nr2c1 (nr2c1)


Basic Information

Item Value
gene id nr2c1
gene name nr2c1
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 20850776 ~ 20858938 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039807911.1
CTGCGCATGTGCGTAAATCGTTTATTGATGAAAAAAGGTCACGAACTCTGACCCTCCCACCAACTGAAACAAAcagttaaaatataaatgtattgaaGACTATACATTATCTGACCCAACAACTCCTTGGCAGGTGTGCATGCCTCATGGGGCACTGATGTGAAGAGCAGTTGAAGAAGGTGCGTGCATTATCAGAATGGATGGACAGACTCAAAGGATTCAACTTGTGTCAGCAGACAGCAACATGGCATTAGGACACAGAATCCAGATTGTAACTGATCAGCAGACTGGCCAGAAGATCCAGATTGTTACAGCACTTGAGCCATCCTCCCCTGGAAAGCAGCAGTTTATCCTAGCAAATGCTGACTATTCCTCTGGTGGGAAGGTGATCCTGGCCAAGCAGGAAGGCTCACCCAACAAGGTCATCCTCACCACTCCAGACGGCTCTGGGGTTAACCAGTTGTTGTTTGCCTCCCCTGATTTGGCTGGGCAGCAGATTCAGTTTGTGACTGAAGGGTCAGACCAGTCCATTGGGAAGCCAGTTGTGGAGTACTGCGTTGTCTGTGGGGACAAGGCCTCAGGCCGTCATTACGGAGCTGTTAGCTGTGAGGGCTGTAAGGGCTTCTTCAAACGCAGTATTAGAAAGAACCTAGTGTACACGTGCAGGGGCTCCGGAGAGTGTGCCATCAACAAGCTCCACCGAAACCGCTGCCAGTACTGTCGACTGCAGCGCTGTATAGCTCTGGGCATGAAACAGGATTCTGTGCAGTGTGAGAGGAAGCCTGTTGAAGTGACCACCAGAGAGAAATCCGTCAACTGTGCAGCTTCCACTGAGAAAATCTACATCCGCAAAAACCTGTGTAGCCCTCTGGCTGCTACACCCACTTTTGTGTCTGACAAGGAAACTGCTAGGTCTACAAGTTTGCTTGAGTCAAGCATGTTGCTCAACATCCAACAGCCCTTCCCCAAGCTGGAAAACACCATCTTGATTCCAGCATCCCCTGACAAGGACGATCCATCCCAAGGTGACCTCGGCACGCTGGCAAATGTAGTGACGTCCCTCGCCCACCTCAACAAGGCCAGGGAGGCAAGTGACTGCAGCAATGATCTGATGGGAGATGAAACGCTTAGCAACGGGGACAGCTCGATGACGGACATCCAAGGAGATGAGCAAACTGCAAGTGATATCACTCGAGCTTTTGACACCCTGGCCAAAGTCCTGCACCCTGGTGATGGCTCAGCAGGAGAGTCCTTGGAGGCCACAATGCAGCTGATGTCAGGGGACCAGTCGGGTCCTGTGGTGGAGTTGGAGGGACCGATACTCTCTGACAGCCATATCCCTTTCAAGCTTATGATGCCTTTGCCTGTGCCAGAGTACCTCAATGTCAACTACATCTGTGAGTCAGCTTCCCGACTACTTTTTCTCTCTATGCACTGGGCACGCTCCATCCCTGCCTTTCAAACCCTTGGTGGTCAAGAAAATGACATTAACTTAATGAAAGCCTGCTGGAATGAGCTGTTTGCCCTGGGTCTGGCACAGTGCTCAAACGTCATGAACGTTGGTACCATCCTAAGTGCCATTATCAACCATCTGCAGACCAGCTTACAGGAAGATAAGCTGTCCCCAGATCGAGTGAAACTAGTAATGGAGCACATCTGGAGGATGCAGGAGTTCTGTAACGGCATGACCAAGCTGTCCCCAGACTCTTATGAATATGCCTACCTCAAAGCCATCGTTCTCTTTAGTCCTGATCACCCAGGCATAGATAATACTCCACAGATTGAGCGGTTTCAGGAGAAGGCCTACATGGAGCTGCAGGACTACGTAACCAGCACCTACCCAGAAGACTCCTATCGGTTATCCAAGCTGTTGCTGCGTCTTCCTGCCCTCCGGCTGATAAGTGCAGCTGTCACTGAGGAGCTGTTTTTCGCTGGGCTCATTGGCAATGTGCAGATCGACAGCATCATCCCTTACATCCTCAAAATGGAGTCCACCGATTATAATAGCCAGGCGGTCTCTGGGGTCTGACACACTGCCATTTGTAATTGCAACATTGGACTGTGAAAACTGGAcagccagccaatcagagtgCTCAACAGACCGATCACTAAGTGGtcacaacatactgtatttatgaCACAGCATTACGTTGCTCCTACTCCTCAGTAACCAGTCAGTAGAGCACAACTCACAAAgaggacaaaataaatcaactcCAGTGGCAAGTGAGCCTGCCAATATCTGCCCATTCAGGAACGAACCCTTGAAACCTGCATAGTAGATTGCGCTTTTTATTGTACAAAGTATTTTATGCTTCATCGCCTCCAGGCCTTTCCTTTTTCTGCAGATGTTGTTTCTACTTTGAAGGTATCAGGATGGTTTGTTTTTCACTGCTTTCCTACATGGTCATGCTTTTTAATTTTCTAATAAttatcaggaaaaaaaaaacttgtaataaTGTGAATTGATTTGTGAGACGTTATCGCAAAAGGTTATAACCTTTATTTCTTATTTGTTTGCTAATCCAAAGGATCGGGCACCATCATGaagttattgtgtgtgtatatagattTGTATATAGAATGCACCAAGAAGGCTAAATTGGGCAGCACTTGGTAATTCGTGAATTACATCTTTTGGACAAATTAATGTGGATGGAAAATGGTCGAGtcctttgaaaataaaaacacctttCAATCACATTTCTCTATCTACACAATTGATATTTCATTTTGATTAAATATCTGTAAAGAATGTG
>XM_039807912.1
GAGATTCAAGAACGAAACCCAACGAGACCAGTaacaggaagggagggagtgtTCAGTAGGTCTAACGTTACAGCAGGGAAGCAACCATTACCGGCTAGCCTAGCTCGTTAGCACTGTCGTCTGGAGCTCAGCGCTTACAAACTAAAGTTGGTGTGCATGCCTCATGGGGCACTGATGTGAAGAGCAGTTGAAGAAGGTGCGTGCATTATCAGAATGGATGGACAGACTCAAAGGATTCAACTTGTGTCAGCAGACAGCAACATGGCATTAGGACACAGAATCCAGATTGTAACTGATCAGCAGACTGGCCAGAAGATCCAGATTGTTACAGCACTTGAGCCATCCTCCCCTGGAAAGCAGCAGTTTATCCTAGCAAATGCTGACTATTCCTCTGGTGGGAAGGTGATCCTGGCCAAGCAGGAAGGCTCACCCAACAAGGTCATCCTCACCACTCCAGACGGCTCTGGGGTTAACCAGTTGTTGTTTGCCTCCCCTGATTTGGCTGGGCAGCAGATTCAGTTTGTGACTGAAGGGTCAGACCAGTCCATTGGGAAGCCAGTTGTGGAGTACTGCGTTGTCTGTGGGGACAAGGCCTCAGGCCGTCATTACGGAGCTGTTAGCTGTGAGGGCTGTAAGGGCTTCTTCAAACGCAGTATTAGAAAGAACCTAGTGTACACGTGCAGGGGCTCCGGAGAGTGTGCCATCAACAAGCTCCACCGAAACCGCTGCCAGTACTGTCGACTGCAGCGCTGTATAGCTCTGGGCATGAAACAGGATTCTGTGCAGTGTGAGAGGAAGCCTGTTGAAGTGACCACCAGAGAGAAATCCGTCAACTGTGCAGCTTCCACTGAGAAAATCTACATCCGCAAAAACCTGTGTAGCCCTCTGGCTGCTACACCCACTTTTGTGTCTGACAAGGAAACTGCTAGGTCTACAAGTTTGCTTGAGTCAAGCATGTTGCTCAACATCCAACAGCCCTTCCCCAAGCTGGAAAACACCATCTTGATTCCAGCATCCCCTGACAAGGACGATCCATCCCAAGGTGACCTCGGCACGCTGGCAAATGTAGTGACGTCCCTCGCCCACCTCAACAAGGCCAGGGAGGCAAGTGACTGCAGCAATGATCTGATGGGAGATGAAACGCTTAGCAACGGGGACAGCTCGATGACGGACATCCAAGGAGATGAGCAAACTGCAAGTGATATCACTCGAGCTTTTGACACCCTGGCCAAAGTCCTGCACCCTGGTGATGGCTCAGCAGGAGAGTCCTTGGAGGCCACAATGCAGCTGATGTCAGGGGACCAGTCGGGTCCTGTGGTGGAGTTGGAGGGACCGATACTCTCTGACAGCCATATCCCTTTCAAGCTTATGATGCCTTTGCCTGTGCCAGAGTACCTCAATGTCAACTACATCTGTGAGTCAGCTTCCCGACTACTTTTTCTCTCTATGCACTGGGCACGCTCCATCCCTGCCTTTCAAACCCTTGGTGGTCAAGAAAATGACATTAACTTAATGAAAGCCTGCTGGAATGAGCTGTTTGCCCTGGGTCTGGCACAGTGCTCAAACGTCATGAACGTTGGTACCATCCTAAGTGCCATTATCAACCATCTGCAGACCAGCTTACAGGAAGATAAGCTGTCCCCAGATCGAGTGAAACTAGTAATGGAGCACATCTGGAGGATGCAGGAGTTCTGTAACGGCATGACCAAGCTGTCCCCAGACTCTTATGAATATGCCTACCTCAAAGCCATCGTTCTCTTTAGTCCTGATCACCCAGGCATAGATAATACTCCACAGATTGAGCGGTTTCAGGAGAAGGCCTACATGGAGCTGCAGGACTACGTAACCAGCACCTACCCAGAAGACTCCTATCGGTTATCCAAGCTGTTGCTGCGTCTTCCTGCCCTCCGGCTGATAAGTGCAGCTGTCACTGAGGAGCTGTTTTTCGCTGGGCTCATTGGCAATGTGCAGATCGACAGCATCATCCCTTACATCCTCAAAATGGAGTCCACCGATTATAATAGCCAGGCGGTCTCTGGGGTCTGACACACTGCCATTTGTAATTGCAACATTGGACTGTGAAAACTGGAcagccagccaatcagagtgCTCAACAGACCGATCACTAAGTGGtcacaacatactgtatttatgaCACAGCATTACGTTGCTCCTACTCCTCAGTAACCAGTCAGTAGAGCACAACTCACAAAgaggacaaaataaatcaactcCAGTGGCAAGTGAGCCTGCCAATATCTGCCCATTCAGGAACGAACCCTTGAAACCTGCATAGTAGATTGCGCTTTTTATTGTACAAAGTATTTTATGCTTCATCGCCTCCAGGCCTTTCCTTTTTCTGCAGATGTTGTTTCTACTTTGAAGGTATCAGGATGGTTTGTTTTTCACTGCTTTCCTACATGGTCATGCTTTTTAATTTTCTAATAAttatcaggaaaaaaaaaacttgtaataaTGTGAATTGATTTGTGAGACGTTATCGCAAAAGGTTATAACCTTTATTTCTTATTTGTTTGCTAATCCAAAGGATCGGGCACCATCATGaagttattgtgtgtgtatatagattTGTATATAGAATGCACCAAGAAGGCTAAATTGGGCAGCACTTGGTAATTCGTGAATTACATCTTTTGGACAAATTAATGTGGATGGAAAATGGTCGAGtcctttgaaaataaaaacacctttCAATCACATTTCTCTATCTACACAATTGATATTTCATTTTGATTAAATATCTGTAAAGAATGTG
>XM_039807913.1
CGAAACCCAACGAGACCAGTaacaggaagggagggagtgtTCAGTAGGTCTAACGTTACAGCAGGGAAGCAACCATTACCGGCTAGCCTAGCTCGTTAGCACTGTCGTCTGGAGCTCAGCGCTTACAAACTAAAGTTGGCAAGTGTGCATGCCTCATGGGGCACTGATGTGAAGAGCAGTTGAAGAAGGTGCGTGCATTATCAGAATGGATGGACAGACTCAAAGGATTCAACTTGTGTCAGCAGACAGCAACATGGCATTAGGACACAGAATCCAGATTGTAACTGATCAGCAGACTGGCCAGAAGATCCAGATTGTTACAGCACTTGAGCCATCCTCCCCTGGAAAGCAGCAGTTTATCCTAGCAAATGCTGACTATTCCTCTGGTGGGAAGGTGATCCTGGCCAAGCAGGAAGGCTCACCCAACAAGGTCATCCTCACCACTCCAGACGGCTCTGGGGTTAACCAGTTGTTGTTTGCCTCCCCTGATTTGGCTGGGCAGCAGATTCAGTTTGTGACTGAAGGGTCAGACCAGTCCATTGGGAAGCCAGTTGTGGAGTACTGCGTTGTCTGTGGGGACAAGGCCTCAGGCCGTCATTACGGAGCTGTTAGCTGTGAGGGCTGTAAGGGCTTCTTCAAACGCAGTATTAGAAAGAACCTAGTGTACACGTGCAGGGGCTCCGGAGAGTGTGCCATCAACAAGCTCCACCGAAACCGCTGCCAGTACTGTCGACTGCAGCGCTGTATAGCTCTGGGCATGAAACAGGATTCTGTGCAGTGTGAGAGGAAGCCTGTTGAAGTGACCACCAGAGAGAAATCCGTCAACTGTGCAGCTTCCACTGAGAAAATCTACATCCGCAAAAACCTGTGTAGCCCTCTGGCTGCTACACCCACTTTTGTGTCTGACAAGGAAACTGCTAGGTCTACAAGTTTGCTTGAGTCAAGCATGTTGCTCAACATCCAACAGCCCTTCCCCAAGCTGGAAAACACCATCTTGATTCCAGCATCCCCTGACAAGGACGATCCATCCCAAGGTGACCTCGGCACGCTGGCAAATGTAGTGACGTCCCTCGCCCACCTCAACAAGGCCAGGGAGGCAAGTGACTGCAGCAATGATCTGATGGGAGATGAAACGCTTAGCAACGGGGACAGCTCGATGACGGACATCCAAGGAGATGAGCAAACTGCAAGTGATATCACTCGAGCTTTTGACACCCTGGCCAAAGTCCTGCACCCTGGTGATGGCTCAGCAGGAGAGTCCTTGGAGGCCACAATGCAGCTGATGTCAGGGGACCAGTCGGGTCCTGTGGTGGAGTTGGAGGGACCGATACTCTCTGACAGCCATATCCCTTTCAAGCTTATGATGCCTTTGCCTGTGCCAGAGTACCTCAATGTCAACTACATCTGTGAGTCAGCTTCCCGACTACTTTTTCTCTCTATGCACTGGGCACGCTCCATCCCTGCCTTTCAAACCCTTGGTGGTCAAGAAAATGACATTAACTTAATGAAAGCCTGCTGGAATGAGCTGTTTGCCCTGGGTCTGGCACAGTGCTCAAACGTCATGAACGTTGGTACCATCCTAAGTGCCATTATCAACCATCTGCAGACCAGCTTACAGGAAGATAAGCTGTCCCCAGATCGAGTGAAACTAGTAATGGAGCACATCTGGAGGATGCAGGAGTTCTGTAACGGCATGACCAAGCTGTCCCCAGACTCTTATGAATATGCCTACCTCAAAGCCATCGTTCTCTTTAGTCCTGATCACCCAGGCATAGATAATACTCCACAGATTGAGCGGTTTCAGGAGAAGGCCTACATGGAGCTGCAGGACTACGTAACCAGCACCTACCCAGAAGACTCCTATCGGTTATCCAAGCTGTTGCTGCGTCTTCCTGCCCTCCGGCTGATAAGTGCAGCTGTCACTGAGGAGCTGTTTTTCGCTGGGCTCATTGGCAATGTGCAGATCGACAGCATCATCCCTTACATCCTCAAAATGGAGTCCACCGATTATAATAGCCAGGCGGTCTCTGGGGTCTGACACACTGCCATTTGTAATTGCAACATTGGACTGTGAAAACTGGAcagccagccaatcagagtgCTCAACAGACCGATCACTAAGTGGtcacaacatactgtatttatgaCACAGCATTACGTTGCTCCTACTCCTCAGTAACCAGTCAGTAGAGCACAACTCACAAAgaggacaaaataaatcaactcCAGTGGCAAGTGAGCCTGCCAATATCTGCCCATTCAGGAACGAACCCTTGAAACCTGCATAGTAGATTGCGCTTTTTATTGTACAAAGTATTTTATGCTTCATCGCCTCCAGGCCTTTCCTTTTTCTGCAGATGTTGTTTCTACTTTGAAGGTATCAGGATGGTTTGTTTTTCACTGCTTTCCTACATGGTCATGCTTTTTAATTTTCTAATAAttatcaggaaaaaaaaaacttgtaataaTGTGAATTGATTTGTGAGACGTTATCGCAAAAGGTTATAACCTTTATTTCTTATTTGTTTGCTAATCCAAAGGATCGGGCACCATCATGaagttattgtgtgtgtatatagattTGTATATAGAATGCACCAAGAAGGCTAAATTGGGCAGCACTTGGTAATTCGTGAATTACATCTTTTGGACAAATTAATGTGGATGGAAAATGGTCGAGtcctttgaaaataaaaacacctttCAATCACATTTCTCTATCTACACAATTGATATTTCATTTTGATTAAATATCTGTAAAGAATGTG

