LOC120563723


Basic Information

Item Value
gene id LOC120563723
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 17566241 ~ 17572209 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039808084.1
CCATCCTCCTCTTCGTGCATCTTTCCTCGAAGTTTCTTCTTCGTGCAGCGCAGCGGATGCCCACTCCTGTTTCCATCCGCATGACAGCCTGCCTCTTGGAGAGGGGGAGCATGGGAGATGTAGTGTATTTCAACGTGTCATACTCCCTCAGAACACCTTCGGTTGGATGTTACAGACTGTTCAGAAGTTGAGAGAAGCATTTGAAAGTTTGCTGAAATGACACCAGGTTCAAACTGCACACGCTTAAGGAAAGGGATTGAAAGAAATTGCTGTGTACGGTACAAACAACAGAAATCCAGATCAGGGTCAGTGACAAAGGATCCCAGACCTAGAAAATCCCCCTGCCTCAGGACCTGTCTGACGTTTTGCTTTAAGGACCAGGCAAGGATGGAGCAAAGGGAGTCACCAGTGGATTCTCATGTTGAGGGGACTGAAGGAAGATTCAGGGAATTGGCTTCAAAGTGGTTCATAGAGACTCAAGTTCCACTCATCGTCCACAACGGCTTCTTCCCCACTTGGTTCCTGGGCTTCATCACAAGAAAGGAGGGTGAAGAAATACTCAGAGAAAAGGAGCTGGGCTGTTTCCTGATCCGTCTCAGTGATAAGGCCATCGGATACATACTGTCTTATAAAGGCAGGGATCGGTGTCGACATTTCGTGATAAACCAAAGTGAATCAGGGCAGTTTTTCGTTTGTGGAGACACTAAAGGGCACGACTCTGTCTCTGATCTCATAGAATACTACAAGACTAGCTCCATTCAGCCGTTTGGAGAGTACCTGACATCTTCGTGTTTTGAGGCACTGGATAAAGAGCTGTATGATACCATCCAGGTTAGCCCTAAAGAAAAGCCTGTGGTCTGTGAAGCTGTGAAGAACATACGAAAACCACAGATGAAATCGGCCTCAGTGCAGCCGCCTGCACGACCACCAAAGAGCAACAGGACACTAGAGGAAGTACCACCTTTGCCTCGGAGGAGCAGGCACCTTGATAGTGGCCCCGTAAATGACATTTTGTATGCTCAGCTCAGGAAGCAAATACCTAGGGAGACACCGAGATCCCGACACATCTGTCAGGACAATTTCCCTGGCAATAATCCAAGGAGAGCTGGAAGATCCCCAACCCAGGATCAGAGCAGGTGTAGTCCTCCAGCTGGACCACAGTCTGTATATTGTGAGCTCGGTCTGTTGGACACCAAGAGCAGATCTCTAACGCTTCTGGACGACAGCTCTGATGGAGAGCAGTCTTACAGGCTGAGTGCATCCCCTCACACGCCACCGAGACTTTCCCCCAGGCCGGTCAGACAAGCCAATTACTTTGGCCCGGCGCCAGAGAGGACAGACTCGTGCAGCAGAGCCAGCAGCTGCAACAGCCTGGAAAACATGAGTGACAGCGCTGTCTATCACCTGGCTGGCAGGCCTGGTAGCCCACACACTACACCCTCTGGGGCCAGGTCATCGGCAACAGAGCAGCACAGTGGTTCAGTGTATGCTGAGGTCCCCATTGAAGCCGGCGTTGGCCGCTTCCCTCATGACAATACATATGAGCTGATTCCTGGCCACGAGAACACACCTCAACCCAACAGCAACACTTATGAGCCTCTGGAGGACATCAGGCCCAAACATAACCCCTCTTCCTGGGGGTTGAAGAACGATAAATGGAAATGGCTGTTTCCTGAGGCCAAGAGGAAATGGTGAAAAGGTTACCTTACCAGCTGCTGATGAAAAAGTTCACTAATTTTACTCTGACACTACAGTGGCTGCCTAATATACAGAACACTCTGTGAAAGCTTCTTTTACATATTCAACATTACCTTACATGTTCATAGCTATTCAAATGACATCttctgtattttttctttttaatgtatttatttaaaaatgattatgcatttacatttaaata
