LOC120563620


Basic Information

Item Value
gene id LOC120563620
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 20859420 ~ 20877134 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039807909.1
CGCTGCCAGCAGTCGGTGCGGCTCCGTGTCCGGTGAGAATGAGCTGTGTGCAGCAGGAGGATCACATGTGTTGCTCGAACAAAAGTTGGGAAACTGGATTTTGGACGGATAACTTGGAGTCGACGGCTTGAGATGTTTCCGGACTCAAACGATTGTTTATTTTCGCTGCACTGATTGAAAAGAATTGAGAAAACAGAAGCGAAGCGATGATTAACTCAGCCATGCAAAAGCCACCTGTGGCCCCAAAACCAAAGCTGACCCAGCTCCAGAGGCCAGGGCTGTCTCCCTCAACCCCCAGAAGAGACAGCCTCTCGCTCCCATCTCCTGGCAAACTGACGAGGGTTAAGCCAGTACTGGCCCCCAAACCCTGCCTCTCCAAACTCGCCACTACTGTGAAATCCAAGCCACACGCTTCAAAGAGCCAGCTCCAAACATCTGTAACAGAAATCCCGCAGATTGAAGGTCCTCTTAACTCTCAAAATGGAATACAGCAAGAGAACAAAAAGCCAGACTGGGATTATATTATTCCTATTTGTCTGTGTAGCCAGGAAAACTGCATGTGCATCAGGAACACATCAGCAAACAGAAAGCTTCTCCCTACATCTCGAGGTAGTGTGGATAACAGTGGCGAGAAAACAGACAATGCTAAGTGCAAAGCGATGAACACTTCCACTAATACCAACCTCACAAGCCATAAACCTCTTCAAGAAACATTCACTTTAGACAGAATTCTCAACACAGACATCAATACCTCCAGTCCTGAGGTGACTGTTAGGCCGTCCCTTCCTCACAGAACATGGAGCGATGAGGCAAATGGTAACGTAATACCTCAGAGTGCACCTGGGCGAGGACCAGAGGAAGATGCTTTTGGCTCAAAGCAAATACCTTGTGCTCCCCAGCCCAAACCAGTCCCAGCAGCCTCGAGGAAGCCCATCCCTGTCCCTGTACCACGGAAACCCAGGGCGGTGGTGCTGGCCCGTCAGGAAAAGGTGGAGGAGGCGAGTGAAGAGATTGTAGGCCAGGATGGGAGGGAAATGATAGTCAAAGAGGTGAAGGTGTCATCAGAGGGGAAAGGAAGCTCATCACTGTCTGTCAGTGTACCTGTTGGAAACAAGATGCCAATATTTCTGTCAGCGAGAAAAGCCTGCGCTCCGCCTGCCCCTCCGCCCGTGAAAAAGCCTTTCCTGTCTGCACCTGCTCCTCAGACGCTCCCAAAGGATGTGGAGGAGGAAGACCTGGGTTGGGACAGAAGCATCCAGGAGATGGAGGTATCTGTTGATAAGGAGGATGAAGAGGTGGAGAAGGAAGGAACTCATGATCAGGAGGCCGTCTACAGTGACTTCACACATAGTCCTCCTTCTAGCAGTTTACTCAGTCAACCGGTGCTACGCGAACCTCCTGCCCCCACTGAGGCAGCAGAGGACAGGGTGGTCAAGGTAGTTCCAAAGAAGCCCCAGAGAAACAGCAGCCCGATGGCATGGGTGCAGAGGAAGGAATCCTCTGAGGAGAAAGAAGAGTGTAATTTAGGAGATGATGAGAAAAGGCAGGCAGATTGTGTTTTGAAGGAGAGAGTGATGAGAAAGCTGTCTTTGCCTCCAAAAGAGAAAACGAGCAAACAACTCTCAACGCCTGGAATCACCAAGCCTTCTCGGTCCAGCAAACAGAGAGCCAAGTCGTTCTCTGCTGCTGACCTCCATCGCTCCGAGGGACAGAAGAGGAACTCTTTCCGGAAACTTCTGGACTTGAAGCTCTCTGTGAAGATGCTTCCCAAGCTGATACTAAAAGGAGGCCAGAGCTCGGAGTGCACTGTCAACGATAATGAACAAAGTGTGGACAGGGACCAAGATGGATGTCAGGGCTTCCACAAGCCTCTTCAGGCTCAATGCGAATTCTCCTGCCTGCTGATTGGAGTAGAGCAAAGCGTGGACGGAGACGAGTTTTCTCCTGAAACAGACCAAGGGGTTTACTATGAGAACATGCCTTACTATGAAGAGATACCAGACTACATGAACGTGCATGTAGGAAGTGCAGTGACATCCCATTGTGCATCCATCTCCCAGCCTACAGCCTGGCAGTATAACGATGAGGACATTTATGAGGAGCAGGAGCCATATATGTCCTTTGAGAAGAACACTGGACACCAACAGTGTCAGACGCCAACAGATTGTGAGAGAAGCTCTGTTGATGAGGAGATGACGCCCCTGGATGATGACATCTTTGACAACACATCAGAGGACGAGGACGATAGCAGCTCCATCTCAAGTAAAGGAGACCATGAGCAGCCAGAGGAGAGTACGACACAGAGTGGACAGAAGAAGAGCAAGATTCACCACATCGCCACAGAAATCATGAGCTCTGAGAGTGTATTTGTTGATGTCCTGAAGCTGCTTCATGTCGACTTCCGTAGTGCTGTGTCCACAGCATCTCATCAGACTGGGAAGCCTGTGATTGAGGAGCGTCTTCTCAACCAGATTCTGTACTACCTCCCACAGCTCTACGAACTCAACCAAGACCTGCTCCGAGAGCTGAAACAGAGAGTGGCCAATtgGGATGAGAATTCCCAGCTAGCAGACATTTTCGTGAAGAAAGGGCCCTATCTGAAGATGTACTCCACATACATCCGCGAGTTTGACAAGAATGTGGCTCTACTGGAAGAGCAGAGTAAGAAGAACTCCGCATTCTGCGCAGTGGTACGGGAATTTGAGgCCAGTCCATGTTGTGCCAACTTGGCTCTGAAGCATTACCTACTGAAGCCTGTTCAAAGGATTCCTCAGTATCGGATGTTGCTCACAGACTATCTTAAAAACCTGTCTGAAGACTCAGATgattacaaagacacacaagCTGCCCTTGCAATAGTGAAAGAGGTGGCCAATCATGCCAACGACATCATGAAACAAGGGGATATCTTTCAGAAACTGATACAGGTGCAGTGCAGTCTGAATGGCCACCACGAAATAGTTCAGCCTGGGCGGATCTTCCTGAAAGAGGGAATCCTGAAGAAGCTGTCCAGGAAGGTCATGCAGCCTAGAATGTTCTTCCTGTTTAACGACACATTGCTGTACACCACTCCTGTCCAGTCAGGCCAGTACAAGTTCAACAACATGTTGTCACTTGCTGGGATGAAGGTTAGCAAACCAAGCCAAGAGGCCTATCAGAATGAGCTGAACATTGAGAGCGTGGAGCGTTCCTTCATTCTCTCCGCGAGTTCAGCCACAGAGCGAGATGAATGGCTTGAGGCCATTTCCACAGCGATCAGTGAGTACACCAGGAAGAAGATCAGTTTTATATCTGGCAAGCCTCCAGAAGAGGTAGAGCTGAAAGATTTTAGTGATGGTGCTCCTTTGGGATCCAAAGCCCCTATATGGATCCCTGACCCACGGACCACCATGTGTATGATCTGTACCTGTGAGTTCACCCTAACATGGAGGAGACATCACTGCCGTGCATGTGGGAAGGTGGTGTGTCAGTCTTGTTCCTCCAATAAATACGGTCTTGAATACCTAAAGAACCAGTTAGCACGAGTGTGTGACCAGTGTTTCCCTGTTCTTCAGCAGCAGAAAAGTGAACGAGTCCTATCGGCAGCTGTATCCCCTGGAACCAGAGCTACCTTTGCTTTCCCCAGGAAGCATAAGAAGATACCTGCGGCCCTCAAAGAGGTGTCAGCAAGCACAGACAACTCATCCATGAGTGGGTATCTGCAGAGGTCAAAGGGCAACAAGAAGCAGGGGAAGAGGCTGTGGTTTGTCATCAAAGACAAGGTCCTGTACACGTATGCTGCAAGTGAGGATGTTGCAGCCTTAGAGAGTCAGCCCCTGTTAGGGTTCATGTTAAAAGTTGATTCATCACTGAAGTTACAGTTTAAGCTTtaccacaaaaacacactttacTACATTTTTAAAGCTGACGACCTCCAAACAGCACAGAGatgGATCAACTCATTCAAAGAAGCCACAGTACTTTAATATCGGCTGACAGTGTGTGTAGCTGTTCAACATATTGTTTTACCTCAGTGCTCTCTGAATTCTGCTGAAAGCATCTGGAGACACCATAATAGTTGCACTGAAATAAATTTACATTGTTTTAAGAGTAGAAATTAGCCATGTTAGTTTTGTATGTTAACATGAATCTTTTCCACCAGGATTTATGCAGTTTGGCTGCAATTTAAGAATCATATGccacaataattttttttttttaacacttggattttgttacatttgaattgcatttttTGTAACCTGCTTGGATCTCCATAACACAGATTTGTAATGCATACTGTCATAACATTTTCATTCAAGTATTTTTAGAGGTCAAAACAAATCATATATATGTTTCTTGTTGTCAGGGAATAACTACTTTATTTAACATCCATACAGCTGGCTGTATACCACACAATGTGCACTTTTCACACTTGTATAAGAAACTTTCACCTTAAATTAAAAAGCCTTTCTGTAACTCTGAATCTAACCTAGACTCACTAATGGTGTATCAGGGGAATCTTCACTGTTTGGACAAAACTGTACCATAATGTACATTGCACTTAAGTAACTCCAATGGCTGTACATAGATCATATCCCTACACAGATATTCTGTATATATAGAGGATTGTAAATGAAATGCAATCAAATGTACATAAATCTCACTTTTACTGTTTAAATTCTGTCACTGTAATACATTGCTTTACTTTCAACTGTAGAGGGAACAAACTGTTGGGGTGCACATTAAAATTGTGGAAAAGCAATACTTATTGTACTGTAACTGAATAGCTTTTGATTAAATCATATTTTCATTGGA
>XM_039807910.1
tcctcctctgcctgtTGAGATGCATCATTAGCTGGATTACTGTGCTGTTGTGTGGAGTGGCAAACATGAGCCATGCAAAAGCCACCTGTGGCCCCAAAACCAAAGCTGACCCAGCTCCAGAGGCCAGGGCTGTCTCCCTCAACCCCCAGAAGAGACAGCCTCTCGCTCCCATCTCCTGGCAAACTGACGAGGGTTAAGCCAGTACTGGCCCCCAAACCCTGCCTCTCCAAACTCGCCACTACTGTGAAATCCAAGCCACACGCTTCAAAGAGCCAGCTCCAAACATCTGTAACAGAAATCCCGCAGATTGAAGGTCCTCTTAACTCTCAAAATGGAATACAGCAAGAGAACAAAAAGCCAGACTGGGATTATATTATTCCTATTTGTCTGTGTAGCCAGGAAAACTGCATGTGCATCAGGAACACATCAGCAAACAGAAAGCTTCTCCCTACATCTCGAGGTAGTGTGGATAACAGTGGCGAGAAAACAGACAATGCTAAGTGCAAAGCGATGAACACTTCCACTAATACCAACCTCACAAGCCATAAACCTCTTCAAGAAACATTCACTTTAGACAGAATTCTCAACACAGACATCAATACCTCCAGTCCTGAGGTGACTGTTAGGCCGTCCCTTCCTCACAGAACATGGAGCGATGAGGCAAATGGTAACGTAATACCTCAGAGTGCACCTGGGCGAGGACCAGAGGAAGATGCTTTTGGCTCAAAGCAAATACCTTGTGCTCCCCAGCCCAAACCAGTCCCAGCAGCCTCGAGGAAGCCCATCCCTGTCCCTGTACCACGGAAACCCAGGGCGGTGGTGCTGGCCCGTCAGGAAAAGGTGGAGGAGGCGAGTGAAGAGATTGTAGGCCAGGATGGGAGGGAAATGATAGTCAAAGAGGTGAAGGTGTCATCAGAGGGGAAAGGAAGCTCATCACTGTCTGTCAGTGTACCTGTTGGAAACAAGATGCCAATATTTCTGTCAGCGAGAAAAGCCTGCGCTCCGCCTGCCCCTCCGCCCGTGAAAAAGCCTTTCCTGTCTGCACCTGCTCCTCAGACGCTCCCAAAGGATGTGGAGGAGGAAGACCTGGGTTGGGACAGAAGCATCCAGGAGATGGAGGTATCTGTTGATAAGGAGGATGAAGAGGTGGAGAAGGAAGGAACTCATGATCAGGAGGCCGTCTACAGTGACTTCACACATAGTCCTCCTTCTAGCAGTTTACTCAGTCAACCGGTGCTACGCGAACCTCCTGCCCCCACTGAGGCAGCAGAGGACAGGGTGGTCAAGGTAGTTCCAAAGAAGCCCCAGAGAAACAGCAGCCCGATGGCATGGGTGCAGAGGAAGGAATCCTCTGAGGAGAAAGAAGAGTGTAATTTAGGAGATGATGAGAAAAGGCAGGCAGATTGTGTTTTGAAGGAGAGAGTGATGAGAAAGCTGTCTTTGCCTCCAAAAGAGAAAACGAGCAAACAACTCTCAACGCCTGGAATCACCAAGCCTTCTCGGTCCAGCAAACAGAGAGCCAAGTCGTTCTCTGCTGCTGACCTCCATCGCTCCGAGGGACAGAAGAGGAACTCTTTCCGGAAACTTCTGGACTTGAAGCTCTCTGTGAAGATGCTTCCCAAGCTGATACTAAAAGGAGGCCAGAGCTCGGAGTGCACTGTCAACGATAATGAACAAAGTGTGGACAGGGACCAAGATGGATGTCAGGGCTTCCACAAGCCTCTTCAGGCTCAATGCGAATTCTCCTGCCTGCTGATTGGAGTAGAGCAAAGCGTGGACGGAGACGAGTTTTCTCCTGAAACAGACCAAGGGGTTTACTATGAGAACATGCCTTACTATGAAGAGATACCAGACTACATGAACGTGCATGTAGGAAGTGCAGTGACATCCCATTGTGCATCCATCTCCCAGCCTACAGCCTGGCAGTATAACGATGAGGACATTTATGAGGAGCAGGAGCCATATATGTCCTTTGAGAAGAACACTGGACACCAACAGTGTCAGACGCCAACAGATTGTGAGAGAAGCTCTGTTGATGAGGAGATGACGCCCCTGGATGATGACATCTTTGACAACACATCAGAGGACGAGGACGATAGCAGCTCCATCTCAAGTAAAGGAGACCATGAGCAGCCAGAGGAGAGTACGACACAGAGTGGACAGAAGAAGAGCAAGATTCACCACATCGCCACAGAAATCATGAGCTCTGAGAGTGTATTTGTTGATGTCCTGAAGCTGCTTCATGTCGACTTCCGTAGTGCTGTGTCCACAGCATCTCATCAGACTGGGAAGCCTGTGATTGAGGAGCGTCTTCTCAACCAGATTCTGTACTACCTCCCACAGCTCTACGAACTCAACCAAGACCTGCTCCGAGAGCTGAAACAGAGAGTGGCCAATtgGGATGAGAATTCCCAGCTAGCAGACATTTTCGTGAAGAAAGGGCCCTATCTGAAGATGTACTCCACATACATCCGCGAGTTTGACAAGAATGTGGCTCTACTGGAAGAGCAGAGTAAGAAGAACTCCGCATTCTGCGCAGTGGTACGGGAATTTGAGgCCAGTCCATGTTGTGCCAACTTGGCTCTGAAGCATTACCTACTGAAGCCTGTTCAAAGGATTCCTCAGTATCGGATGTTGCTCACAGACTATCTTAAAAACCTGTCTGAAGACTCAGATgattacaaagacacacaagCTGCCCTTGCAATAGTGAAAGAGGTGGCCAATCATGCCAACGACATCATGAAACAAGGGGATATCTTTCAGAAACTGATACAGGTGCAGTGCAGTCTGAATGGCCACCACGAAATAGTTCAGCCTGGGCGGATCTTCCTGAAAGAGGGAATCCTGAAGAAGCTGTCCAGGAAGGTCATGCAGCCTAGAATGTTCTTCCTGTTTAACGACACATTGCTGTACACCACTCCTGTCCAGTCAGGCCAGTACAAGTTCAACAACATGTTGTCACTTGCTGGGATGAAGGTTAGCAAACCAAGCCAAGAGGCCTATCAGAATGAGCTGAACATTGAGAGCGTGGAGCGTTCCTTCATTCTCTCCGCGAGTTCAGCCACAGAGCGAGATGAATGGCTTGAGGCCATTTCCACAGCGATCAGTGAGTACACCAGGAAGAAGATCAGTTTTATATCTGGCAAGCCTCCAGAAGAGGTAGAGCTGAAAGATTTTAGTGATGGTGCTCCTTTGGGATCCAAAGCCCCTATATGGATCCCTGACCCACGGACCACCATGTGTATGATCTGTACCTGTGAGTTCACCCTAACATGGAGGAGACATCACTGCCGTGCATGTGGGAAGGTGGTGTGTCAGTCTTGTTCCTCCAATAAATACGGTCTTGAATACCTAAAGAACCAGTTAGCACGAGTGTGTGACCAGTGTTTCCCTGTTCTTCAGCAGCAGAAAAGTGAACGAGTCCTATCGGCAGCTGTATCCCCTGGAACCAGAGCTACCTTTGCTTTCCCCAGGAAGCATAAGAAGATACCTGCGGCCCTCAAAGAGGTGTCAGCAAGCACAGACAACTCATCCATGAGTGGGTATCTGCAGAGGTCAAAGGGCAACAAGAAGCAGGGGAAGAGGCTGTGGTTTGTCATCAAAGACAAGGTCCTGTACACGTATGCTGCAAGTGAGGATGTTGCAGCCTTAGAGAGTCAGCCCCTGTTAGGGTTCATGTTAAAAGTTGATTCATCACTGAAGTTACAGTTTAAGCTTtaccacaaaaacacactttacTACATTTTTAAAGCTGACGACCTCCAAACAGCACAGAGatgGATCAACTCATTCAAAGAAGCCACAGTACTTTAATATCGGCTGACAGTGTGTGTAGCTGTTCAACATATTGTTTTACCTCAGTGCTCTCTGAATTCTGCTGAAAGCATCTGGAGACACCATAATAGTTGCACTGAAATAAATTTACATTGTTTTAAGAGTAGAAATTAGCCATGTTAGTTTTGTATGTTAACATGAATCTTTTCCACCAGGATTTATGCAGTTTGGCTGCAATTTAAGAATCATATGccacaataattttttttttttaacacttggattttgttacatttgaattgcatttttTGTAACCTGCTTGGATCTCCATAACACAGATTTGTAATGCATACTGTCATAACATTTTCATTCAAGTATTTTTAGAGGTCAAAACAAATCATATATATGTTTCTTGTTGTCAGGGAATAACTACTTTATTTAACATCCATACAGCTGGCTGTATACCACACAATGTGCACTTTTCACACTTGTATAAGAAACTTTCACCTTAAATTAAAAAGCCTTTCTGTAACTCTGAATCTAACCTAGACTCACTAATGGTGTATCAGGGGAATCTTCACTGTTTGGACAAAACTGTACCATAATGTACATTGCACTTAAGTAACTCCAATGGCTGTACATAGATCATATCCCTACACAGATATTCTGTATATATAGAGGATTGTAAATGAAATGCAATCAAATGTACATAAATCTCACTTTTACTGTTTAAATTCTGTCACTGTAATACATTGCTTTACTTTCAACTGTAGAGGGAACAAACTGTTGGGGTGCACATTAAAATTGTGGAAAAGCAATACTTATTGTACTGTAACTGAATAGCTTTTGATTAAATCATATTTTCATTGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039807909.1 True 4797 mRNA 0.46 21 20859420 20877134
XM_039807910.1 False 4648 mRNA 0.46 21 20859420 20876275

Neighbor

gene id symbol gene type direction distance location
nr2c1 nr2c1 coding downstream 482 20850776 ~ 20858938 (-)
LOC120563622 LOC103358318,LOC104940631 coding downstream 10693 20836690 ~ 20848727 (-)
LOC120564151 flnc,LOC103358317,LOC102787912,LOC102305697,LOC102200922 coding downstream 55545 20780707 ~ 20803875 (-)
kcnd2 LOC104940628,LOC101467844,LOC102200463,LOC102788385,LOC100700816,LOC103358316 coding downstream 97231 20727141 ~ 20762189 (-)
