ankrd34c (ankrd34c)


Basic Information

Item Value
gene id ankrd34c
gene name ankrd34c
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 16607362 ~ 16610903 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039807746.1
ctgggttggcaGATATGAAGTTAAGGACAGAGGTTTTCATcagacacaaattatttttggtCGACTCTGACGTCAAGAGAGTACACGTTTCATTCAACAAGCAGGAAAGTAAGTTATTTATAACCCGCAGCATCTCCAGGTTGTGATCATTGAGTGCGCAGTGAAAGGAATCCTCCCCGTTGGACTGATGTAGTGAGCCTCCATAACAAAAGCCACACAGCTCATGTGCTATGGTGCCAGAAAGGTACGGCGCCCTGTAACCTAAACTAGGACGCGTCGATGGCAACAGTCGCGGCTGAAAAAATAGGGATATTGCGAAGAATTGCAACAAACTTTCTCTTCTGAATGATACATTTTCTCCCGATTCCTTCCCTCTTGCATGACAAAGCACTGGCTACTTTGAGCATGGAAAACCTCTCCTCAGACTGGGACTGTGAGCTGTAAGTTCAACACTGAGAAGATCTGTGATTGGCTGGGAGATGGAAGATATACTGGAGCTGCGGACAGATGGAAACTCACTCCTGAAGGCGGTATGGCTCAGACGCTTGAGACTCACCAGGCTTCTGTTGGAAGGAGGTGCATACATCAATGAGAGCAATGAACGTGGAGAGACTCCACTCATGGTGGCCTGCATGTCCACACACACTGACCAGCAGAGTGTGAGCAAGTCAAAGCTGGTGAAATATTTGCTGGACAACCAGGCAGACCCCAACATACAGGACAAAGCCGGCCGGACAGCTCTAATGCACGCCTGCATCCACAAGGCTGGGCACGAGGTGGTGGATCACCTGCTGAGCAATGGAGCTGATCCCAGTCTAGAGGACAGGAGCGGGGCCTCAACCCTGGTCTACGCCATCAACGCAGATGATAAGATAACACTAAAACTGCTCTTGGATGCATGCAAAGCTAAAGGCAAGGATGTCATTATAATCACCACAGACAAGTCGCCGTCCGGGACTAAAACTACCAAACAGTACTTAAATGTCCCCCCATCACCAGAGCTGGATGAGAGTTCCTCCCCATCATACTGCACCTCTCCGTCTGATATTAATGTCACTGCATCTCCCACACCTGAGCATGATCAACAAAACATAGTCTTCAGTTTCCAGACCAAGCTGAAAACCTCTAGTTCAGCTGCAAAGCTCGTCAACGGGCCCACGTCTCCAACACGCCGGCCTGCGAACCCCAAACGTGCACGTTTGCCTCAGCTGAAGAGGCTGCAGTCAGAGCCTTGGGGGCTAATCGCTCCCTCAGTCCTTGCTGCAGCTGTGGCCCAAGAGGAGAGTAAGAAAGCCAGCTCTGATGAGGATGTTGTTGCAGGGGTAAACGGACTCTCTCTGAGTAAGAGGTCAGCTTTATCTCGACAGAGCAGTGTGGATGGGAAGGACAGCTTATTCCCTCTGGTGGGTGAACAACCATGCAAAATGACAACCTCGCTATCAGTTCCTCTAACGTCCAAAGCATCATATGAGAGATCTCTTAGCCAGCAACAGCCGCTGGCACGGCGCAGTACTGTGCCCACAGAGCAGGACAGCAGCTGCAGTAGTGGACTCGTCAGTCTGAGAGACACAATGCATAGGAGACGTCTGGGGAACGATCACTATGACTCAGACTCACAGCTCTACTCAGACTCTGGCATGTTAGACTCTCCTAAGGTCCCGATGGAGCGAAGGAAACTAAACACTTCTCCACTAGCGATGTTGACCAGCTCCAGAGAATCTCTAGACATCAACGCCAGCCCGTCCTCTCCCAGCACAGCACACAGGCGTGCACCTGGCCTCCTAGAGAGGAGAGGCTCGGGCACACTGCTGCTGGACCACATCTCCCACACCAGGCCCGGCCAGCTGCCCCCTCTCAACATCAACCCCAACCCTCCCATTCCTGACATCGGGGCTAGTAGCAAGCCCTCCTCACCTCTGGCCACAGGTATTAGATCTATAGCTCCAGTAGCACCAAACACAccaaagagaggctgcctcaaGTCCAAGAAGAAACTTGTGAGAAGGCACTCTATGCAAGTGGAGCAGATGAAACAGCTTTCTGATTTTGAAGAGCTGGCTCATTAGTTAGTAATGGTGTTTATGCAGCACATATTGTGGGTGTAGAAAATGCTAACACCATAACTTGTCAGGAAGTACATCCATAGGTTAAACTGTGTAGACTCACAGCCATCTAGATGTTGAATAATGTataatttatataaaatatacagtatatataaaaatatatattgaaaCTAAGCAATATAGATAGACTTCCTCCCTGTGTTACACCCAACCTTAAAACTATTATCTTTTGACTTCAACACCTGCTGTATATGTATTACAATTTTGAATGTAAATGCCAATACAGGGTACTATTCTTCTAAACTAGCTctcttaaggccctgacacaccaaccggATAAttggccgtcggacagtctggcgaggtcagtgactcgagtctgttcggtgtgttccgtgctgtCGTCCGTCGGAGGGGcggtcggccttcattttggccgacctgacctGCTGGGTCGGATGGCGGGCAgtcgaaaatcttttaaactgacctttgtcgatctgaaatgaagacagattcagcagctgtATGGCTTATTTggcgtttcagtgaacta

