LOC120563465 (adamts20)


Basic Information

Item Value
gene id LOC120563465
gene name adamts20
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 21874973 ~ 21961067 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039807628.1
GGGTACTGGGCAATGATCCCTCCTTTCAGTATAGACTGCAGTTTACATTAGGCAGCAACATTTTAGTTTTGTCAGGGggatgaacgtgtcataaataGTTAGGTTTTATAGAGGGTGTAGTGGATGCACGTTTAGCAATGCGATGAGGCCAATGCACTTTGCAAGACTTGCGCTGCAGAGAGCCTCCGCGGATCCCACGACCTGTTGCTGACAAGCCGGgggaaaaggagagggagagggggagccgctcgggagagacagagggtaCTGCCTTGGAGACTACAGCCTTGGGATCTTCGCGGAGGGAATCATGCAGTTTGCAATCTGGCTGCTTGGACTAATGTGTCATCTGTCAGCGCTTGTCCGGGACACTTTGCAACACCGATTGCATCCGAAACAAGAAAGCTTCATCAAGCAGCTGTCATCGTATGAAATCATCACCCCGCTCCGTGTGAATGACTTTGGAGAGTCATTCCCCCACAAATTGCACTACAGAAGGAGACGGAGGAGTTTAAATGATGACCTGTCGGGATTACGGGTTTGCTACAGGATCGATGCATTCGGGGAACGCTTTCATCTCAATCTGACCGCAGACTCCGGCTTCATCGCCCCATCTTACAGGGTGACACACTTGGGAGCGGAAGAGAGCAACGCCACGGACAGACACTTGGTTGACCCGAGCGATATGCGCCACTGCTTTTTCCGCGGACAAGTCAACGCCAAGAGCGAGTACCCGGCCGTCTTCAGTCTGTGCACCGGCCTTATTGGAACATTTACGACACAACATGGTGAATACTTCTTGGAGCCTCTTTTAAATGCTGCGGGGGAGGAATTTGATGAAGAGCACATCAAACCTCATCTCGTCTATCGACATGAGAGGAAGAAGAACATTTCGCATactgacaaaaacacagagcCCTGTGCTGCCTCAGAGAATTCCAAGAGGCCAGTTGCTTTTGAGAGCAGTGGGGGTATGGGAGAGGAGCTGGACTCTCTCAGAGCCACCATAGATGATCAACACATTTATGACAACAACTCCACCAGCACGCACCACACATCCCCACACAGACGCAAGCGCTTCCTCTCCTACCCTCGCTACGTTGAGCTGATGGTGACAGCGGATGCCAAAATGGTGCGTCACCATGGACGCAACCTAGAGCACTACATCCTAACAATCATGTCAGTAGTAGCAGCAGTGTACAGGGACCCCAGCGTAGGAAACCTTATCAACATCGTGATTGTCAAGCTAGTCGTCGTCCACAATGAACAGGAAGGGCCCACTGTAAGCTTCAATGCTGCCACGACTCTCCACAACTTCTGCGTCTGGCAGCAGAGCCAAAACGTCCAGGATGACAGCCATCCCACTCACCATGACACAGCACTCCTCATTACCAGGGAAGACATCTGCCGTGCAAAAGATAAATGCGACACGTTAGGGCTTGCGGAGCTGGGGACCATGTGCGACCCGTACCGAAGCTGCTCCATCAGTGAGGAAAATGGAATTAGTGCCTCCTTCACCATCGCTCATGAGCTGGGCCATGTGTTCAACATGCCTCACGATGACAACCCAAAGTGTCGGGAGGCAGGCATGAAGCACCAGTATCATGTCATGGCTCCCACCCTCAACTATGACACCAATCCCTGGTCGTGGTCCAAGTGCAGCCGCAAGTACATCACAGAGTTTCTAGACACCGGCTATGGGGAGTGCCTCCTTGATGAGCCTGTAGGCAGGACATACGAGTTGCCCACCCTCCTTCCTGGTCAAATCTACAATGCCAACAGGCAGTGTGAACTGATGTTTGGACCCGGCTCCCAAATTTGCCCTTACATGAAACAGTGCAAGAGGCTGTGGTGTACCAGTGCAGAGGGGGACCATAAAGGATGTCGCACACAGCACATGCCATTGGCTGATGGAACTGACTGTGGACATGGAATGTACTGCAGACACGGGATGTGTGTAAACAAGGAGTTGGACCTGCAGTCAGTCCATGGGGAGTGGGGTCCCTGGGGGCCCTACAGTGTTTGCTCCAGGTCCTGTGGTGGAGGAACTCGGAGCACTGCCAGAGACTGCAACAAGCCTGAGCCCAGAAATGGCGGCAAGTTCTGTGTGGGTCGCAGGATGAAGTTCCGCTCTTGCAACACTGAGCCATGTCCGCGAGGACGGAAAGATTTCCGCGAAGAGCAGTGCTCTCAGTTTGACGGCAAGCACTTCAACATCAACGGTCTACCTCCCACCGTCCGCTGGGTCCCCAAGTACAGTGGCATACTAATGAAGGATCGCTGTAAGCTCTTCTGCCGGGTTGCTGGGACTACGGCATACTATCAGCTCAAGGACCGCGTCATCGACGGCACGCCGTGTGGGCCAGATACTTACGACATCTGTGTTCAAGGCCTCTGCAGGCAAGCAGGCTGCGACCACGTTCTCAACTCAAAGGCCAGGAATGACAAGTGCGGAGTGTGTGGCGGGGACAACTCGTCGTGTAAAACCCTGGCAGGGACCTTCAACGATGCTCAGTATGGTTACAACACAGTGGTGAGGATTCCAGCTGGAGCCACCAACATTGATATCAAACAGGTCAGCTACTCTGGAAAGCCAGAGGACGACAACTACCTCGCATTATCTGACAGCCAGTCCAACTCCCTTCTGAATGGGAACTTTGTGGTGGCCATGTTCAAAAGGGAAATCACCTTCAAGGGAACTGTTATTGACTACAGCGGCTCAGACACAAAAGTGGAGCGCATCAACTGCACTGACCGCATCGAGGAGGAGCTCATTCTGCAGGTCTTGTGTGTGGGAAACCTCTACAACCCAGATGTCCGTTACTCCTTCAACATACCCATCGAGCAACACAGGGAGCAGTTTGTGTGGGATCCCTCAGGCTCCTGGCTCGAGTGCAACCGCATCTGTCAGGGTGAGCGAAGGCGCaaggtggtgtgtgtgcgtaagAGTGATCACCTTGAGGTATCGGACCAACGCTGTGAACATTTACCTCGTCCTGTTTCTGTTGCTGAGCCCTGCAACACTGACTGTGAAGTCAGGTGGCATGTTGCTGGAAAGAGCGAATGTTCTGCTAAATGTGGCCCAGGCTACCGCAGCCTGGATATTCAATGTATGAAGTACAGCCTGACGAAGAGACAGAGTGGGAGGATGGAGGCCAACGCCTGTGGAGATGCCGCCAAACCTCAGACCAGAGAGCCCTGTCATGGGGATTGTCTGCTTAAGAGCTGGCAGTACAGCGCCTGGTCACAGTGCTCTAAGACATGTGGACGTGGGAGCCGGAGCAGAGAGTCTTACTGTATGAACAACCTGGGTAGACGGCTGGTGGACCGGGAGTGCAACGAATACCAGAGGGTGGTCACTGAAACCTGCAGCGACCAGCCATGTCCGAAGTGGACTGTTAGCGAGTGGAGTGAGTGCCTGGTAACTTGTGGGAAGGGGATGAGGCACAGACAAGTGTCCTGCAACGTGGGAGCTGGGGAGGAAAAGCTGAGCGAGCACTTCTGCGACCCGTCCAGCAAACCGCCTGCTGTGGGGAGCTGTGAGCTGCCTGAGTGTGCATCCTGGCAGGTCGGCGTATGGGGAGCGTGTGCAGTGACCTGTGGCCATGGTTACCAGATGAGAGCTGTTAGGTGTGTGTCGGGGAACTACGGTGACACAGTAGACGATAGAGAGTGCAATGCTGCAGCGAGGCCTAGAGACAGTCAggACTGTGAGATGCCGGCGTGTCCCTGGGCTTCTCCGGTACAAAGCACACCTCGTCCTGACAACTCCGCTCAGCTCCTGACTCAGTGGAGATATGGCTCCTGGACTGCTTGCTCGGTGTCCTGTGGCAAGGGGAAGCGGGCGCGTTATGTCAGCTGCAGAGATGCCCAGGGAGGGGTTGCTGACGAGTCACACTGCGCCCTTCTGCCCCGGCCCCCCGAGTCCTCCGCCTGCTTCAGCCCCTGTGGCCAATGGCGTGCCGGGGAGTGGTCTCCTTGTTCAGTAACTTGTGGCGTTGGAAGAACCACCAGGCAGGTGGTCTGCTCTAACTACCACCAGCCAGTGGACCAGTCTTTCTGCGACCCGGATGAGAAGCCTGCGACAGAACAGGAGTGTACCGCTGCACCCTGCTCTTCTATCTACCACCGTCAGCGTATCAATGATCAGCCCTACGAACATCCCCAGGACCCAGGACGCCATCCTGGGCACAGCAGCTGGAATGTGCCCTCAGCAGACAACCAGTGGAGGACCGGACCCTGGGGCGCATGTTCCAGTACCTGTGCCGGAGGCTTCCAGAGGCGAGTGGTGGTCTGTCAGGATGCTGATGGACGCAGCAACAGCTACTGCGATGAGAGGGTCAAACCTGCCGAGTCCAAGAGCTGCGACTCTGGGCCCTGTCCTCTGTGGAACTACGGTGTCTGGGGAGAGTGTACCCAGACCTGCGGTGGAGGAAGGAGGACTCGCCTGGTGGTTTGTCAAAGGCCTAACGGCCAGAGGCTAAACGACTACAACTGCGACATCCTGGACAAGCCGCCCGACATGGAGCAATGCAACCTGCAGCCCTGCCCAGGCTCTGCCACCTGGCACCGCCGACCATGGAAGCCGTGTTCGGTGAGTTGTGGTCGGGGGACCAAGCAGCGGGAGATAGCCTGTGTTTATCAGAACAAAACCAAAATAGAGGAGGAACACTGCGGTCATCTGCCCCGGCCGCGGATGCAGAAGGCCTGTCGGGTGCGGGGATGCCCCAGTTGGAAGGCCAACAAGTGGAGGGAGTGTTCTGTCACCTGTGGAGTCGGAGTTCAGAACCGAGATGTTTACTGCAGACTAAAAGGCAGCGGACGGGTCAGAGAGGATCTATGTGATGCTCACCAGCGTCCTGCCATTGTCCAGCCATGCCAAACTGCAGAATGCACACATTACACTTGGGTCGCTGGTGAATGGGAAGAATGTAATGCAACCTGTGGAGAAGGCGTAAGAAGCAGGAAGGTGAGGTGCATGGACCCAGGAATGACACCCGTCCAGGATGATTACTGTGAGGCACCGTTCCAGCCACTATCACACCAGCCGTGCAAAGTATCTCCCTGCCACTTTATGTGGATTACAGGGGAATGGTCACAGTGCTCTGCCAGCTGCGATGTGGGCTACCAGCAGCGTATAGTCTCCTGCTCCATGATGCCCTCCTCTCAGGCTCTGCGCCCGTATGCTGCTGCCCATTCCTCCCCTGCCAGCACCCACTGCCCTGAGCCCCACCCTCCTGGCTCTCGTCCTTGCCTCCTCAGAGACTGCCCGCACACAACCTACTGGAAAGTTGGCCCATGGAGCAAGTGCTCACAGACCTGCGGGGCAGGAGTGATGGAGCGCAGAGTGGAGTGTGCGACCTCCAAAGGCCAACCGTCCAAACACTGCCGTCCTTCAGAAAGACCTGAGTCTCAAGCTGCATGTCAAGACAGAGAATGCCAGTTGTTTGCTTCCTGCCGAGAGGTCCAGATGAGACTGGGTGTGAAGATAGATGGGGAATACTATCTCAAAGTCAAGTCCCGGATCCTACAGATTTACTGTGCTGAGATGCAGACTGATTTCCCCAAGGAGTATGTGACCTTGCGCAGCGGTCAGACTGACAACTACTCCGAGGTGTATGGGCACAGGTTGCTCAACCCCTTTGAATGTCCGTATAACGGCAGCCGAAGACAGGACTGCGACTGCAGGAACGATTACTCAGCAGCAGGATACACACTCTTCCATAAAGTTCGCCTGGACCTGAGCTCCCTGAGGATAATGATCACAGACCTCCAGTTTTCCCAGACTCTTCTTGGTCGACCTGTGCCCTTTGCTACAGCGGGAGATTGTTATAGTGCAGCCAAGTGTCCACAGGGCCAGTTCAGCATTAATCTGATTGGCACCGGTCTCAAAGTGGCTGAGGCCACCAAGTGGACATCACAGGGCAACTATGTTTCAGTCAAAGTCCACAGATCTGAGGACGGAACAAGAATCTACGGCCGCTGTGGTGGTTTCTGTGGGAAGTGCATTCCCCAGGCTCACAATGGCCTACTCCTTCAAGTCCACTGAGAGCCATGCAGAGACCAAACCCCTAAATCTATCCTGAAGACAGTAACCCAGGAACATGCAATAATAGTGATTTGTTGGACCCCGTTGTCGTCTGTGAGTGTGGTGGAGAAGCATTTAACAGTAATTATCACATCCCCAGTTACCAAATGGCAGCTAAAGCATACAAGACACTATGTACTGTGCAGTACTACAGGGCCACTGTCAGGTCCTTCATCCAAACTGCTATCTCTAAAGAAGACCCAGCTATATTTGCATCCCAACAGTGTTGCAATGGACTTTCAAACACTTCTGTGCTTTGGAACcgaaaatgcttttttttatgacaCTATGTTATGCATTTGTTTTAAGCATCATACAAAGGGATACAAAACTTCAAAACACTGGGAAAGCAACTACACGAGCAGTAGAAAACCTAATACTTCAAGGAAGACATTTTCATCTTTCAAAAACACCTTTTCTTGTGGTCATTCTGTGAAGTGAAGTCTGGTATTTCGTCATGAAGTACCTGGAAGTAATCTTGTTATATGTGACCTTCCACAGTTCATAGATATTTATTATTACAGCTACACTGTAAGAATGTAGTTACCATTTATCTAATTGACTTGCTATCAATGAGACAGTATAAAaatctatatactgtatgtaataatCATTGCACTTCTCGGCTGACAAAGAAGTGCTACAGACAGACATTGAAATAGTATGCAAGGGATGGTTGCATTATTGTTTTACAATGTGACGGCCAATAGGCTGAGATATAAAAAAGAAGAACTACAAaaacactgtatttttttgAGACTACTAAATGAGCTACACTGCAGATCATCTTGGCCTTACACAAGTTTAAAGgaaaagttgacattttggCATTTActcttatttagtttttttgtcaaGAGTTACAGTAGAttagaagatcaataccactcacAGACATAAGCGTGGTATCGATCTTTTCATCTTACTTACATCTTAACACATCTTACAagaaagtgtatttcccaaaatgtcaaactagtAAGTAGAGTAAGCTAGCAACTAACTACTGATGTGACCTGCCTTATATCAGAGGTCAAACTTTAGGAAAGCGTGAAGAGCCTTTAGATTTAAAACAACTTCAGATCATTTACTTTTAATTTCTAAAGTCTGTCTGCTGTCGCCTGTTGTTGGATATTTCACAAAACTACTTAACCTGCAAATACACTCCACAGACatatgactgtcacatgaagaCAGAATAAATACTAGTGCTGTGAGGAAATAGctaaaatatttcaatatttccTAGTGTTTAAGTACGGTATACACATTTTCtgtggcttttgttttttttaaaaccacgAGGATTCTGTTATTTTTAAGttaagtgtttttctttaatcACGCCACACAGACAAGTTCTCATCTGTTACACTGTGACACAGAATCAGGTGTGATGTCTCACCTCACACCCTCCATTGGGCCTACTGTAGGTACCTGCAACCCCTACCTCTCACAAACATCCATGCTCTACTGAGATATGTGTtgtaatatatttatgtttgaccatatttattctgtaatGACTGTAGATATGTTCTATGTTTTAAGGTACAATGACTACTACCAACAGAGAAGCCATTGTCTAATGTTTTGTCCTATTGTATGTGTGCTTTgctaaaaaagaagaaggtatTAGCCTACTACTATTTGTAGTGTGTAACCACTAACCTTAAATGAGGATCTTTTTAAATGGTGCTTTTGAACTACTGGAATTACCTCTGATCTTGAGAAGGAAAACACTGTCTTTTGGCTCTTTGGCAGATGTAGGATCTGCCTATAATGCACGTAATGGTCCTATCATTAATGTAGCTGAAAATCTAGCTGCAAGGTTGCCAGATATATTGTATCCGATAAACCACTGCATGAGGAAATCTGCCCTTGAGTAGTACTTAACTCATCATAAATTACTTTTACCATGACCACTACTAAAGCTGTCAGGCCACCTAACATTCTGGTACTTGGATGTTAAGCTTTAACCAAAGTAAGAAAATAgatgcagattttttttctctcacagaCAATGCAGCTTCTTTTGATTAAAAGAATGACTGAAaagatagataaataaataaaatcagtgAGCAGCTAGAAAACCTTTGgccatcattcatttttatGGTGGGCAATTGTTCTATGAGGTCTGTATCAGAAATTTTAAAATACTTGATGCACTATGTGCCATACATTTTGTAGAAATGTaatcctgttgttttttttctttttgtaataaCCGTTAAAAGTTGTAACTTATGACGTGTATTTTTAATATTCATACTTGAATTGTAAACAGTGTGCTAAATATTGAATGGGCATTGGTACAGAATAAATAAACAGTGTGCTTGTTTGCCATGCTTTATCCAAAGACATTTTTAAGAATCATATATACCTACAGTATCTATGTAGCCTGTATAAAAGAAATGAATGATTGATTCTGGTGCTATGCTTACTAATCGTATCTATACTGTATGACTTGCTACTATACTAACGCTGTtaaaataagtaataataaaaaaaatgcttttgagCTGAA

