LOC120563586 (LOC103361099,LOC106096430,LOC104935510,LOC102796586)


Basic Information

Item Value
gene id LOC120563586
gene name LOC103361099,LOC106096430,LOC104935510,LOC102796586
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 26986190 ~ 26990413 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039807833.1
AACAAGTGAgggggtggagagagagagagagcgagagagactgATTCAGATTCAGAGCAGTGTGCTCATTCTGTGTTAACATCTCCCTGTGATATCAATGTATGCAgcctgagGTATTGTGACCTATTACAGAGTCTGAATAGAAAACCCATATCCCAAGATGCAGTGGTGCAGGTGGGCTGGCAGTTGGAAATCACACCTACCAGGTCAGTCTGCAGGGCCGGAGATTGAGGACTCTTTCGACTTTCTTTTCAAAATCATCCTGGTTGGCGACTCGGATGTGGGGAAGACCTGTGTGGTCCAGAGCTTCAAGTCTGGCATATTCATCGAGAAGCAGCAAAACACCATCGGGGTCGACTTTACGGTTCGCACCCTGGACATCGATGGCAAAAAGGTGAAGATGCAGGTGTGGGACACGGCAGGTCAGGAGCGTTTCCGCACCATAACTCAGAGCTACTACCGCAGCGCCCACGGTGCCATGGTGGCCTATGACATCACACGGCGCAGCACATTTGAATCGGTCCCTCACTGGATCAGGGAGGTGGAGCAGTTTGGAGCGGCCAGCGTGGTGCTGATCCTCATTGGTAATAAGTCAGACCTCCAAGCTCAGCGACAGGTGTTGTTCGAGGACGCGTGCACTCTGGCAGAAAACCACGGTGTTCTGGCTGCTCTGGAAACCTCGGCCAAGGAGGCCCAGAACGTGGAGGCGGCCTTCATCCTCATGGCTCGGGAGCTGCTGGCACGCAACGGCATGACCACCATCGAGGAGATCTCCCAAGAATCGCCCCAATTAATTTTGAGTAACAGCACCCACCCGGTTTATGGCACCGTGTCTTCAGATAAAAAGTGTGGGTGCTGAGCAGGGATGTGTTGTTTTAGACTCGTTTGGTAAAAATAGTGTTCACAGTTTAGGAGaaactacatactgtatatgtgttgtgttgtgtgtatgtgtgaaagtTTTGTacatattttgacttttaataTTTATAAAGTTTGTAGAATCAGTAA
>XM_039807834.1
GAACAAGTGAgggggtggagagagagagagagcgagagagactgATTCAGATTCAGAGCAGTGTGCTCATTCTGTGTTAACATCTCCCTGTGATATCAATGTATGCAgcctgagGTATTGTGACCTATTACAGAGTCTGAATAGAAAACCCATATCCCAAGATGCAGTGGTGCAGGTGGGCTGGCAGTTGGAAATCACACCTACCAGGTCAGTCTGCAGGGCCGGAGATTGAGGACTCTTTCGACTTTCTTTTCAAAATCATCCTGGTTGGCGACTCGGATGTGGGGAAGACCTGTGTGGTCCAGAGCTTCAAGTCTGGCATATTCATCGAGAAGCAGCAAAACACCATCGGGGTCGACTTTACGGTTCGCACCCTGGACATCGATGGCAAAAAGATGCAGGTGTGGGACACGGCAGGTCAGGAGCGTTTCCGCACCATAACTCAGAGCTACTACCGCAGCGCCCACGGTGCCATGGTGGCCTATGACATCACACGGCGCAGCACATTTGAATCGGTCCCTCACTGGATCAGGGAGGTGGAGCAGTTTGGAGCGGCCAGCGTGGTGCTGATCCTCATTGGTAATAAGTCAGACCTCCAAGCTCAGCGACAGGTGTTGTTCGAGGACGCGTGCACTCTGGCAGAAAACCACGGTGTTCTGGCTGCTCTGGAAACCTCGGCCAAGGAGGCCCAGAACGTGGAGGCGGCCTTCATCCTCATGGCTCGGGAGCTGCTGGCACGCAACGGCATGACCACCATCGAGGAGATCTCCCAAGAATCGCCCCAATTAATTTTGAGTAACAGCACCCACCCGGTTTATGGCACCGTGTCTTCAGATAAAAAGTGTGGGTGCTGAGCAGGGATGTGTTGTTTTAGACTCGTTTGGTAAAAATAGTGTTCACAGTTTAGGAGaaactacatactgtatatgtgttgtgttgtgtgtatgtgtgaaagtTTTGTacatattttgacttttaataTTTATAAAGTTTGTAGAATCAGTAA