Function

symbol description
ankrd34c Orthologous to human ANKRD34C (ankyrin repeat domain 34C).

NR:

description
PREDICTED: ankyrin repeat domain-containing protein 34C

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039807746.1 True 2622 mRNA 0.49 2 16607362 16610903

Neighbor

gene id symbol gene type direction distance location
idh2 idh2,LOC104917827,LOC105932345,LOC107100590,LOC103147849,LOC103466626 coding downstream 13176 16581508 ~ 16594186 (-)
sema4ba sema4b,LOC103368553,LOC100693140,LOC101470126 coding downstream 58338 16462555 ~ 16549024 (-)
LOC120563779 NA coding downstream 74921 16529442 ~ 16532441 (-)
zgc:162879 LOC104964034,LOC103368560,LOC100692867 coding downstream 146130 16452033 ~ 16461232 (-)
LOC120563512 LOC104964038,LOC103375536,LOC102794895 coding downstream 197919 16380943 ~ 16409443 (-)
malt3 LOC104964024,LOC103357518,LOC102077990 coding upstream 156026 16766929 ~ 16776366 (-)
slc28a1 slc28a1,LOC108230093,LOC106514348 coding upstream 181251 16792154 ~ 16803322 (-)
si:dkey-24l11.2 LOC104946603 coding upstream 209411 16820314 ~ 16830164 (-)
pstpip1a pstpip1,LOC102789492 coding upstream 224429 16835332 ~ 16842414 (-)
rcn2 rcn2,LOC102789787 coding upstream 230206 16841109 ~ 16846133 (-)
G85332 NA non-coding downstream 52551 16554036 ~ 16554811 (-)
G85331 NA non-coding downstream 53729 16553406 ~ 16553633 (-)
G85328 NA non-coding downstream 78513 16528607 ~ 16528849 (-)
G85319 NA non-coding downstream 144844 16461562 ~ 16462518 (-)
G85312 NA non-coding downstream 234443 16371001 ~ 16372919 (-)
G85353 NA non-coding upstream 15828 16626731 ~ 16626949 (-)
LOC120564211 NA non-coding upstream 38938 16649841 ~ 16659316 (-)
G85361 rasgrf1,LOC108230026,LOC106514342,LOC106921433,LOC103147845,LOC101158694 non-coding upstream 44035 16654938 ~ 16655754 (-)
G85373 ctsh non-coding upstream 69248 16680151 ~ 16682888 (-)
G85428 NA non-coding upstream 173395 16784298 ~ 16787982 (-)
G85321 NA other downstream 166397 16439374 ~ 16440965 (-)
st8sia2 fam174b,st8sia2,LOC100690985,LOC101474125,LOC102798331 other downstream 398176 16188853 ~ 16209186 (-)
chd2 chd2 other downstream 420026 16155984 ~ 16187336 (-)
G85133 mef2a,mef2aa,LOC107553916 other downstream 1063280 15514778 ~ 15544082 (-)
ttc23 LOC104957250 other downstream 1123217 15472934 ~ 15484145 (-)
LOC120563869 frmd5,LOC104917831,LOC102299895,LOC106561170 other upstream 86192 16697095 ~ 16763718 (-)
trnah-gug_10 NA other upstream 153812 16764715 ~ 16764786 (-)
G85435 NA other upstream 197153 16808056 ~ 16808416 (-)
fbxl22 fbxl22 other upstream 1015108 17626011 ~ 17645520 (-)
ppcdc ppcdc other upstream 1250810 17861713 ~ 17877065 (-)

Expression


Co-expression Network