LOC120563354 (LOC104941983,LOC103374494)


Basic Information

Item Value
gene id LOC120563354
gene name LOC104941983,LOC103374494
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 13002120 ~ 13014975 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039807480.1
TCCAATTCACTTTATTACTTGCCATGGCAGAGGAAAGGGACCAGACTGGAGCCTCCTGGGGGGACCTGCCACAACCTGATGAATATCCTGAACCACATCTGGAGGACGGAGCTGTGCTGAATGGAGAGGCGAAGGAGAAACCCACCAAACATGAGCCAGTAAAATGCAAGCTCAACCTACTGCAGATGCTAAAGGCCACAGAGAGCTGGAGCCCACCTCAGAGTCGGGACAGATATGGGGCAGAGAAGTCTGAGGTTGGAACAGGAGAGTTGGTGCCTGAAGCTCTGAAGACGGGCATGCAAATACAGTTCACTGAACAGAAGCCAAAATTCAACAAACATTCTGCCAACACCAGTTGTCGCTCTCCGGCTGGTTCCATCTCACAGTCTATAGATAGCTACAGTTCAGTGTGCAGTGAAAGCGAGGATGAGTCCTCTCCCAGAGACAAGCCTCAGAAGACCTCCAAAGGCCTTTCTGACTTCTGcatcaaaaacataaaacaggCTGAATTTGGACGCAGAGAAATAGAAGCCGCACAGCAAGAAATGCCAGCACTGATGGTCCTGAGGAAAAGAGCATGTGGGGAGAAACCTCTTGCTGGTGCCAAAGTGATGGGCTGCACACACGTCACTTCACAGACAGCGGTGTTGATTGAGACTCTGTCTGTGTTGGGGGCTCAGTGTCGCTGGGCGGCCTGTAACATCTTCTCCACTCAGAACACTGTGGCTGCTGCTCTGGCTGAAAGAGGCACTTCAGTGTTTGCGTGGAGAGGAGAATCAGAGGAAGACTTCTGGTGGTGTATTGACCGATGTGTCGGTGCTGAGACCTGGCAGCCCAACATGATTCTGGATGATGGAGGGGACCTGACCCACTGGATCTATAAGAAGCACCCAGACCTGTTCAAGAAGATCATAGGCATCGTGGAGGAAAGTGTGACAGGCATCTATCGGTTATACCAGCTATCAAAGGCAGGCAAGCTGTGTGTCCCAGCCATGAACGTTAACGACTCGGTGACCAAGCAGAAATTTGAAAACCTTTACTGCTGCAAGGAGTCCATACTGGATGGGTTGAAGAGAACCACTGACATCATGTTTGGAGGAAAACAGGTGGTGGTGTGCGGCTATGGGGAGGTTGGCAAAGGTTGCTGTGCTGCCCTGAAAGCATTGAGTGCTGTCGTATATGTCACAGAAGTGGATCCCATTTGTGCCGTTCAGGCCTGCATGGATGGCTTCAGAGTGATTCAGTTGAGGGAAGTGGTCAGACAGGCAGACATGGTCATCACCTGCACAGgCAATAAAAACGTGGTAGAGAGGGAACATCTGGACAGAATGAAGAGCGGCTGCATCGTCTGCAACATGGGACACTGCAGCACCGAGATTGATTTGTTGAGTCTGCGGACTGCAGAGCTGAGGTGGGAGCGTGTGAAGCCTAAGGTGGACCATGTTATCTGGCCTGACGGCAAGAGAATCGTCCTGTTGGCCGAGgGCCGTTTGTTAAATCTGAGCTGCTCCACGGTGCCCTTATTTGTCATCTCCGTCACCGCAACAACTCAGGCTCTGGCTCTCATAGAGCTGTACAGTGCTCCAGAAGGACGTTACAAACAGGACGTCTACCTGCTGCCAAAGAAGATGGATGAATATGTGGCCAGTCTTCACCTGCAGACATTTGACGCTCACCTCACAGAGCTGACTGATGAACAGACCAAGTACCTGGGCATCAGCAAACACGGACCCTTCAAATCCAACTACTACAAgTATTAATCCTCTGGACATAAAGCCGAAGCAGAAGTTCTTCAGATGTTCTTTTGTGGATTTGATGTTGAAAATAACCCCCACAGTCCTACAGACAGAGCACTGTCGCCCTCTACAGTCTCAATCGTACCCACACTCAATATTGTTTAGAGACAGTGGACTTTTACTCGTTCACtgatttttttgtgtacttACGTGTATCTGTTTTATGTGTTACACTTTTCCTggttataatataaatatatgttcaCAGTAACCAGAATGTAATCACAGTAAATTCTTAATTGAAACTAAAAGAGTATAAAATCAAGAGAAACCCAAAATGTTGAATGGGAGTTATTTATTCTTCTGCTTGAAATAATAACAACACCATTTATAAATTGGAGCAGCAATCAGTAAAGTATATTTAACCGACCACATATAACGACTGTTAACAGTTCACACCTTATGTGATCAACAGTCTTTGTCAACTGAATATCTGCTGATTATCAGTGAGGGAACACATTTAAATAGTTTCATGTCTCGTGCCCTATACTCCTGATTTATATCTAACATTACCACATTTACCTTAACTTCATGAAAGGAATGCTAAAAGTTGACATATTTTCATTGGCTTAATGCTCTCAAAGATAATTGTAGTTAAGCACGCATAAGATATCTTAATAACAAGAACAGATTTCCCTGCTTCTCTGTCTCACAAAAATTAGTTAACTTAACGTTTTCTTGTTGACGTTAGAACAGCATgaacagtattttattttgtttaatgtCTATGCTCACATCTGTGCTCATACAACCCCCATACATACAAGGTGTccctatatattttttattaaactctAAATTGCAATCAAAAAACAATGACTGATGGTAATGCTAATAAGCTCGACCTGCAGGTTGGAAGCAGCTCACTCAGCAGCTCTACAAAGACTGCACAGCCTCATAAGTGACTGTTGCCCCACTAGAGGGCGGAAGAGCACTGTTGTCTTTGGGTGATACTCACCATGAGTATAATTGCTtatatttctgtcattttaaggCTTCGGTATTTATcctgttaaaaatatttagcACCGGCATACTTTTGTACGTAGCAAGAAAGACCATTCTCAAGTTCTGGATATCTAAGAACACCCCCTACACTGGACGATTGGTATAGGGAAGTCTTGGAAATACTcccattggaaaaagtgactcATACCCTGCATGACAATTTCGAGGGATTCATCAAGATATGGCAACCAGTTCTGGCCATGGTGGACCCCTCTGGACTGAACTTTGTCTCACCCAACTAACAACATAGGATCTGACTACAGCCTGTTCTAGCAATTTGAATATAACTAGGCCTGCAcggtggtgtgtgtctgtcttttcattattttttaggttattttatcattattttaggGGTATGTCtcactttgtctttttttttttttcatggaaaATGTGGTTCTATACATAACTGGAACGGAAATGTGTATATTGAATACCAGAA
>XM_039807481.1
TCCAATTCACTTTATTACTTGCCATGGCAGAGGAAAGGGACCAGACTGGAGCCTCCTGGGGGGACCTGCCACAACCTGATGAATATCCTGAACCACATCTGGAGGACGGAGCTGTGCTGAATGGAGAGGCGAAGGAGAAACCCACCAAACATGAGCCAGTAAAATGCAAGCTCAACCTACTGCAGATGCTAAAGGCCACAGAGAGCTGGAGCCCACCTCAGAGTCGGGACAGATATGGGGCAGAGAAGTCTGAGGTTGGAACAGGAGAGTTGGTGCCTGAAGCTCTGAAGACGGGCATGCAAATACAGTTCACTGAACAGAAGCCAAAATTCAACAAACATTCTGCCAACACCAGTTGTCGCTCTCCGGCTGGTTCCATCTCACAGTCTATAGATAGCTACAGTTCAGTGTGCAGTGAAAGCGAGGATGAGTCCTCTCCCAGAGACAAGCCTCAGAAGACCTCCAAAGGCCTTTCTGACTTCTGcatcaaaaacataaaacaggCTGAATTTGGACGCAGAGAAATAGAAGCCGCACAGCAAGAAATGCCAGCACTGATGGTCCTGAGGAAAAGAGCATGTGGGGAGAAACCTCTTGCTGGTGCCAAAGTGATGGGCTGCACACACGTCACTTCACAGACAGCGGTGTTGATTGAGACTCTGTCTGTGTTGGGGGCTCAGTGTCGCTGGGCGGCCTGTAACATCTTCTCCACTCAGAACACTGTGGCTGCTGCTCTGGCTGAAAGAGGCACTTCAGTGTTTGCGTGGAGAGGAGAATCAGAGGAAGACTTCTGGTGGTGTATTGACCGATGTGTCGGTGCTGAGACCTGGCAGCCCAACATGATTCTGGATGATGGAGGGGACCTGACCCACTGGATCTATAAGAAGCACCCAGACCTGTTCAAGAAGATCATAGGCATCGTGGAGGAAAGTGTGACAGGCATCTATCGGTTATACCAGCTATCAAAGGCAGGCAAGCTGTGTGTCCCAGCCATGAACGTTAACGACTCGGTGACCAAGCAGAAATTTGAAAACCTTTACTGCTGCAAGGAGTCCATACTGGATGGGTTGAAGAGAACCACTGACATCATGTTTGGAGGAAAACAGGTGGTGGTGTGCGGCTATGGGGAGGTTGGCAAAGGTTGCTGTGCTGCCCTGAAAGCATTGAGTGCTGTCGTATATGTCACAGAAGTGGATCCCATTTGTGCCGTTCAGGCCTGCATGGATGGCTTCAGAGTGATTCAGTTGAGGGAAGTGGTCAGACAGGCAGACATGGTCATCACCTGCACAGgCAATAAAAACGTGGTAGAGAGGGAACATCTGGACAGAATGAAGAGCGGCTGCATCGTCTGCAACATGGGACACTGCAGCACCGAGATTGATTTGTTGAGTCTGCGGACTGCAGAGCTGAGGTGGGAGCGTGTGAAGCCTAAGGTGGACCATGTTATCTGGCCTGACGGCAAGAGAATCGTCCTGTTGGCCGAGgGCCGTTTGTTAAATCTGAGCTGCTCCACGGTGCCCTTATTTGTCATCTCCGTCACCGCAACAACTCAGGCTCTGGCTCTCATAGAGCTGTACAGTGCTCCAGAAGGACGTTACAAACAGGACGTCTACCTGCTGCCAAAGAAGATGGATGAATATGTGGCCAGTCTTCACCTGCAGACATTTGACGCTCACCTCACAGAGCTGACTGATGAACAGACCAAGTACCTGGGCATCAGCAAACACGGACCCTTCAAATCCAACTACTACAAGTGA
>XM_039807482.1
AGTGTGAGAGCAGCTCTGGCAGCATGAAGAAAGTATATAGTCTAGTGAACACAACTAAAGCTAAGGACCAGGAGGCAGTGCAGTCCATCTGCATCAAGCAAATACAGTTCACTGAACAGAAGCCAAAATTCAACAAACATTCTGCCAACACCAGTTGTCGCTCTCCGGCTGGTTCCATCTCACAGTCTATAGATAGCTACAGTTCAGTGTGCAGTGAAAGCGAGGATGAGTCCTCTCCCAGAGACAAGCCTCAGAAGACCTCCAAAGGCCTTTCTGACTTCTGcatcaaaaacataaaacaggCTGAATTTGGACGCAGAGAAATAGAAGCCGCACAGCAAGAAATGCCAGCACTGATGGTCCTGAGGAAAAGAGCATGTGGGGAGAAACCTCTTGCTGGTGCCAAAGTGATGGGCTGCACACACGTCACTTCACAGACAGCGGTGTTGATTGAGACTCTGTCTGTGTTGGGGGCTCAGTGTCGCTGGGCGGCCTGTAACATCTTCTCCACTCAGAACACTGTGGCTGCTGCTCTGGCTGAAAGAGGCACTTCAGTGTTTGCGTGGAGAGGAGAATCAGAGGAAGACTTCTGGTGGTGTATTGACCGATGTGTCGGTGCTGAGACCTGGCAGCCCAACATGATTCTGGATGATGGAGGGGACCTGACCCACTGGATCTATAAGAAGCACCCAGACCTGTTCAAGAAGATCATAGGCATCGTGGAGGAAAGTGTGACAGGCATCTATCGGTTATACCAGCTATCAAAGGCAGGCAAGCTGTGTGTCCCAGCCATGAACGTTAACGACTCGGTGACCAAGCAGAAATTTGAAAACCTTTACTGCTGCAAGGAGTCCATACTGGATGGGTTGAAGAGAACCACTGACATCATGTTTGGAGGAAAACAGGTGGTGGTGTGCGGCTATGGGGAGGTTGGCAAAGGTTGCTGTGCTGCCCTGAAAGCATTGAGTGCTGTCGTATATGTCACAGAAGTGGATCCCATTTGTGCCGTTCAGGCCTGCATGGATGGCTTCAGAGTGATTCAGTTGAGGGAAGTGGTCAGACAGGCAGACATGGTCATCACCTGCACAGgCAATAAAAACGTGGTAGAGAGGGAACATCTGGACAGAATGAAGAGCGGCTGCATCGTCTGCAACATGGGACACTGCAGCACCGAGATTGATTTGTTGAGTCTGCGGACTGCAGAGCTGAGGTGGGAGCGTGTGAAGCCTAAGGTGGACCATGTTATCTGGCCTGACGGCAAGAGAATCGTCCTGTTGGCCGAGgGCCGTTTGTTAAATCTGAGCTGCTCCACGGTGCCCTTATTTGTCATCTCCGTCACCGCAACAACTCAGGCTCTGGCTCTCATAGAGCTGTACAGTGCTCCAGAAGGACGTTACAAACAGGACGTCTACCTGCTGCCAAAGAAGATGGATGAATATGTGGCCAGTCTTCACCTGCAGACATTTGACGCTCACCTCACAGAGCTGACTGATGAACAGACCAAGTACCTGGGCATCAGCAAACACGGACCCTTCAAATCCAACTACTACAAgTATTAATCCTCTGGACATAAAGCCGAAGCAGAAGTTCTTCAGATGTTCTTTTGTGGATTTGATGTTGAAAATAACCCCCACAGTCCTACAGACAGAGCACTGTCGCCCTCTACAGTCTCAATCGTACCCACACTCAATATTGTTTAGAGACAGTGGACTTTTACTCGTTCACtgatttttttgtgtacttACGTGTATCTGTTTTATGTGTTACACTTTTCCTggttataatataaatatatgttcaCAGTAACCAGAATGTAATCACAGTAAATTCTTAATTGAAACTAAAAGAGTATAAAATCAAGAGAAACCCAAAATGTTGAATGGGAGTTATTTATTCTTCTGCTTGAAATAATAACAACACCATTTATAAATTGGAGCAGCAATCAGTAAAGTATATTTAACCGACCACATATAACGACTGTTAACAGTTCACACCTTATGTGATCAACAGTCTTTGTCAACTGAATATCTGCTGATTATCAGTGAGGGAACACATTTAAATAGTTTCATGTCTCGTGCCCTATACTCCTGATTTATATCTAACATTACCACATTTACCTTAACTTCATGAAAGGAATGCTAAAAGTTGACATATTTTCATTGGCTTAATGCTCTCAAAGATAATTGTAGTTAAGCACGCATAAGATATCTTAATAACAAGAACAGATTTCCCTGCTTCTCTGTCTCACAAAAATTAGTTAACTTAACGTTTTCTTGTTGACGTTAGAACAGCATgaacagtattttattttgtttaatgtCTATGCTCACATCTGTGCTCATACAACCCCCATACATACAAGGTGTccctatatattttttattaaactctAAATTGCAATCAAAAAACAATGACTGATGGTAATGCTAATAAGCTCGACCTGCAGGTTGGAAGCAGCTCACTCAGCAGCTCTACAAAGACTGCACAGCCTCATAAGTGACTGTTGCCCCACTAGAGGGCGGAAGAGCACTGTTGTCTTTGGGTGATACTCACCATGAGTATAATTGCTtatatttctgtcattttaaggCTTCGGTATTTATcctgttaaaaatatttagcACCGGCATACTTTTGTACGTAGCAAGAAAGACCATTCTCAAGTTCTGGATATCTAAGAACACCCCCTACACTGGACGATTGGTATAGGGAAGTCTTGGAAATACTcccattggaaaaagtgactcATACCCTGCATGACAATTTCGAGGGATTCATCAAGATATGGCAACCAGTTCTGGCCATGGTGGACCCCTCTGGACTGAACTTTGTCTCACCCAACTAACAACATAGGATCTGACTACAGCCTGTTCTAGCAATTTGAATATAACTAGGCCTGCAcggtggtgtgtgtctgtcttttcattattttttaggttattttatcattattttaggGGTATGTCtcactttgtctttttttttttttcatggaaaATGTGGTTCTATACATAACTGGAACGGAAATGTGTATATTGAATACCAGAA
>XM_039807483.1
