si:dkey-24l11.2 (LOC104946603)


Basic Information

Item Value
gene id si:dkey-24l11.2
gene name LOC104946603
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 16820314 ~ 16830164 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039807680.1
TTGGTGCTGTACGTGTTGGAAAATAATGCAGGTTTCTACTCAGACATGTCCCAGCCAGCTCCACCACTCATCCCAACGCTGCCTGTCACTGGATCTGGCTGTACTTGCACCGAGGCGACGCAGCACAACCAGGGTGTTAATAATGATGGAGGATGGTGAGGGAGAGAAGATGGGTGAATCAGAGCCTGTGCTCCATACACAGCAGCTGTGTCGCTTCTTCTCTCAAGGAAGACACTGCAATTTTGGGAAGAAATGCAGATTCCTACACATAAGAGATGATGCCAAAGCTCATGAGAAGAAAACCATCAGGACACCCAGCCAGTCAGACGTTGCATCTCCAAACTCAGAGGTCCCTGGAGGAGATGTGGGGCACAGGCCTCCTCCCATTAGTAACTCCAGGGTTGCTCCAGCAGCTAGCCGCCGCCCCTGCCGCTACTTTATCTCAGGCCACTGCACTATGGAAGACCGATGTCGCTTCTGGCATCCACCACAGTTGCCCCCACTAGATGACCAGCCTGTTCCTGGAAAGAACCCAAGACCTGCACAGAGGATGCCACCAGTACCTCGTCCTGGCATCCTCCAAGAGGTCAAGCTGTGTGACCTGACAGAGAATGTCGCCATGCAGCTACGAGACACAGAGATCGAGCAGTTGAAGAAGCGTTTTCCCAAAGACCAGCTGATTATTCAGGAACAAAGTAATTGCAAAGTTACTTATTACAGGGTGGCTGTAGAGGCCACTGATCCAGACTGGCCCTTTGATCTGAAAGAAGTCGACATCATGGTGAGCTTCCCAGACAGTTACCCCAAAGAGATTTTTACATTGGACATACCGTTGGACCAGGAGCTGCCGCCAATAATGGCAAGACATGTACAGCAAGCATCATTGGAGTGGCTTCAAGCCAAGCATGCAACCAATCAGCTTCTGGGAAAGGTAGAGCTGCTCTTCCGGCCTTTTCTTCGCTGGCTCGATCGTAGTTTGGAGAGACTGTTCACTGAAGGAGCCCGGCAGttaaaaaaagacattgatTTAGAAAAAGCTGGATTGCAGTTCATACCGTACCAGGAACTCCAGGCAACAGTATGTGAAAAATCTGTCAACGATCATTCATCTGACACCGCTGCTGCAGGTGAGGATGTCACTGATGAAGGAAAACTGGAAAAGACAGATAGCGAGAGGAAATTGGAGGGAGGGAAGTTAGTGCAGCAGGAGGGTCCAGGTGGTGATGAAGGGCAGCagcaggagggggaggaggaagccAGTCATCTGGTGGAGAACATTAAGATCAGTGATCCCCGCAGAGGCACAGAGGTAAAGCTGCTGGGACTGCGGCTGGGAGAGAACACAGCCACCGTAGTGGCCAAACAAATCACTGTTTGTCTTCAATGTAACAGGTGTAAGGTAACTGCAGACCTGACACTGACTGGGAGGGCACCCTGCACAGCTCAGTGTGAAAAGTGCAGTGCAAGCATCAATGCTGCATTCAGGCCCTGCATGCTGCACCATTACAGCGATGTCCTGGGATACCTGGACCTTCACAACGCTGCACCTGCTGACCTTGTTCTTCAGGAATGTGAACTCATTGTGGGCTGCCTCAGCTGCTCCCAGGAGGGCCCTGTGCAGAACCTTTCCTATGGTCAAACAAAGGAGTTTAATTGTGAGCACTGCCACAGCAAACTCGGGATTCTGGCTGAGAGCACAAGATTCCAGTATATTCAGCCACGCGCCAGCAAAACAGGTCCAAGTGCTTGTGCTGTTAATTGTAAGACGATAAGAGATCCTGCTGTGCAAAAGGGGAAGCCCCTGCCAGAAAAAGGAGTATGTAAACATTACAGACAGAGCCACCGCTGGCTAAGGTTTCCCTGCTGTGGCCGGGCTTACCCCTGTGATGGGTGCCATGATGAGGACCAGGACCACCCAATGGAACTGGCCACCAGGATGATCTGTGGCTACTGTGCCAAAGAACAGCCGTATGGCAATGGAAAGCCTTGCATCAGCTGTGGAAGCATGATGACGAGAGGTGCACGCACCAGCCACTGGGAGGGAGGACTGGGATGCAGAAACAAAGTCAAAATGAGCAGaAATGATCGACATAAATATGCCAACACCAACAAAACGATTTCAAGGAAGGCCGTCTGTGAAAAGAAGTAGTTGGTGAAGAAGAGCATTATCCCCCTAACTTATGAAAAGACATTTATAAATGATTTCAAAGAAATTATTGCACATTTTCTCCATTGAATCATGTTGTTGTGATTTTTCAGTGTGATTGTGAGAAGTGTTGAAATTGAAAAGTCTGTCAATTGAATGTGGATTGAATTGGA