hsp90b1 hsp90b1,LOC102789166 coding downstream 151225 20687065 ~ 20708195 (-)
LOC120563851 LOC104963714,LOC103358322 coding upstream 17670 20894804 ~ 20904815 (-)
hal hal,LOC102785645 coding upstream 42096 20919230 ~ 20931076 (-)
LOC120564353 cdk17,LOC106573057 coding upstream 63820 20940954 ~ 20973166 (-)
camk1db LOC104963721,LOC101175563,LOC105938601,LOC102229393,LOC106946080 coding upstream 105420 20982554 ~ 21002394 (-)
dhtkd1 dhtkd1,LOC102784200 coding upstream 127249 21004383 ~ 21024546 (-)
G86761 NA non-coding downstream 159783 20698815 ~ 20699637 (-)
G86686 NA non-coding downstream 397597 20402744 ~ 20461823 (-)
G86660 NA non-coding downstream 595214 20250890 ~ 20264206 (-)
G86652 reln non-coding downstream 617570 20241433 ~ 20241850 (-)
G86605 NA non-coding downstream 843608 20014338 ~ 20015812 (-)
G86853 NA non-coding upstream 31255 20908389 ~ 20908590 (-)
G86976 NA non-coding upstream 225496 21102630 ~ 21103379 (-)
LOC120563411 NA non-coding upstream 263373 21140507 ~ 21146513 (-)
G87030 LOC103366871,LOC104946806,LOC106525492,LOC108230167 non-coding upstream 367876 21245010 ~ 21251759 (-)
G87107 nrcam,LOC101067328 non-coding upstream 585571 21462705 ~ 21466246 (-)
LOC120564033 LOC103358331,LOC102195670 other downstream 30185 20806882 ~ 20829235 (-)
G86638 NA other downstream 600161 20252639 ~ 20259259 (-)
cep152 cep152,LOC104960117 other downstream 1285732 19557452 ~ 19573688 (-)
G86402 LOC103363837 other downstream 1470845 19387822 ~ 19388575 (-)
arpp19b arpp19,LOC100693429,LOC102791975,LOC106919339,LOC101065895 other downstream 1541942 19315385 ~ 19317478 (-)
LOC120563850 NA other upstream 534 20877668 ~ 20887626 (-)
dnajb9a dnajb9,LOC100706374,LOC102775779,LOC102215328 other upstream 492397 21369531 ~ 21372509 (-)
G87140 NA other upstream 835908 21713042 ~ 21713554 (-)
LOC120564778 LOC103358851,LOC101480430,LOC100706913,LOC102797593 other upstream 857872 21735006 ~ 21739344 (-)
LOC120564428 NA other upstream 1470036 22347170 ~ 22366978 (-)

Expression


Co-expression Network