AGTGTGAGAGCAGCTCTGGCAGCATGAAGAAAGTATATAGTCTAGTGAACACAACTAAAGCTAAGGACCAGGAGGCAGTGCAGTCCATCTGCATCAAGCAAATACAGTTCACTGAACAGAAGCCAAAATTCAACAAACATTCTGCCAACACCAGTTGTCGCTCTCCGGCTGGTTCCATCTCACAGTCTATAGATAGCTACAGTTCAGTGTGCAGTGAAAGCGAGGATGAGTCCTCTCCCAGAGACAAGCCTCAGAAGACCTCCAAAGGCCTTTCTGACTTCTGcatcaaaaacataaaacaggCTGAATTTGGACGCAGAGAAATAGAAGCCGCACAGCAAGAAATGCCAGCACTGATGGTCCTGAGGAAAAGAGCATGTGGGGAGAAACCTCTTGCTGGTGCCAAAGTGATGGGCTGCACACACGTCACTTCACAGACAGCGGTGTTGATTGAGACTCTGTCTGTGTTGGGGGCTCAGTGTCGCTGGGCGGCCTGTAACATCTTCTCCACTCAGAACACTGTGGCTGCTGCTCTGGCTGAAAGAGGCACTTCAGTGTTTGCGTGGAGAGGAGAATCAGAGGAAGACTTCTGGTGGTGTATTGACCGATGTGTCGGTGCTGAGACCTGGCAGCCCAACATGATTCTGGATGATGGAGGGGACCTGACCCACTGGATCTATAAGAAGCACCCAGACCTGTTCAAGAAGATCATAGGCATCGTGGAGGAAAGTGTGACAGGCATCTATCGGTTATACCAGCTATCAAAGGCAGGCAAGCTGTGTGTCCCAGCCATGAACGTTAACGACTCGGTGACCAAGCAGAAATTTGAAAACCTTTACTGCTGCAAGGAGTCCATACTGGATGGGTTGAAGAGAACCACTGACATCATGTTTGGAGGAAAACAGGTGGTGGTGTGCGGCTATGGGGAGGTTGGCAAAGGTTGCTGTGCTGCCCTGAAAGCATTGAGTGCTGTCGTATATGTCACAGAAGTGGATCCCATTTGTGCCGTTCAGGCCTGCATGGATGGCTTCAGAGTGATTCAGTTGAGGGAAGTGGTCAGACAGGCAGACATGGTCATCACCTGCACAGgCAATAAAAACGTGGTAGAGAGGGAACATCTGGACAGAATGAAGAGCGGCTGCATCGTCTGCAACATGGGACACTGCAGCACCGAGATTGATTTGTTGAGTCTGCGGACTGCAGAGCTGAGGTGGGAGCGTGTGAAGCCTAAGGTGGACCATGTTATCTGGCCTGACGGCAAGAGAATCGTCCTGTTGGCCGAGgGCCGTTTGTTAAATCTGAGCTGCTCCACGGTGCCCTTATTTGTCATCTCCGTCACCGCAACAACTCAGGCTCTGGCTCTCATAGAGCTGTACAGTGCTCCAGAAGGACGTTACAAACAGGACGTCTACCTGCTGCCAAAGAAGATGGATGAATATGTGGCCAGTCTTCACCTGCAGACATTTGACGCTCACCTCACAGAGCTGACTGATGAACAGACCAAGTACCTGGGCATCAGCAAACACGGACCCTTCAAATCCAACTACTACAAGTGA

Function

NR:

description
PREDICTED: putative adenosylhomocysteinase 3 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039807480.1 True 3249 mRNA 0.45 17 13002120 13014975
XM_039807481.1 False 1757 mRNA 0.51 16 13003698 13014975
XM_039807482.1 False 3048 mRNA 0.44 17 13002120 13013503
XM_039807483.1 False 1556 mRNA 0.51 16 13003698 13013503

Neighbor

gene id symbol gene type direction distance location
LOC120564144 LOC103374492 coding downstream 27711 12965964 ~ 12974409 (-)
LOC120564143 NA coding downstream 57884 12940996 ~ 12944236 (-)
si:dkey-103i16.6 LOC103374744,LOC101471570 coding downstream 70908 12914638 ~ 12931212 (-)