>XM_039807681.1
GTGCAGTCACTTGTCACTTGAGGTTagctatatactgtctatgcttgAGGTGTTAATAATGATGGAGGATGGTGAGGGAGAGAAGATGGGTGAATCAGAGCCTGTGCTCCATACACAGCAGCTGTGTCGCTTCTTCTCTCAAGGAAGACACTGCAATTTTGGGAAGAAATGCAGATTCCTACACATAAGAGATGATGCCAAAGCTCATGAGAAGAAAACCATCAGGACACCCAGCCAGTCAGACGTTGCATCTCCAAACTCAGAGGTCCCTGGAGGAGATGTGGGGCACAGGCCTCCTCCCATTAGTAACTCCAGGGTTGCTCCAGCAGCTAGCCGCCGCCCCTGCCGCTACTTTATCTCAGGCCACTGCACTATGGAAGACCGATGTCGCTTCTGGCATCCACCACAGTTGCCCCCACTAGATGACCAGCCTGTTCCTGGAAAGAACCCAAGACCTGCACAGAGGATGCCACCAGTACCTCGTCCTGGCATCCTCCAAGAGGTCAAGCTGTGTGACCTGACAGAGAATGTCGCCATGCAGCTACGAGACACAGAGATCGAGCAGTTGAAGAAGCGTTTTCCCAAAGACCAGCTGATTATTCAGGAACAAAGTAATTGCAAAGTTACTTATTACAGGGTGGCTGTAGAGGCCACTGATCCAGACTGGCCCTTTGATCTGAAAGAAGTCGACATCATGGTGAGCTTCCCAGACAGTTACCCCAAAGAGATTTTTACATTGGACATACCGTTGGACCAGGAGCTGCCGCCAATAATGGCAAGACATGTACAGCAAGCATCATTGGAGTGGCTTCAAGCCAAGCATGCAACCAATCAGCTTCTGGGAAAGGTAGAGCTGCTCTTCCGGCCTTTTCTTCGCTGGCTCGATCGTAGTTTGGAGAGACTGTTCACTGAAGGAGCCCGGCAGttaaaaaaagacattgatTTAGAAAAAGCTGGATTGCAGTTCATACCGTACCAGGAACTCCAGGCAACAGTATGTGAAAAATCTGTCAACGATCATTCATCTGACACCGCTGCTGCAGGTGAGGATGTCACTGATGAAGGAAAACTGGAAAAGACAGATAGCGAGAGGAAATTGGAGGGAGGGAAGTTAGTGCAGCAGGAGGGTCCAGGTGGTGATGAAGGGCAGCagcaggagggggaggaggaagccAGTCATCTGGTGGAGAACATTAAGATCAGTGATCCCCGCAGAGGCACAGAGGTAAAGCTGCTGGGACTGCGGCTGGGAGAGAACACAGCCACCGTAGTGGCCAAACAAATCACTGTTTGTCTTCAATGTAACAGGTGTAAGGTAACTGCAGACCTGACACTGACTGGGAGGGCACCCTGCACAGCTCAGTGTGAAAAGTGCAGTGCAAGCATCAATGCTGCATTCAGGCCCTGCATGCTGCACCATTACAGCGATGTCCTGGGATACCTGGACCTTCACAACGCTGCACCTGCTGACCTTGTTCTTCAGGAATGTGAACTCATTGTGGGCTGCCTCAGCTGCTCCCAGGAGGGCCCTGTGCAGAACCTTTCCTATGGTCAAACAAAGGAGTTTAATTGTGAGCACTGCCACAGCAAACTCGGGATTCTGGCTGAGAGCACAAGATTCCAGTATATTCAGCCACGCGCCAGCAAAACAGGTCCAAGTGCTTGTGCTGTTAATTGTAAGACGATAAGAGATCCTGCTGTGCAAAAGGGGAAGCCCCTGCCAGAAAAAGGAGTATGTAAACATTACAGACAGAGCCACCGCTGGCTAAGGTTTCCCTGCTGTGGCCGGGCTTACCCCTGTGATGGGTGCCATGATGAGGACCAGGACCACCCAATGGAACTGGCCACCAGGATGATCTGTGGCTACTGTGCCAAAGAACAGCCGTATGGCAATGGAAAGCCTTGCATCAGCTGTGGAAGCATGATGACGAGAGGTGCACGCACCAGCCACTGGGAGGGAGGACTGGGATGCAGAAACAAAGTCAAAATGAGCAGaAATGATCGACATAAATATGCCAACACCAACAAAACGATTTCAAGGAAGGCCGTCTGTGAAAAGAAGTAGTTGGTGAAGAAGAGCATTATCCCCCTAACTTATGAAAAGACATTTATAAATGATTTCAAAGAAATTATTGCACATTTTCTCCATTGAATCATGTTGTTGTGATTTTTCAGTGTGATTGTGAGAAGTGTTGAAATTGAAAAGTCTGTCAATTGAATGTGGATTGAATTGGA
