGAGACCTGCGCACCTTGACAGAAGATCCACGCCTGGACCTGAAGATCATCCACCTGGTGAGAGACCCCAGAGCCGTCCTCGCCTCACGCATGATGGCGTTTTCAGATCAATTCCGCGCTTGGAAGATATGGAACGCGACCGGGCGGCAGCCTCGATACGTGGACCTGACGCAGATCACCAGCACCTGCAAGGACATGGCTGCCTCCGCAGAAACAGGCCTGCAAAGACCGGCATGGCTGCGGGGACGCTACCTGCTGGTGCGGTACGAGGACCTGGCGTTCAATCCGAAGGACAAGGCCACTGAGATCTACAGGTTTGTGGGGCTGGAGATGGAGGACAGGGTGCGGCTGTGGATTGCAAAGAACACCAACAGTAATGGGTCGTCTCCGTCAGAGTGGAACTACAGGTACTCCACCACCAGAGACTCCAGGGCGACAGCAGAGAGCTGGAGGCTTCGTCTGGGCTTTGACATCGTGAGGACTGTGCAGAATCTGTGCAACGACACTCTGGCCCTGCTGGGATACAAGCAGGTTCACTCTGCAGCTGAACTCCGAAACTTGTCTCACAGTTTAGTGGAACACAGGACCTTTCAACCAGTCACATGGTAGAAAAAAACGTTactgtttatttctttatttcagcTGACTTTCCTCTCTGTCATGATGCTGATAACATGAATGTAATTTATCTTATTTTTCAATAACGCCTAAACTGATATCACTTTTTATGGTTTTGTTAAAGATATTAAAAGTGCCAAATGTCAAGCGTGTGTGATGCTGGAAAAAGTATTGATCCAGAATTAAGTCCATACTgctgtatgtgttgattgaaaaTTCTTCttgaattcaatttcaatttcaatttttttgaaTTCTTCAATGAATTGAATTTTAGTATTTAAACAGGGGGGGAAAGACAGTCGAAAGAGCCCAGGTACCATTTCAGAGTAAATCTGACCCTAAATCAGACACACAGGAAGGGGGATGTatttgtcaaataaataaataaattataggGCTTGCCTTCCAAGTATCTCTAATGCATTTTTGGAAAAGGATTAAAATGTCACGTTGTAGGAAGAATATCTTCTGCAGAGCACTGCAGCTCTAATTTCTATGTGAAGATGGGTCTCATAGaaccaaggtttttttttttgtaaatactgATTAACTGTTGCAATGCAAGTGTGCAAATGTTATGTGCTGGATGTGTTTGAACATTTTATTGTCACTGTAACAATACTGTTTATATTTTCTAGACTTtttcaaataaattattaatatgTAAGTATTTGTCACGCTGCTGAAATCTTGAAACCGCatttgtttgatgtgttttcttCAAATCTGAGACAAAAGCGGATTCGAGTTTTGGTGCTGAAAACCGAGAACGGTACAAAATCCATTGTCTTTTATCTTGAAATCCCTCTGTATTTGGCTTGTCTT
>XM_039807389.1
TGCTCGCTGCTCTCAGGTGTAATTAAGAAACACAGAAAGATCCCCGGGAGGCCCGGCAGAGTGCCGAGGAATCAGCACGCCTCAGAGAACAGCAAGATCCAGCAGCAGGCTTCCTTCGCGTGAAGGATGTAGAGCCAGAGGGGGGCAGGATGGAGTGCTCCTGGAAGacggtgctgctgctggtgtgtgcgtctctTGGGGTCCAGTACACGGCCATCCGGACCCTGAGGGACTCTCTGTCTGGGCCCTGTCAGGGAACCTACCGCTGCCAGACCAGACACCACAGAGACTCCAGATGGAGAGCCTTGTGTGATGACAGTTGGATGCCAGTTGAGTCGCCTCGGAAGCACATCCTGCTGTTTGCCACCACGCGCAGCGGCTCCTCCTTCACCGGGCAGCTCCTCAACCAACACCCAGGGATCTTCTATGTGTTTGAACCTCTCTACCATGTCCAGCAGGCCTTCACCAACTCCAGCAGCAGGTTGCGTCGCACCCTGGACCGCCGGGCCCTACTGGGAGCGTACAGAGACCTCCTCCTCAATCTGTACACCTGTGATCTTCACTTCATGGAGAACTACATCCGCCCGGAGCCCCGGGACCACGTCACAAGCTCCTACTTCCGCCGAAGCTCCAGCCACGCGCTCTGTTCCCCTCCCGTGTGCTCGGAAGGAGGGGACGTAGCGGCCTCTGATCTGCCCGATGAAACGTGGTGTCCTAAGAAGTGCGGGGCCCTAAACCTTACCCTAGCCTCCATGTCATGTCTGTCAAGGGAACACGTAGCCATAAAGACTGTGCGGGTCCCTGAGGTGGGAGACCTGCGCACCTTGACAGAAGATCCACGCCTGGACCTGAAGATCATCCACCTGGTGAGAGACCCCAGAGCCGTCCTCGCCTCACGCATGATGGCGTTTTCAGATCAATTCCGCGCTTGGAAGATATGGAACGCGACCGGGCGGCAGCCTCGATACGTGGACCTGACGCAGATCACCAGCACCTGCAAGGACATGGCTGCCTCCGCAGAAACAGGCCTGCAAAGACCGGCATGGCTGCGGGGACGCTACCTGCTGGTGCGGTACGAGGACCTGGCGTTCAATCCGAAGGACAAGGCCACTGAGATCTACAGGTTTGTGGGGCTGGAGATGGAGGACAGGGTGCGGCTGTGGATTGCAAAGAACACCAACAGTAATGGGTCGTCTCCGTCAGAGTGGAACTACAGGTACTCCACCACCAGAGACTCCAGGGCGACAGCAGAGAGCTGGAGGCTTCGTCTGGGCTTTGACATCGTGAGGACTGTGCAGAATCTGTGCAACGACACTCTGGCCCTGCTGGGATACAAGCAGGTTCACTCTGCAGCTGAACTCCGAAACTTGTCTCACAGTTTAGTGGAACACAGGACCTTTCAACCAGTCACATGGTAGAAAAAAACGTTactgtttatttctttatttcagcTGACTTTCCTCTCTGTCATGATGCTGATAACATGAATGTAATTTATCTTATTTTTCAATAACGCCTAAACTGATATCACTTTTTATGGTTTTGTTAAAGATATTAAAAGTGCCAAATGTCAAGCGTGTGTGATGCTGGAAAAAGTATTGATCCAGAATTAAGTCCATACTgctgtatgtgttgattgaaaaTTCTTCttgaattcaatttcaatttcaatttttttgaaTTCTTCAATGAATTGAATTTTAGTATTTAAACAGGGGGGGAAAGACAGTCGAAAGAGCCCAGGTACCATTTCAGAGTAAATCTGACCCTAAATCAGACACACAGGAAGGGGGATGTatttgtcaaataaataaataaattataggGCTTGCCTTCCAAGTATCTCTAATGCATTTTTGGAAAAGGATTAAAATGTCACGTTGTAGGAAGAATATCTTCTGCAGAGCACTGCAGCTCTAATTTCTATGTGAAGATGGGTCTCATAGaaccaaggtttttttttttgtaaatactgATTAACTGTTGCAATGCAAGTGTGCAAATGTTATGTGCTGGATGTGTTTGAACATTTTATTGTCACTGTAACAATACTGTTTATATTTTCTAGACTTtttcaaataaattattaatatgTAAGTATTTGTCACGCTGCTGAAATCTTGAAACCGCatttgtttgatgtgttttcttCAAATCTGAGACAAAAGCGGATTCGAGTTTTGGTGCTGAAAACCGAGAACGGTACAAAATCCATTGTCTTTTATCTTGAAATCCCTCTGTATTTGGCTTGTCTT

