si:ch211-59o9.10


Basic Information

Item Value
gene id si:ch211-59o9.10
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 1152252 ~ 1177870 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039807797.1
gcttttattttgaagtttacTTCCTGTTGTGAGTCAAACAGCAGCGAGTTCTCACCGCCGTCGTTTCGTCCGTTAACAAACCGACAAAAAGGACGTTAACGTTTAGGTGAGTTGTCATCAGCACCCGGATGACATGAGTCCGGTTTTGAGGCGTTTTTAGAGTCGGGAGCCAGTTGTTTTAACAGTGCAGGAGGCGGCCATGGAGGAGCATTTTCCAGGCAGTCCCTGTTCGTCTGAGCCGGAGAGTCCTGGAGGTCTGAACCGAGGCTGCCTTCTCGACCCCGCTGATGGCATCTACCATGATCTCTCCGTCATGGTCCCAGAAACACCCAGCCCGCAGCTCGGCAAACGGAGGAGACACCGTCGCATCGCAGAGGAACACTTGAGCCCGGCGGCTGCTGGCGTGTCTCCAGGGCGACCACATAAGTCCAAACGCAGACGCCTGGCTGCAGCGATGGGGGAGCAGGGCTTCGTCCCAGCTTCCTCTCTCCGAGCCTTTCATCTGGGCCCCTGGCTGGAAGCCCCGCGGCCGACCGCGTCatgctcttcctcctcctcctcctcctcctcctcctcctcctcctccttcctcaccCCAGTATCAGAGGAGGAAGTGGAGGGAGAAGCCAGTCCTGCCTGTCTCAGCCGGAGGTTGAAGCAAAGTCTGATGCCAGCGGCGTCCGCCTCGGCCGAGTCTCTGTCCTTCCTCACCGCGGAGGAGAAAAGATGGCTGAACGGCGAGCAGGGAGACGCCTCAACAgCGGCGCAGGAGATCGTCATCAGCGACGACGACGAGGCCGCCGCTCGCTCCGCccaggaggaggaagacgagGCGTTCGCTCGGAGCCTGCAGGCCCAGTTTGACCAGGAGGAGTCCCACAGCcaacagcatcatcatcatcatcttcatcagcagcagcagcagcagagccacCACGCGTATTATCCCTACATGGAGCCCAGCTGGATGCCTCATCTGCTGGCTGCTGTTTCTCCTCTGGTCTCCTTTGAAGACGATCTGATTGGTCAAACCAGAAGACGTGGGCGGGGCCGGAGGAGGAACGCCCAGCCAGAGCTTTCAGAAGACCTTCAGGGGAACGACTACGAGGCTCTGCTGGCGTTCGAGGAGCGCCAGGGTACCGTGGTGTCCAACAAGCTGAGTCGGAGGGAGATCCAGAGGTTCCCCACCAGAACCTTCCAGTCCACGGGCGGCGCCGGGAGCACGCAgTGTCAGATCTGTTTCTGTGACTACACCAATAAGGAGAAGCTGAGGATCTTGCCCTGTTTCCATGACTACCACGTCCAGTGCATCGACCGGTGGTTAAAGGATAACGCCACCTGTCCCATCTGCAGAGCCAACCTGGTGGACGGCGCCGCTGGCCTCGCCCCCCCCCTCTGACGcccgccccccccaccccctctaaCCCCCCCAGTgttcccgtctctctctctcggtagTTTGTAGTTTTAAAGGACAACTCGTCTGtttttatataactttttattttatttaaactgttttACGTCTGAACTGAATCGActcaaaagaaaataataaaacctCTGAAACCTG

Function

NR:

description
uncharacterized protein LOC110522496 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039807797.1 True 1573 mRNA 0.58 11 1152252 1177870

Neighbor

gene id symbol gene type direction distance location
LOC120563352 LOC102080071,LOC102210666,LOC102302880,LOC101466024 coding downstream 63579 1068789 ~ 1088673 (-)
LOC120564601 rps17,LOC107389132,LOC108428414 coding downstream 168090 967695 ~ 984162 (-)
LOC120564813 NA coding downstream 169889 982236 ~ 982363 (-)
LOC120564812 NA coding downstream 175244 976881 ~ 977008 (-)
LOC120564811 NA coding downstream 177719 974406 ~ 974533 (-)
LOC120563572 NA coding upstream 3636 1181506 ~ 1194264 (-)
sycp3 sycp3 coding upstream 18053 1195923 ~ 1203372 (-)
zgc:101783 NA coding upstream 71927 1249797 ~ 1264054 (-)
LOC120563569 NA coding upstream 265757 1443627 ~ 1452280 (-)
chrm4b NA coding upstream 513499 1691369 ~ 1703414 (-)
G81475 NA non-coding downstream 19587 1129925 ~ 1132665 (-)
G81476 NA non-coding downstream 32012 1118308 ~ 1120240 (-)
G81450 NA non-coding downstream 42836 1015680 ~ 1109416 (-)
G81459 NA non-coding downstream 85339 1065446 ~ 1066913 (-)
G81457 NA non-coding downstream 87415 1064530 ~ 1064837 (-)
G81497 NA non-coding upstream 16005 1193875 ~ 1292564 (-)
G81499 NA non-coding upstream 58860 1236730 ~ 1237745 (-)
G81478 NA non-coding upstream 68153 1246023 ~ 1256519 (-)
G81496 NA non-coding upstream 68516 1246386 ~ 1301755 (-)
G81502 NA non-coding upstream 78899 1256769 ~ 1257934 (-)
G81445 NA other downstream 106740 1004039 ~ 1045512 (-)
glsl NA other downstream 216908 806744 ~ 935344 (-)
LOC120563708 LOC106561532 other downstream 320508 719054 ~ 831744 (-)
LOC120563709 LOC103365992,LOC102289231 other downstream 352528 726856 ~ 799724 (-)
G81085 NA other downstream 589973 561663 ~ 562279 (-)
actr6 actr6 other upstream 26924 1204794 ~ 1235228 (-)
ambra1b ambra1 other upstream 69066 1246936 ~ 1768910 (-)
LOC120563578 LOC108241855,LOC108242154,LOC107380983 other upstream 168375 1346245 ~ 1374380 (-)
G81535 NA other upstream 292958 1470828 ~ 1472927 (-)
kcnj11l LOC103374924,LOC108251025,LOC106531031,LOC103466804,LOC106904500,LOC103148617,LOC102236473,LOC100711429,LOC101469628,LOC102296518,LOC102199411 other upstream 360269 1538139 ~ 1548184 (-)

Expression


Co-expression Network