>XM_039807682.1
TTACGTACGGATACGTTTCTTGTTGCACGTAACGGTGCAGTCACTTGTCACTTGAGGTTagctatatactgtctatgcttgAGGTAATGTTAGCTTTTTAACACTTGTCATTACACGGAATAAGCTTTAACGCGGATCCTTGTGTGTACTTGAGGTGTTAATAATGATGGAGGATGGTGAGGGAGAGAAGATGGGTGAATCAGAGCCTGTGCTCCATACACAGCAGCTGTGTCGCTTCTTCTCTCAAGGAAGACACTGCAATTTTGGGAAGAAATGCAGATTCCTACACATAAGAGATGATGCCAAAGCTCATGAGAAGAAAACCATCAGGACACCCAGCCAGTCAGACGTTGCATCTCCAAACTCAGAGGTCCCTGGAGGAGATGTGGGGCACAGGCCTCCTCCCATTAGTAACTCCAGGGTTGCTCCAGCAGCTAGCCGCCGCCCCTGCCGCTACTTTATCTCAGGCCACTGCACTATGGAAGACCGATGTCGCTTCTGGCATCCACCACAGTTGCCCCCACTAGATGACCAGCCTGTTCCTGGAAAGAACCCAAGACCTGCACAGAGGATGCCACCAGTACCTCGTCCTGGCATCCTCCAAGAGGTCAAGCTGTGTGACCTGACAGAGAATGTCGCCATGCAGCTACGAGACACAGAGATCGAGCAGTTGAAGAAGCGTTTTCCCAAAGACCAGCTGATTATTCAGGAACAAAGTAATTGCAAAGTTACTTATTACAGGGTGGCTGTAGAGGCCACTGATCCAGACTGGCCCTTTGATCTGAAAGAAGTCGACATCATGGTGAGCTTCCCAGACAGTTACCCCAAAGAGATTTTTACATTGGACATACCGTTGGACCAGGAGCTGCCGCCAATAATGGCAAGACATGTACAGCAAGCATCATTGGAGTGGCTTCAAGCCAAGCATGCAACCAATCAGCTTCTGGGAAAGGTAGAGCTGCTCTTCCGGCCTTTTCTTCGCTGGCTCGATCGTAGTTTGGAGAGACTGTTCACTGAAGGAGCCCGGCAGttaaaaaaagacattgatTTAGAAAAAGCTGGATTGCAGTTCATACCGTACCAGGAACTCCAGGCAACAGTATGTGAAAAATCTGTCAACGATCATTCATCTGACACCGCTGCTGCAGGTGAGGATGTCACTGATGAAGGAAAACTGGAAAAGACAGATAGCGAGAGGAAATTGGAGGGAGGGAAGTTAGTGCAGCAGGAGGGTCCAGGTGGTGATGAAGGGCAGCagcaggagggggaggaggaagccAGTCATCTGGTGGAGAACATTAAGATCAGTGATCCCCGCAGAGGCACAGAGGTAAAGCTGCTGGGACTGCGGCTGGGAGAGAACACAGCCACCGTAGTGGCCAAACAAATCACTGTTTGTCTTCAATGTAACAGGTGTAAGGTAACTGCAGACCTGACACTGACTGGGAGGGCACCCTGCACAGCTCAGTGTGAAAAGTGCAGTGCAAGCATCAATGCTGCATTCAGGCCCTGCATGCTGCACCATTACAGCGATGTCCTGGGATACCTGGACCTTCACAACGCTGCACCTGCTGACCTTGTTCTTCAGGAATGTGAACTCATTGTGGGCTGCCTCAGCTGCTCCCAGGAGGGCCCTGTGCAGAACCTTTCCTATGGTCAAACAAAGGAGTTTAATTGTGAGCACTGCCACAGCAAACTCGGGATTCTGGCTGAGAGCACAAGATTCCAGTATATTCAGCCACGCGCCAGCAAAACAGGTCCAAGTGCTTGTGCTGTTAATTGTAAGACGATAAGAGATCCTGCTGTGCAAAAGGGGAAGCCCCTGCCAGAAAAAGGAGTATGTAAACATTACAGACAGAGCCACCGCTGGCTAAGGTTTCCCTGCTGTGGCCGGGCTTACCCCTGTGATGGGTGCCATGATGAGGACCAGGACCACCCAATGGAACTGGCCACCAGGATGATCTGTGGCTACTGTGCCAAAGAACAGCCGTATGGCAATGGAAAGCCTTGCATCAGCTGTGGAAGCATGATGACGAGAGGTGCACGCACCAGCCACTGGGAGGGAGGACTGGGATGCAGAAACAAAGTCAAAATGAGCAGaAATGATCGACATAAATATGCCAACACCAACAAAACGATTTCAAGGAAGGCCGTCTGTGAAAAGAAGTAGTTGGTGAAGAAGAGCATTATCCCCCTAACTTATGAAAAGACATTTATAAATGATTTCAAAGAAATTATTGCACATTTTCTCCATTGAATCATGTTGTTGTGATTTTTCAGTGTGATTGTGAGAAGTGTTGAAATTGAAAAGTCTGTCAATTGAATGTGGATTGAATTGGA