>XM_039808085.1
TCCTCCTCTTCGTGCATCTTTCCTCGAAGTTTCTTCTTCGTGCAGCGCAGCGGATGCCCACTCCTGTTTCCATCCGCATGACAGCCTGCCTCTTGGAGAGGGGGAGCATGGGAGATTGTCATACTCCCTCAGAACACCTTCGGTTGGATGTTACAGACTGTTCAGAAGTTGAGAGAAGCATTTGAAAGTTTGCTGAAATGACACCAGGTTCAAACTGCACACGCTTAAGGAAAGGGATTGAAAGAAATTGCTGTGTACGGTACAAACAACAGAAATCCAGATCAGGGTCAGTGACAAAGGATCCCAGACCTAGAAAATCCCCCTGCCTCAGGACCTGTCTGACGTTTTGCTTTAAGGACCAGGCAAGGATGGAGCAAAGGGAGTCACCAGTGGATTCTCATGTTGAGGGGACTGAAGGAAGATTCAGGGAATTGGCTTCAAAGTGGTTCATAGAGACTCAAGTTCCACTCATCGTCCACAACGGCTTCTTCCCCACTTGGTTCCTGGGCTTCATCACAAGAAAGGAGGGTGAAGAAATACTCAGAGAAAAGGAGCTGGGCTGTTTCCTGATCCGTCTCAGTGATAAGGCCATCGGATACATACTGTCTTATAAAGGCAGGGATCGGTGTCGACATTTCGTGATAAACCAAAGTGAATCAGGGCAGTTTTTCGTTTGTGGAGACACTAAAGGGCACGACTCTGTCTCTGATCTCATAGAATACTACAAGACTAGCTCCATTCAGCCGTTTGGAGAGTACCTGACATCTTCGTGTTTTGAGGCACTGGATAAAGAGCTGTATGATACCATCCAGGTTAGCCCTAAAGAAAAGCCTGTGGTCTGTGAAGCTGTGAAGAACATACGAAAACCACAGATGAAATCGGCCTCAGTGCAGCCGCCTGCACGACCACCAAAGAGCAACAGGACACTAGAGGAAGTACCACCTTTGCCTCGGAGGAGCAGGCACCTTGATAGTGGCCCCGTAAATGACATTTTGTATGCTCAGCTCAGGAAGCAAATACCTAGGGAGACACCGAGATCCCGACACATCTGTCAGGACAATTTCCCTGGCAATAATCCAAGGAGAGCTGGAAGATCCCCAACCCAGGATCAGAGCAGGTGTAGTCCTCCAGCTGGACCACAGTCTGTATATTGTGAGCTCGGTCTGTTGGACACCAAGAGCAGATCTCTAACGCTTCTGGACGACAGCTCTGATGGAGAGCAGTCTTACAGGCTGAGTGCATCCCCTCACACGCCACCGAGACTTTCCCCCAGGCCGGTCAGACAAGCCAATTACTTTGGCCCGGCGCCAGAGAGGACAGACTCGTGCAGCAGAGCCAGCAGCTGCAACAGCCTGGAAAACATGAGTGACAGCGCTGTCTATCACCTGGCTGGCAGGCCTGGTAGCCCACACACTACACCCTCTGGGGCCAGGTCATCGGCAACAGAGCAGCACAGTGGTTCAGTGTATGCTGAGGTCCCCATTGAAGCCGGCGTTGGCCGCTTCCCTCATGACAATACATATGAGCTGATTCCTGGCCACGAGAACACACCTCAACCCAACAGCAACACTTATGAGCCTCTGGAGGACATCAGGCCCAAACATAACCCCTCTTCCTGGGGGTTGAAGAACGATAAATGGAAATGGCTGTTTCCTGAGGCCAAGAGGAAATGGTGAAAAGGTTACCTTACCAGCTGCTGATGAAAAAGTTCACTAATTTTACTCTGACACTACAGTGGCTGCCTAATATACAGAACACTCTGTGAAAGCTTCTTTTACATATTCAACATTACCTTACATGTTCATAGCTATTCAAATGACATCttctgtattttttctttttaatgtatttatttaaaaatgattatgcatttacatttaaata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039808084.1 True 1903 mRNA 0.49 9 17566241 17572209
XM_039808085.1 False 1884 mRNA 0.49 9 17566241 17572206

