LOC120563512 (LOC104964038,LOC103375536,LOC102794895)


Basic Information

Item Value
gene id LOC120563512
gene name LOC104964038,LOC103375536,LOC102794895
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 16380943 ~ 16409443 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039807711.1
GACGTTGCAGGCAGTATGTCGCCAATAGTCTTCAGTTGTAGAAATGGCAGCGCTGAGACAGGAGCATCGGTATGGGCTCTCCTGTggcaaaatcaacaaaaacacccCGAATCAAACTATTTATCACGTCAAACTCACTGACACTGCCATCCGGACCCTCGAAGCCTACCAGAACCTGAAGgcATCACTATCAAATCAGCCAGCGATTTGCTTCAAGGGGAGCCAGGGGTATGTAAAGATCCCAGCGCCAACCCCTGAATCTCCTGATGGATTCAGAGTCTTCTCGTTCTACCTTTCCAGTGACAGCAAAGACAAGCCTCAGTCCAGCTTTGACTGCATTCACCAGTATGTCTCAGGGGAGGGCAGGGATCACCTGGAGGGCCAGGGCAGCATTCAGGACAAGATCACAGTTTGCGCCACAGACGATTCCTACCAGACGACCCGGGAGCGCATGTCTCAAGTGGAGAAGGACATCTGGAGCCGCTCAGCAATTGAGATCAAGCCAGGGCCAAGTAAGTATGTGAAGGTCCAGAGGAAGCAGGGTCTGGTATCAGGCTCAGATAGCAGCAACAAGCACTCCCCCAGCAATAAGAGGAGCCTGGTTCCCAGCCCTGTGGCACACCGGCCCTTGAGGGATCGCATCGTTCATCTCCTGGCCTTAAAGCCCTACAGGAAACCTGAGCTGCTACTGTGGTTGGAGAGGGAGCGAGCCAGTCCAAAGGACAAGGCTGATCTGACCTCAGTGCTGGATGAGgtTGGTAAACTGAACAATAAAGACCACAGCTACTCTCTGAAGGATGAGCTCTACAGACACGTCCAAAGAGACTGGCCTGGATATCTAGAGGAGGAGAAGCAACTCATCCATAGGCTCCTGATCAGGAAACTTCAACCACTCCACAGTAGCCAGTTGAAGAGTCCCCAGTCCAACCATTCATTCCACAATACTCCAGGGGACTCTCCTTCACATCTAAGTCCTGCCAAGAATCTTTCCGTGAAACGCCCATTGCCCTCGGACCCATCCAACGGTCAGACCCCCAAAAAACAAAGACTATTAGACCAGTGTTTGCCTCTGCAGTCACCGTCTAATGGAGACTACGGCGCCAATGGGGCTCGTAGCTCCTCAAGTCATGGAAACTCTAGAGTACAGATCAAACTGGAGTTCGACAAAACCAACAATCATCTCCAGGGGAGCCCAAATGGTCTGTACTCGCCACACAAACTCAGCGGCTCATCTAATGTTCCCAAACTGGAGAGGACAGAGCCAGCTCCTACTGCACCCAGCCCTAAGCCCCCACACACTGACCAACATACCATTTGCACTGACCAACCATTCACCAACGGCCAACATAAAAAGAAGAGGTCCAAAAAGCACAAAGACAAAGAACGAGAGCGCTTAAAACCAGACTGGATTGAGACGAGTCCAGACCTGAAGCAAAACAGAGAAAATCTCAAAGACCATGAGGGAGAGAAAACACCTGTCAATCGAACCTCAGCAGAGGAACTGCCTGACTATTTAATaaaataCAGCACAATAACGGCACTGGAGCAGCGGCAAGAGTATAAGGACGACTTCTGTGCAGAGTACGATGAATACAGAGCTCTTCATGACCGGATTGGGGCTATCACAGAGATGTTTGTTCAGTTGGGCTCAAAGATCAACACTCTCTCTCCGGGAACACAAGAGTACAAGCTTATGGAGGACCAAATACTACAAAAGTACCGAAAGTATAAGAAAaaATTTCCTGGGTACCGGGAAGAAAAGAAGCGATGCGAGTACCTCCATCAGAAACTGTCGCATATCAAAGGCCTGATCACAGATTATGACCGAGCACAGGGACTCTCCTAGTAACTGGCTTCTACCCTCAACAGGGTGTACTATGACTGGACCAAAAGACTCCTAATGGACCCAAAGACTGCCCAGCTGGATCCTAGAGTCGCTGAAACACTACTCACTTTACTCCTCTGAGTGCTGATGGAATCGAGGAGCAAGGTTATTTTTCAAAAGTGGGCTGAGACCACCGACTCGTGATCAAATGTTGCCCTTTAACATTATGGTTTTCAACTATGATTATCGCTGTAATGGCTTGATTCTGTTCTGCTGTAAAATGGTCCGATGACACAGTGAAAGCCAAATccatttttctaaaatgtaaagcaTATGTGATCATTTTCTGCCTAATTGCATTATTCTATCCTTTATCTTGTCAGGACTCAGAAAAAAGTGttgatttatataaaaaaaaagaacaagtaTTAAATTGATGGTACAATCAATCTTAGAGGGAAACAAATGCTACTAAAGTCTTTATATTTATCATACAGATTAAtctgtttatttgttgtttgctgATAGAAAGTCAACACATCCAATCACATCAATTATTCATTAGTTGCAGTAATAAAATCacacaatgacaataataaGATCCCTCCAATAACGATGTATCTCCCTTCAGACCACATGCAAACAAAATGTTGTCGTCTATATAAAAGCTATATTTATGCAGGACAAAAAAAGATGCATCTCAATGTATCACTAAAATGATCACAACATGAAGTTTAAATCATTATATGCAAAATTCTTTGGGCTTTGATCATAAGGAATCTTATGTAGCATTCTGCCAATGTCCTGTGTCATTTCTAAGAAATGTTAGAATGCCACAAAACCACTCCTCCCAGTTCCGGAATGCTGGTTCCATGAAAGTGCTTGTGTACATTTAGTGTCAACTTCACCCACATGTAGCCTACCACAAACTGCCTTTTCATCATCAACTCTCTCAAGTCTTCTGGTTATAGGTTTGTTTACTAATACACAGTAAATACAGTCATCATGCTTTATTTACGCTGTAGACGAATGACTACAAGCCCTATGAAACATAACTTGTCACTCTACATACCATTTTAAAAGTTAACAGGGTATTTTGTCTTGGTAATCAAGCTTGTCcatacattttttgatttactatgacttttcttggGTTGAAGTCTTGAGATAGATTGCAACAGAGATGCCTTTAACTAATTGGACCTTGTAATTGTTAGTCCAATGTGTGCGGAGGATGGCACTGTGGGCCGGTCGCTCAGTTCATACCACTTTGGTTCAGATGGGTGTAAGGAGCAGGTGGGCCTCTAGAGGCTGCTAGCAGGGCTTTTACACTCATTTTAGACTTTCTGGAATGATTTGTCCCATGGCAGTAACATCTGAATAACCACAAAGTGTAATTTTATTTCACCTTAAAATTTGCTGTAGCCTTAAGTAGGAAATAGTGATCAGATTTCAGTGTTCTCTGGACTTTTGCATCAATGTAGCGGTTGTCTTAATCATGGCTTAAAGTGGGAGGATTAAGCTAATATTTGCCTTAACATGCATGTCAGACATTTCCAAGATTATGCCATCTCTGTTCTGAAATGTTCTTGGTTTAACCTGCACAGTTCAAAGCATTCTTAGACTTTTTCTGTAAATGTCTTTTAGTTTGAAGGAACTTCAGTTACTGGATAGTTGTTACTGGATAGTTGTTGTGTTATCAGTGTTGTTCTTGGTTGTTTTTTCATGTACGTCTtaatcatttttcagttttagcTTCATTTGTTGTCTCATAATCTGTCAAATAATCATGAACTGGTAAGGGATTTAATTCACTGTCCAATCTTATCAAGTACCACTATCATCCTTGCAGAAATCTATACAAAATAATGTGCTTTGCTTCTCTTGATTTCTCAATGAAAATACTTAGTGGGCTTATTGTCACATATTTAGCAGCTCTTTTGCATAAGTTAAATGtgcgttgttgtttttttacatttggagGGTTACTTCTGGTATGTTTGAAGGATTTAAGACTAGCAACAGTTGCTCTGTCTTGGCACATATGAACATTTCCAAATAAGGAATATTTATTAGCACTGACTATTGGAAAAATGAGAATAGTACATCCagattttgagcattaaatatcaACGCTAAAAATGCTGGATTCTTAAAGCTCTGGTACAACTACAGaaatgtttcctttattttggcTGTTTGGATCTCTTCTCAGGACCAGACATCACACTCtgattattttgtcaatataCATTTTGATGAGCCTAGCAAAAAGGCACATAATGTAACTCCACCCAACCAGAGAAAATATCTGACCAGTCAAAATGACTGAAAACAAAGGTTTTGTTCTGGTACTGGATCTGGAAATCAGTGAGGCATGGTTTAATTGTATTAACGTCTGCTCAGATATACAAAACAATGTGTTTTACAGAATTTCTCATTCAAAACAGAAAGGTACTGAATAATAGCAGGATGGAAACGTCCACATAACATCATTTAGACCATGAGACCTTAAAAGTAATAACAATTTAGAGAACTACTTTAAGTTAAGGGCTTCCCGTTTACCACTAAAGTAGTAGTGGTCAATTGTAGAATACATATGTAACCAAACAAATTGCATCATGGGcagaatattattattaatcagtATGAATAAAGATAATCGTACCATTcatgttaacatgtttttgGGAAACCAGACCCTTGGTGAAAGGGGGCCTCTCAAGTGCTaactgtgatgtttttttttactgtcacaGGAGCCAACTACTGATGGTGCCTTTTTCATTCAAAGAGCAGAGCCACTCTGCATGTAACTATCATTGGTAttttgaggggaaaaaaacttgGGCCAGCAGTATTATACAGCTGTAGTTTCACACTGTTGCCACTGTTCAAAGTGCTTTGTTCATAATTTTTTAGATTAAGTTGATATCAGATTATAAAATGTATAGTGTGTCGGCACTGACATTTTTCCAGACATGAAAATTTGGCATTTGAAAAATGCAAGGTTTTCCAGGACTCCAATTAAACTGCATCTAATGTTGCTATTTGTATACAGGTATATTTGGAAGAATGGCctggattttgttttcttttctactTCCAGACCAGCAAACTATTTCCACAAATGTAATACTGGTGCGTTTAGTTGGTTTGTTGGTACTGGAAAAATAATGGAAATGTGAAATCAAACATGTTGCCTATCATGAATCACTGCAATTGATCTACCTAGGAGAacaattttctttatttattgctTTGTATGCATTTGTCCTTTTATAGGATTCATCTTTGCTTAGTTTGTTCATTCTTTTCACAGCAAAATTCAGAGTATGTTGAAAGGGAAATGGAatatatttttgcaatttttgaTGGTGGATGCCTTATCACAATGTCATCCTCTTGAGAAAAGATTTCAGAAAGAAAGTGTATTGTTGTCtcagtataaataaaaaaataaagcttttaATTCAA