Function

symbol description
nr2c1 Predicted to enable RNA polymerase II cis-regulatory region sequence-specific DNA binding activity and nuclear receptor activity. Predicted to be involved in anatomical structure development; cell differentiation; and negative regulation of transcription by RNA polymerase II. Predicted to act upstream of or within regulation of transcription, DNA-templated. Predicted to be located in nucleus. Orthologous to human NR2C1 (nuclear receptor subfamily 2 group C member 1).

NR:

description
PREDICTED: nuclear receptor subfamily 2 group C member 1 isoform X2

GO: NA

KEGG:

id description
K08543 NR2C1, TR2; testicular receptor 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039807911.1 False 2759 mRNA 0.47 14 20850776 20858938
XM_039807912.1 True 2776 mRNA 0.47 14 20850776 20858774
XM_039807913.1 False 2768 mRNA 0.48 14 20850776 20858762

Neighbor

gene id symbol gene type direction distance location
LOC120563622 LOC103358318,LOC104940631 coding downstream 2049 20836690 ~ 20848727 (-)
LOC120564151 flnc,LOC103358317,LOC102787912,LOC102305697,LOC102200922 coding downstream 46901 20780707 ~ 20803875 (-)
kcnd2 LOC104940628,LOC101467844,LOC102200463,LOC102788385,LOC100700816,LOC103358316 coding downstream 88587 20727141 ~ 20762189 (-)
hsp90b1 hsp90b1,LOC102789166 coding downstream 142581 20687065 ~ 20708195 (-)
hbp1 hbp1,LOC108230206 coding downstream 164089 20675436 ~ 20686687 (-)
LOC120563620 NA coding upstream 482 20859420 ~ 20877134 (-)
LOC120563851 LOC104963714,LOC103358322 coding upstream 35866 20894804 ~ 20904815 (-)
hal hal,LOC102785645 coding upstream 60292 20919230 ~ 20931076 (-)
LOC120564353 cdk17,LOC106573057 coding upstream 82016 20940954 ~ 20973166 (-)
camk1db LOC104963721,LOC101175563,LOC105938601,LOC102229393,LOC106946080 coding upstream 123616 20982554 ~ 21002394 (-)
G86761 NA non-coding downstream 151139 20698815 ~ 20699637 (-)
G86686 NA non-coding downstream 388953 20402744 ~ 20461823 (-)
G86660 NA non-coding downstream 586570 20250890 ~ 20264206 (-)
G86652 reln non-coding downstream 608926 20241433 ~ 20241850 (-)
G86605 NA non-coding downstream 834964 20014338 ~ 20015812 (-)
G86853 NA non-coding upstream 49451 20908389 ~ 20908590 (-)
G86976 NA non-coding upstream 243692 21102630 ~ 21103379 (-)
LOC120563411 NA non-coding upstream 281569 21140507 ~ 21146513 (-)
G87030 LOC103366871,LOC104946806,LOC106525492,LOC108230167 non-coding upstream 386072 21245010 ~ 21251759 (-)
G87107 nrcam,LOC101067328 non-coding upstream 603767 21462705 ~ 21466246 (-)
LOC120564033 LOC103358331,LOC102195670 other downstream 21541 20806882 ~ 20829235 (-)
G86638 NA other downstream 591517 20252639 ~ 20259259 (-)
cep152 cep152,LOC104960117 other downstream 1277088 19557452 ~ 19573688 (-)
G86402 LOC103363837 other downstream 1462201 19387822 ~ 19388575 (-)
arpp19b arpp19,LOC100693429,LOC102791975,LOC106919339,LOC101065895 other downstream 1533298 19315385 ~ 19317478 (-)
LOC120563850 NA other upstream 18730 20877668 ~ 20887626 (-)
dnajb9a dnajb9,LOC100706374,LOC102775779,LOC102215328 other upstream 510593 21369531 ~ 21372509 (-)
G87140 NA other upstream 854104 21713042 ~ 21713554 (-)
LOC120564778 LOC103358851,LOC101480430,LOC100706913,LOC102797593 other upstream 876068 21735006 ~ 21739344 (-)
LOC120564428 NA other upstream 1488232 22347170 ~ 22366978 (-)

Expression


Co-expression Network