pgpep1l (LOC103364746)


Basic Information

Item Value
gene id pgpep1l
gene name LOC103364746
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 15456807 ~ 15463714 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039807894.1
CTGCAGGAGCTAAAATAAGCCTGGTTGTTTTTCAGTGTCCTGATATGAAAGTGCGTAACAACTAGCCTTCCTATTGACTGTGTCAACTTGACTGCGTTATGAATGGAGGCGAAGTCGTGGTGGTTACAGGCTTCGGACCTTTTCGACAGTTCTTAGTGAACCCCAGTTGGAAAGCAGCCCAGGGCTTGAAGTTGGTCGGATTTGGAGAGCGGACTGATATTTACATCAGGGAGGTGCCAGTGAGTTATGTTAAAACTCAGCAAGTCATTGCTGAGATTTGGCAAACTCTTCACCCGAAGTTTGCTGTACATCTGGGCGTAGCCAGAGGTTCCAGTGTCGTCTTTTTGGAGCAAACAGGAAAGAACAGTGGATACAGAGACAAAGATGTGTGTGGCTTCTGTCCTGAAAGTCAGTGCTGTGTGGAAGGAGGACCAGAGAAACTGGACTCAGTCGTTAACATGAGGGCTGTCGCGAAAGAGTTCAAACAAGCAGGGACGGGTGTCATTTATTCAAGAGATGCTGGCAGGTACCTGTGTGATTTTGCGTATTACTTCTCGCTGTATCACGGTCAGAGGAGAGCAGCCCTCATCCATGTACCGTCATCTGGCAGCCTGACATCAGCTGACAGACTGGTACCTCTGCTGCAGAGCCTCATTCAAACCATGCTGGACCAGCTGGAGGACCCTTCCGAAACCGCTTGAGGAGATGATGAAAGAGGACTTCTCCAAGCCAGCTGTCACAGCGAGGTAGATCTTCTAATGAAGACATTTCACAAGACACAAAGAGATCACTGGTGACGCCGTGGATTAGAAAGTGTGGCCTCGGAGGGAATTAAATAGAGAAAACAGTAGAAGTTCTCATTCATTTATTATTCAAAATttcaggaaaaagaaaatacaagaaatgtTCAGATACACATTTGGAGATGGCATGTCAAAAATACACCATCTCAGTTATAGGTGTGAAAAAACTTTGAGGCCTCAGATACAGagcttgaaagaaaaaaaaaaacagtctagTGAAGGTTTTTGATTATTTCTTTCCACCAATCAGGTAATGAACAGAGATTTTGTGAAAGTATTCTTATAAAACAACAGCAGTAAACCAAGGCCCCCTCAGAAGGTAATAGGAATGCAAATCATAAAAACAGAGGCATGATAATGATAAACCTCAAACTTATTATTGCAGTTTGAATGCACTGACGCATCCTCCATAAACCTGAGGTTTGCATGAAGAACATtcagaagaaagaaaatgataaaGATGACTaagttgaatgtttttttttttttagttagttaCTGTATGTTTACGCTGAAATCTGGTTATGGAAAAAAGCAACTAGTGTGAAGCTGTAAACGTCGGCCTATGATCTTTTCTAATCATGTCGTTTACTCTTTACCATGACTACCCGTAATCTACGCAATATCCCTGTCCTATACATGTCCacgtgtttatttaaatgttgtaGTTGTGACAGGTTCGTGATCTAATGGTAACTAGTAATTCACCTCACGACAGGTCAATGTAATGTCTACTCCCAAAACTGAAAAGTTTGTATCTTATTATTACATGCatccaaacagaaaaaaacaaaacataaatgcacaGATATGTAAAGTAACTACACAAGCtgtttgcttgtcagtggtgATTTCTGTACCGATGTGACATTCAGCAGCAATCAGACTGTTTTTCAACCAAAAAACAATCGTTCACTCTTTGATTCGCTTATATTCTGCacagagaaaatgtttaagATGAAAATTGAGCACCCGGATTTCACATTAGAAGTTACCCAGTGGCCTATTCATAATCCCATTTATTTCTTATTGCTTTTGGGTATTAATTTCAAAATGAATTTTCAAATAGTTGTACGCATCCAGCTCAGAAGCCCTTGCACTGAGACAGCACTCTCCAAGTAGCCGCTGTGAGTAGAAGAACGGAAGTTTTTCTGAGAAGATCCACTGAGGTGACGGTTTTAACCAGCAGCATTAGTGTATGTAGCAGTACAAATAGGCCAGAAAAAGTCGTGCTGAGTTTACTTCCAAATGAtcgaaaagacagaaaaaggtGAAAATTAGCTATCACTAGGGCTAGAACGTCATGGCATTCAGCAGGTAGATTTGGACAGAGGAAGTGATGGCGTTCACGTAAACACTCAGTTTacggggtaaaaaaaaaaaaaaaaa
>XM_039807895.1
CTGCAGGAGCTAAAATAAGCCTGGTTGTTTTTCAGTGTCCTGATATGAAAGTGCGTAACAACTAGCCTTCCTATTGACTGTGTCAACTTGACTGCGTTATGAATGGAGGCGAAGTCGTGGTGGTTACAGGCTTCGGACCTTTTCGACAGTTCTTAGTGAACCCCAGTTGGAAAGCAGCCCAGGGCTTGAAGTTGGTCGGATTTGGAGAGCGGACTGATATTTACATCAGGGAGGTGCCAGTGAGTTATGTTAAAACTCAGCAAGTCATTGCTGAGATTTGGCAAACTCTTCACCCGAAGTTTGCTGTACATCTGGGCGTAGCCAGAGGTTCCAGTGTCGTCTTTTTGGAGCAAACAGGAAAGAACAGTGGATACAGAGACAAAGATGTGTGTGGCTTCTGTCCTGAAAGTCAGTGCTGTGTGGAAGGAGGACCAGAGAAACTGGACTCAGTCGTTAACATGAGGGCTGTCGCGAAAGAGTTCAAACAAGCAGGGACGGGTGTCATTTATTCAAGAGATGCTGGCAGGTACCTGTGTGATTTTGCGTATTACTTCTCGCTGTATCACGGTCAGAGGAGAGCAGCCCTCATCCATGTACCGTCATCTGGCAGCCTGACATCAGCTGACAGACTGGTACCTCTGCTGCAGAGCCTCATTCAAACCATGCTGGACCAGCTGGAGGACCCTTCCGAAACCGCTTGAGGAGATGATGAAAGAGGACTTCTCCAAGCCAGCTGTCACAGCGAGGGTTGTATCTCGTCAAAGTTGGGCCGGAGTACCACCACAGGCCCGTTGGCCGAAACATGTCCTGAGTGCTTGTCCAAGGCTTGGCCTGGAGACGCTGACGCAACTGGGCCCGGGGAGGAGG