Function

symbol description
adamts20 Predicted to enable metalloendopeptidase activity. Predicted to be involved in extracellular matrix organization. Predicted to act upstream of or within several processes, including negative regulation of apoptotic process; positive regulation of melanocyte differentiation; and proteolysis. Predicted to be located in extracellular space. Predicted to be active in extracellular matrix. Predicted to colocalize with collagen-containing extracellular matrix.

NR:

description
PREDICTED: A disintegrin and metalloproteinase with thrombospondin motifs 20

GO: NA

KEGG:

id description
K09609 ADAMTS20; a disintegrin and metalloproteinase with thrombospondin motifs 20

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039807628.1 True 8621 mRNA 0.49 39 21874973 21961067

Neighbor

gene id symbol gene type direction distance location
prickle1a prickle1,LOC104925408,LOC104962552 coding downstream 81092 21765682 ~ 21793881 (-)
LOC120564741 LOC104962548,LOC102797891,LOC101479938,LOC102194218,LOC102291278 coding downstream 140879 21726086 ~ 21734094 (-)
dnm1l dnm1l coding downstream 505997 21355580 ~ 21368976 (-)
LOC120563940 NA coding downstream 577374 21284373 ~ 21297599 (-)
zgc:136858 LOC104946800 coding downstream 590233 21277459 ~ 21284740 (-)
twf1a twf1,LOC102795415 coding upstream 52844 22013911 ~ 22029073 (-)
nell2a nell2 coding upstream 130466 22091533 ~ 22211840 (-)
LOC120564446 prl coding upstream 269864 22230931 ~ 22233599 (-)
szl LOC103380347,LOC103353239 coding upstream 273669 22234736 ~ 22236927 (-)
mov10l1 mov10l1 coding upstream 278998 22240065 ~ 22265797 (-)
G87148 NA non-coding downstream 149315 21724923 ~ 21725658 (-)
G87123 cntn1 non-coding downstream 325114 21546658 ~ 21549859 (-)
G87120 NA non-coding downstream 362445 21486532 ~ 21512528 (-)
G87107 nrcam,LOC101067328 non-coding downstream 408727 21462705 ~ 21466246 (-)
G87030 LOC103366871,LOC104946806,LOC106525492,LOC108230167 non-coding downstream 623214 21245010 ~ 21251759 (-)
G87232 NA non-coding upstream 44432 22005499 ~ 22008395 (-)
G87249 NA non-coding upstream 109891 22070958 ~ 22082538 (-)
G87254 NA non-coding upstream 144813 22105880 ~ 22106255 (-)
G87320 nuak1 non-coding upstream 326877 22287944 ~ 22355196 (-)
G87329 appl2 non-coding upstream 426928 22387995 ~ 22390216 (-)
LOC120564778 LOC103358851,LOC101480430,LOC100706913,LOC102797593 other downstream 135629 21735006 ~ 21739344 (-)
G87140 NA other downstream 161419 21713042 ~ 21713554 (-)
dnajb9a dnajb9,LOC100706374,LOC102775779,LOC102215328 other downstream 502464 21369531 ~ 21372509 (-)
LOC120563850 NA other downstream 987347 20877668 ~ 20887626 (-)
LOC120564033 LOC103358331,LOC102195670 other downstream 1045738 20806882 ~ 20829235 (-)
LOC120564428 NA other upstream 386103 22347170 ~ 22366978 (-)
parvg parvg other upstream 728094 22689161 ~ 22706296 (-)
LOC120564579 LOC103366737 other upstream 1450443 23411510 ~ 23422457 (-)
G87538 NA other upstream 1533263 23494330 ~ 23498659 (-)
G87624 LOC103358853,LOC104921025 other upstream 1777915 23738982 ~ 23741190 (-)

Expression


Co-expression Network