Function

NR:

description
uncharacterized protein LOC110495803

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039807680.1 False 2319 mRNA 0.50 12 16820314 16830164
XM_039807681.1 False 2235 mRNA 0.49 12 16820314 16825472
XM_039807682.1 True 2340 mRNA 0.49 12 16820314 16825506

Neighbor

gene id symbol gene type direction distance location
slc28a1 slc28a1,LOC108230093,LOC106514348 coding downstream 16992 16792154 ~ 16803322 (-)
malt3 LOC104964024,LOC103357518,LOC102077990 coding downstream 43948 16766929 ~ 16776366 (-)
ankrd34c ankrd34c coding downstream 209411 16607362 ~ 16610903 (-)
idh2 idh2,LOC104917827,LOC105932345,LOC107100590,LOC103147849,LOC103466626 coding downstream 226128 16581508 ~ 16594186 (-)
sema4ba sema4b,LOC103368553,LOC100693140,LOC101470126 coding downstream 271290 16462555 ~ 16549024 (-)
pstpip1a pstpip1,LOC102789492 coding upstream 5168 16835332 ~ 16842414 (-)
rcn2 rcn2,LOC102789787 coding upstream 10945 16841109 ~ 16846133 (-)
isl2a isl2,LOC102787860,LOC102305078,LOC101486127,LOC102207021 coding upstream 83373 16913537 ~ 16918273 (-)
tmem266 tmem266 coding upstream 98577 16928741 ~ 16958417 (-)
lactb lactb coding upstream 133313 16963477 ~ 16967097 (-)
G85441 NA non-coding downstream 4167 16811074 ~ 16816147 (-)
G85436 NA non-coding downstream 10812 16809282 ~ 16809502 (-)
G85428 NA non-coding downstream 32332 16784298 ~ 16787982 (-)
G85373 ctsh non-coding downstream 137426 16680151 ~ 16682888 (-)
LOC120564211 NA non-coding downstream 160998 16649841 ~ 16659316 (-)
G85453 scaper,LOC102788151,LOC107662441,LOC107688925 non-coding upstream 36963 16867127 ~ 16869163 (-)
G85460 scaper non-coding upstream 67520 16897684 ~ 16899795 (-)
G85462 scaper,LOC102788151 non-coding upstream 71000 16901164 ~ 16902321 (-)
G85481 etfa non-coding upstream 90285 16920449 ~ 16922142 (-)
LOC120563415 NA non-coding upstream 259941 17090105 ~ 17095763 (-)
G85435 NA other downstream 11898 16808056 ~ 16808416 (-)
trnah-gug_10 NA other downstream 55528 16764715 ~ 16764786 (-)
LOC120563869 frmd5,LOC104917831,LOC102299895,LOC106561170 other downstream 56596 16697095 ~ 16763718 (-)
G85321 NA other downstream 379349 16439374 ~ 16440965 (-)
st8sia2 fam174b,st8sia2,LOC100690985,LOC101474125,LOC102798331 other downstream 611128 16188853 ~ 16209186 (-)
fbxl22 fbxl22 other upstream 795847 17626011 ~ 17645520 (-)
ppcdc ppcdc other upstream 1031549 17861713 ~ 17877065 (-)
dennd4a dennd4a other upstream 1063689 17893853 ~ 17956629 (-)
trnaq-cug_6 NA other upstream 1096883 17927047 ~ 17927118 (-)
G85813 rpl4 other upstream 1200844 18031008 ~ 18036276 (-)

Expression


Co-expression Network