Function

NR:

description
Carbohydrate sulfotransferase 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039807387.1 True 2403 mRNA 0.50 3 27190915 27198012
XM_039807388.1 False 2323 mRNA 0.48 3 27190915 27197735
XM_039807389.1 False 2255 mRNA 0.49 3 27190915 27202925

Neighbor

gene id symbol gene type direction distance location
etfbkmt etfbkmt coding downstream 47604 27135856 ~ 27143311 (-)
washc4 kiaa1033 coding downstream 113082 27061216 ~ 27077833 (-)
lrrc10 lrrc10 coding downstream 140088 27049172 ~ 27050827 (-)
fnbp4 fnbp4 coding downstream 147042 27034049 ~ 27043873 (-)
agbl2 agbl2,LOC103361125 coding downstream 157316 27018697 ~ 27033599 (-)
cry1b LOC103363998,LOC102799801,LOC100703716 coding upstream 26901 27229826 ~ 27240938 (-)
uri1 NA coding upstream 452539 27655464 ~ 27669472 (-)
LOC120564488 LOC101485419,LOC102777949,LOC104949269,LOC102291458,LOC100702099 coding upstream 470673 27673598 ~ 27675858 (-)
ccdc113 NA coding upstream 583747 27786672 ~ 27790974 (-)
tbxas1 tbxas1 coding upstream 596081 27799006 ~ 27811080 (-)
G88305 NA non-coding downstream 20648 27169988 ~ 27170267 (-)
G88274 NA non-coding downstream 129779 27060552 ~ 27061136 (-)
G88272 cnot2,LOC104938479 non-coding downstream 133983 27055670 ~ 27056932 (-)
G88245 NA non-coding downstream 186730 27002954 ~ 27004185 (-)
LOC120563588 slc15a5 non-coding downstream 189457 27000941 ~ 27001458 (-)
G88380 panx2 non-coding upstream 154154 27357079 ~ 27358179 (-)
G88381 panx2 non-coding upstream 156871 27359796 ~ 27362901 (-)
G88391 selenoo non-coding upstream 173934 27376859 ~ 27378018 (-)
G88405 NA non-coding upstream 217512 27420437 ~ 27424635 (-)
G88467 NA non-coding upstream 496695 27699620 ~ 27699935 (-)
G88249 mthfs other downstream 176504 27013237 ~ 27014411 (-)
ptprjb.1 NA other downstream 498671 26653636 ~ 26692244 (-)
phrf1 NA other downstream 1543915 25630776 ~ 25647000 (-)
G87897 NA other downstream 1594154 25596353 ~ 25596761 (-)
G87803 NA other downstream 2125427 25064752 ~ 25065488 (-)
zgc:153031 LOC100703984,LOC102237950,LOC106523206,LOC105917737 other upstream 21037 27223962 ~ 27229372 (-)
G88379 panx2 other upstream 152047 27354972 ~ 27355776 (-)
LOC120564276 LOC103371718,LOC104949276,LOC102797857,LOC100696892 other upstream 421065 27623990 ~ 27650062 (-)
LOC120564781 NA other upstream 609320 27812245 ~ 27824961 (-)
tspan9a tspan9,LOC103365760,LOC106534164,LOC101481610,LOC108237543 other upstream 936361 28139286 ~ 28382715 (-)

Expression


Co-expression Network