Function

NR:

description
PREDICTED: RNA polymerase II elongation factor ELL-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039807711.1 True 5302 mRNA 0.41 12 16380943 16409443

Neighbor

gene id symbol gene type direction distance location
slco3a1 slco3a1 coding downstream 126855 16213775 ~ 16254088 (-)
nr2f2 nr2f2,LOC107388818,LOC100705923,LOC108230091,LOC102227842,LOC104957255,LOC106930729,LOC105023478,LOC106573769 coding downstream 568944 15802424 ~ 15811999 (-)
pgpep1l LOC103364746 coding downstream 917229 15456807 ~ 15463714 (-)
cd9a NA coding downstream 1063098 15310877 ~ 15317845 (-)
syt1b syt1,LOC100710649,LOC102779835,LOC103358504 coding downstream 1076663 15298687 ~ 15304280 (-)
zgc:162879 LOC104964034,LOC103368560,LOC100692867 coding upstream 42590 16452033 ~ 16461232 (-)
sema4ba sema4b,LOC103368553,LOC100693140,LOC101470126 coding upstream 53112 16462555 ~ 16549024 (-)
LOC120563779 NA coding upstream 119999 16529442 ~ 16532441 (-)
idh2 idh2,LOC104917827,LOC105932345,LOC107100590,LOC103147849,LOC103466626 coding upstream 172065 16581508 ~ 16594186 (-)
ankrd34c ankrd34c coding upstream 197919 16607362 ~ 16610903 (-)
G85312 NA non-coding downstream 8024 16371001 ~ 16372919 (-)
G85253 LOC104921699,LOC103367513,LOC104941665,LOC101473242 non-coding downstream 103531 16275651 ~ 16277412 (-)
G85250 NA non-coding downstream 122708 16257975 ~ 16258235 (-)
LOC120563424 NA non-coding downstream 332702 15858841 ~ 16048241 (-)
G85125 NA non-coding downstream 908086 15466582 ~ 15472857 (-)
G85319 NA non-coding upstream 52119 16461562 ~ 16462518 (-)
G85328 NA non-coding upstream 119164 16528607 ~ 16528849 (-)
G85331 NA non-coding upstream 143963 16553406 ~ 16553633 (-)
G85332 NA non-coding upstream 144593 16554036 ~ 16554811 (-)
G85353 NA non-coding upstream 217288 16626731 ~ 16626949 (-)
st8sia2 fam174b,st8sia2,LOC100690985,LOC101474125,LOC102798331 other downstream 171757 16188853 ~ 16209186 (-)
chd2 chd2 other downstream 193607 16155984 ~ 16187336 (-)
G85133 mef2a,mef2aa,LOC107553916 other downstream 836861 15514778 ~ 15544082 (-)
ttc23 LOC104957250 other downstream 896798 15472934 ~ 15484145 (-)
G85014 ppp6r2,LOC103370604 other downstream 1307593 15066039 ~ 15073350 (-)
G85321 NA other upstream 29931 16439374 ~ 16440965 (-)
LOC120563869 frmd5,LOC104917831,LOC102299895,LOC106561170 other upstream 287652 16697095 ~ 16763718 (-)
trnah-gug_10 NA other upstream 355272 16764715 ~ 16764786 (-)
G85435 NA other upstream 398613 16808056 ~ 16808416 (-)
fbxl22 fbxl22 other upstream 1216568 17626011 ~ 17645520 (-)

Expression


Co-expression Network