Function

NR:

description
PREDICTED: pyroglutamyl-peptidase 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039807894.1 True 2192 mRNA 0.41 5 15460800 15463714
XM_039807895.1 False 867 mRNA 0.51 6 15456807 15463714

Neighbor

gene id symbol gene type direction distance location
cd9a NA coding downstream 138962 15310877 ~ 15317845 (-)
syt1b syt1,LOC100710649,LOC102779835,LOC103358504 coding downstream 152527 15298687 ~ 15304280 (-)
otogl otogl,LOC102779350 coding downstream 164845 15262486 ~ 15291962 (-)
ptprq ptprq,LOC107705767 coding downstream 194994 15219750 ~ 15261813 (-)
LOC120563965 ptprq coding downstream 219191 15234332 ~ 15237616 (-)
nr2f2 nr2f2,LOC107388818,LOC100705923,LOC108230091,LOC102227842,LOC104957255,LOC106930729,LOC105023478,LOC106573769 coding upstream 338710 15802424 ~ 15811999 (-)
slco3a1 slco3a1 coding upstream 750061 16213775 ~ 16254088 (-)
LOC120563512 LOC104964038,LOC103375536,LOC102794895 coding upstream 917229 16380943 ~ 16409443 (-)
zgc:162879 LOC104964034,LOC103368560,LOC100692867 coding upstream 988319 16452033 ~ 16461232 (-)
sema4ba sema4b,LOC103368553,LOC100693140,LOC101470126 coding upstream 998841 16462555 ~ 16549024 (-)
LOC120563610 NA non-coding downstream 253 15455840 ~ 15456554 (-)
LOC120563611 NA non-coding downstream 1293 15453209 ~ 15455514 (-)
G85084 NA non-coding downstream 93382 15361837 ~ 15363425 (-)
G85027 NA non-coding downstream 277634 15178340 ~ 15179173 (-)
G85011 ppp6r2 non-coding downstream 393670 15062611 ~ 15063137 (-)
G85125 NA non-coding upstream 2868 15466582 ~ 15472857 (-)
LOC120563424 NA non-coding upstream 395127 15858841 ~ 16048241 (-)
G85250 NA non-coding upstream 794261 16257975 ~ 16258235 (-)
G85253 LOC104921699,LOC103367513,LOC104941665,LOC101473242 non-coding upstream 811937 16275651 ~ 16277412 (-)
G85312 NA non-coding upstream 907287 16371001 ~ 16372919 (-)
G85014 ppp6r2,LOC103370604 other downstream 383457 15066039 ~ 15073350 (-)
si:ch1073-390k14.1 LOC103375950 other downstream 489024 14961860 ~ 14967783 (-)
LOC120563775 cacna2d1,LOC104952157 other downstream 898579 14501896 ~ 14558228 (-)
LOC120564470 NA other downstream 1219855 14223197 ~ 14236952 (-)
zgc:77752 NA other downstream 1419091 14031104 ~ 14037716 (-)
ttc23 LOC104957250 other upstream 9220 15472934 ~ 15484145 (-)
G85133 mef2a,mef2aa,LOC107553916 other upstream 51064 15514778 ~ 15544082 (-)
chd2 chd2 other upstream 692270 16155984 ~ 16187336 (-)
st8sia2 fam174b,st8sia2,LOC100690985,LOC101474125,LOC102798331 other upstream 725139 16188853 ~ 16209186 (-)
G85321 NA other upstream 975660 16439374 ~ 16440965 (-)

Expression


Co-expression Network