slc17a8 slc17a8 coding downstream 227865 12760632 ~ 12774255 (-)
nr1h4 nr1h4 coding downstream 243329 12742142 ~ 12758791 (-)
LOC120564327 LOC104941984,LOC100534567,LOC102302869 coding upstream 1590 13016565 ~ 13026368 (-)
LOC120563727 LOC104940840,LOC103375251,LOC104940445 coding upstream 132872 13147847 ~ 13152704 (-)
kxd1 kxd1 coding upstream 140436 13155411 ~ 13158096 (-)
sinhcaf fam60a,LOC107388928,LOC103376222,LOC104940447 coding upstream 144338 13159313 ~ 13166108 (-)
LOC120564344 LOC104940834,LOC103371551 coding upstream 152343 13167318 ~ 13187582 (-)
G84376 NA non-coding downstream 18060 12972389 ~ 12984060 (-)
G84370 NA non-coding downstream 53197 12948661 ~ 12948923 (-)
G84369 NA non-coding downstream 53511 12948274 ~ 12948609 (-)
G84350 NA non-coding downstream 62703 12938044 ~ 12939417 (-)
G84338 NA non-coding downstream 92174 12908967 ~ 12909946 (-)
G84446 NA non-coding upstream 178294 13193269 ~ 13193706 (-)
LOC120563976 NA non-coding upstream 185968 13200943 ~ 13201663 (-)
G84532 NA non-coding upstream 220198 13235173 ~ 13235410 (-)
G84533 NA non-coding upstream 221676 13236651 ~ 13236861 (-)
G84528 NA non-coding upstream 256277 13271252 ~ 13272529 (-)
G84123 cat,LOC102293651,LOC102204975,LOC102775586,LOC102293936 other downstream 857574 12141523 ~ 12144546 (-)
G84083 NA other downstream 1113722 11888027 ~ 11888398 (-)
ptpn9a ptpn9 other downstream 1741159 11173553 ~ 11260961 (-)
oaz2a oaz2,LOC104929548,LOC101470759,LOC102200097,LOC106531198 other downstream 2088903 10823286 ~ 10913217 (-)
LOC120564603 NA other downstream 2287275 10706219 ~ 10714845 (-)
G84530 LOC100696427,LOC106963151,LOC107104182,LOC107388919,LOC104956556,LOC102796452,LOC102202152 other upstream 215642 13230617 ~ 13231095 (-)
prr5a prr5,LOC103371545 other upstream 231853 13246828 ~ 13256093 (-)
LOC120564547 fbxl14,LOC103380143,LOC107388938 other upstream 310998 13325973 ~ 13385205 (-)
mafb maf,LOC104941368,LOC104940469,LOC101071510,LOC101484138,LOC103380135,LOC102219741,LOC106520304 other upstream 558856 13573831 ~ 13618786 (-)
zgc:77752 NA other upstream 1016129 14031104 ~ 14037716 (-)

Expression


Co-expression Network