Function

NR:

description
PREDICTED: ras-related protein Rab-19-like isoform X1

GO: NA

KEGG:

id description
K17047 RAB19; Ras-related protein Rab-19

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039807833.1 True 1011 mRNA 0.50 5 26986190 26990412
XM_039807834.1 False 1006 mRNA 0.50 5 26986190 26990413

Neighbor

gene id symbol gene type direction distance location
ush1c ush1c,LOC106561052 coding downstream 15324 26940304 ~ 26970866 (-)
abcc8 abcc8 coding downstream 47815 26868886 ~ 26938375 (-)
kcnj11 kcnj11 coding downstream 117433 26865059 ~ 26868757 (-)
osbpl5 osbpl5,LOC104951242 coding downstream 334079 26587150 ~ 26652111 (-)
th th coding downstream 473662 26505100 ~ 26512528 (-)
ccdc34 NA coding upstream 209 26990622 ~ 26994899 (-)
LOC120564006 NA coding upstream 13830 27004243 ~ 27008779 (-)
LOC120564007 NA coding upstream 19560 27009973 ~ 27013068 (-)
agbl2 agbl2,LOC103361125 coding upstream 28284 27018697 ~ 27033599 (-)
fnbp4 fnbp4 coding upstream 43636 27034049 ~ 27043873 (-)
G88209 mob2 non-coding downstream 122386 26862778 ~ 26863804 (-)
G88170 NA non-coding downstream 192422 26793513 ~ 26793768 (-)
G88163 NA non-coding downstream 214798 26770410 ~ 26771392 (-)
G88106 NA non-coding downstream 436504 26547774 ~ 26549686 (-)
G88101 nap1l4,LOC103366050 non-coding downstream 444178 26537908 ~ 26542012 (-)
LOC120563588 slc15a5 non-coding upstream 10528 27000941 ~ 27001458 (-)
G88245 NA non-coding upstream 12541 27002954 ~ 27004185 (-)
G88272 cnot2,LOC104938479 non-coding upstream 65257 27055670 ~ 27056932 (-)
G88274 NA non-coding upstream 70139 27060552 ~ 27061136 (-)
G88305 NA non-coding upstream 179575 27169988 ~ 27170267 (-)
ptprjb.1 NA other downstream 293946 26653636 ~ 26692244 (-)
phrf1 NA other downstream 1339190 25630776 ~ 25647000 (-)
G87897 NA other downstream 1389429 25596353 ~ 25596761 (-)
G87803 NA other downstream 1920702 25064752 ~ 25065488 (-)
LOC120563922 NA other downstream 3069988 23909169 ~ 23916202 (-)
G88249 mthfs other upstream 22824 27013237 ~ 27014411 (-)
zgc:153031 LOC100703984,LOC102237950,LOC106523206,LOC105917737 other upstream 233549 27223962 ~ 27229372 (-)
G88379 panx2 other upstream 364559 27354972 ~ 27355776 (-)
LOC120564276 LOC103371718,LOC104949276,LOC102797857,LOC100696892 other upstream 633577 27623990 ~ 27650062 (-)
LOC120564781 NA other upstream 821832 27812245 ~ 27824961 (-)

Expression


Co-expression Network