Neighbor

gene id symbol gene type direction distance location
lrrc61 lrrc61 coding downstream 11299 17551333 ~ 17554942 (-)
idh3a idh3a,LOC103353692,LOC100691871 coding downstream 16022 17545345 ~ 17550219 (-)
dnaja dnaja4,LOC108229883,LOC107099226,LOC106514380 coding downstream 28395 17534304 ~ 17537846 (-)
LOC120564505 rab8b,LOC103379973 coding downstream 35613 17527783 ~ 17530628 (-)
klf13 klf13,znf746 coding downstream 78667 17475744 ~ 17487574 (-)
LOC120563319 LOC102079624,LOC102777822,LOC103353701 coding upstream 36891 17609100 ~ 17617514 (-)
usp3 usp3 coding upstream 70636 17642845 ~ 17656358 (-)
si:dkeyp-73b11.8 NA coding upstream 88072 17660281 ~ 17664363 (-)
neil1 neil1 coding upstream 119214 17691423 ~ 17695346 (-)
commd4 commd4 coding upstream 123255 17695464 ~ 17698567 (-)
G85613 acsbg1,LOC102779547 non-coding downstream 21836 17544155 ~ 17544405 (-)
G85601 LOC101478969,LOC102214964,LOC102308915,LOC100701437,LOC102780768 non-coding downstream 49074 17515903 ~ 17517167 (-)
LOC120563415 NA non-coding downstream 470478 17090105 ~ 17095763 (-)
G85481 etfa non-coding downstream 644099 16920449 ~ 16922142 (-)
G85462 scaper,LOC102788151 non-coding downstream 663920 16901164 ~ 16902321 (-)
G85660 NA non-coding upstream 84936 17657145 ~ 17657371 (-)
G85711 NA non-coding upstream 169483 17741692 ~ 17742006 (-)
G85799 NA non-coding upstream 257299 17829508 ~ 17834884 (-)
G85802 arih1,LOC107662282,LOC107591299 non-coding upstream 269891 17842100 ~ 17845786 (-)
G85806 NA non-coding upstream 316658 17888867 ~ 17892467 (-)
G85435 NA other downstream 757825 16808056 ~ 16808416 (-)
trnah-gug_10 NA other downstream 801455 16764715 ~ 16764786 (-)
LOC120563869 frmd5,LOC104917831,LOC102299895,LOC106561170 other downstream 802523 16697095 ~ 16763718 (-)
G85321 NA other downstream 1125276 16439374 ~ 16440965 (-)
st8sia2 fam174b,st8sia2,LOC100690985,LOC101474125,LOC102798331 other downstream 1357055 16188853 ~ 16209186 (-)
fbxl22 fbxl22 other upstream 53802 17626011 ~ 17645520 (-)
ppcdc ppcdc other upstream 289504 17861713 ~ 17877065 (-)
dennd4a dennd4a other upstream 321644 17893853 ~ 17956629 (-)
trnaq-cug_6 NA other upstream 354838 17927047 ~ 17927118 (-)
G85813 rpl4 other upstream 458799 18031008 ~ 18036276 (-)

Expression


Co-expression Network