commd4 (commd4)


Basic Information

Item Value
gene id commd4
gene name commd4
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 17695464 ~ 17698567 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039808128.1
AACTGCAAAAGGGCGTTTCATTTTTCCCTCGTCCAATCAGATGTGAGGAAGCAGAAAGTACGGTAGTTCCTGTGTTCAGTTCTTCCGTGTGTAGCTGGTCAGCTGACTGACAGCCATGCGATTCCGTTTCTGTGGAGATTTGGACTGCCCAGACTGGGTACTTGCCGAAATCAGCACATTAGCGAAGCTTTCAAGTGTCAAAATGAAACTCCTTTGTGCTCAAGTGCTCAAGGATTTGCTCGGGGATGGCATTGATTATGACAAGGTTACAAAGCTAACTGCAGATGCAAAGTTTGAGAGCGGAGACATCAAAGCTAGTGTGGCAGTGCTCAGCTTCATTTTCTCCAGTGCAGCGAAGCATGATGTTGACAGCGAATCTCTGTCCAGTGAGCTGCAGCAGCTCGGTCTGCCTAAAGAACACACAACGGGGCTCTGCAAATCATATGAAGACAAGCACTCAGCACTGCAAGGCAAACTAAGAGAGACAAGCCTGAGATTGGGCCGACTGGAGGCTGCGTCATGGCGCATTGACTACACTCTGAGCTCCAGTGAGCTGAGGGAAGTGAATGAACCAATAATTCAGCTTAAACTGCAGACACAAGGAGCAGAGTCGGGTTCCACAGAGACGActgttgtttctgtttctgctgACAAGTTCAGAGTCTTGCTTGCAGAGCTCAAACAAGCCCAGACTAGGATGAATGCACTACAATGAGGATGATCACAAGCCGAAAAGAAATGATGCCGATAAGGCTACCAAAAGAGCCAGACTTACATCTTGTACAGtacaatttttttatatttagtcaTCTCAAAGGTCATGTGAATGACTTAGTCCTAATTTGTTATGACTGATATTTAGTAGTATTTTTCTACCACATTAGTAATAATTGGTAGAAATATTTCCAGACTGAACAAGAATACTGAATGGaccatttttgtaaaatattgtatattgattattgaacatttttatttaaatgatgtTCATAATTTGTGTTTTACTTAATAAAGTTCATACTAAATTACAATAAAA

Function

symbol description
commd4 Orthologous to human COMMD4 (COMM domain containing 4).

NR:

description
COMM domain-containing protein 4-like isoform X1

GO: NA

KEGG:

id description
K22560 COMMD4; COMM domain containing 4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039808128.1 True 1036 mRNA 0.42 8 17695464 17698567

Neighbor

gene id symbol gene type direction distance location
neil1 neil1 coding downstream 118 17691423 ~ 17695346 (-)
si:dkeyp-73b11.8 NA coding downstream 31101 17660281 ~ 17664363 (-)
usp3 usp3 coding downstream 39106 17642845 ~ 17656358 (-)
LOC120563319 LOC102079624,LOC102777822,LOC103353701 coding downstream 77950 17609100 ~ 17617514 (-)
LOC120563723 NA coding downstream 123255 17566241 ~ 17572209 (-)
stra6 stra6,LOC102799117 coding upstream 25625 17724192 ~ 17741305 (-)
LOC120563763 LOC100692956,LOC102798821 coding upstream 94080 17792647 ~ 17795907 (-)
stoml1 stoml1 coding upstream 97468 17796035 ~ 17799387 (-)
nr2e3 nr2e3 coding upstream 102136 17800703 ~ 17803827 (-)
hexa hexa,LOC102299697,LOC102797931 coding upstream 112984 17811551 ~ 17818935 (-)
G85660 NA non-coding downstream 38093 17657145 ~ 17657371 (-)
G85613 acsbg1,LOC102779547 non-coding downstream 151059 17544155 ~ 17544405 (-)
G85601 LOC101478969,LOC102214964,LOC102308915,LOC100701437,LOC102780768 non-coding downstream 178297 17515903 ~ 17517167 (-)
LOC120563415 NA non-coding downstream 599701 17090105 ~ 17095763 (-)
G85481 etfa non-coding downstream 773322 16920449 ~ 16922142 (-)
G85711 NA non-coding upstream 43125 17741692 ~ 17742006 (-)
G85799 NA non-coding upstream 130941 17829508 ~ 17834884 (-)
G85802 arih1,LOC107662282,LOC107591299 non-coding upstream 143533 17842100 ~ 17845786 (-)
G85806 NA non-coding upstream 190300 17888867 ~ 17892467 (-)
G85815 NA non-coding upstream 317540 18016107 ~ 18016774 (-)
fbxl22 fbxl22 other downstream 49944 17626011 ~ 17645520 (-)
G85435 NA other downstream 887048 16808056 ~ 16808416 (-)
trnah-gug_10 NA other downstream 930678 16764715 ~ 16764786 (-)
LOC120563869 frmd5,LOC104917831,LOC102299895,LOC106561170 other downstream 931746 16697095 ~ 16763718 (-)
G85321 NA other downstream 1254499 16439374 ~ 16440965 (-)
ppcdc ppcdc other upstream 163146 17861713 ~ 17877065 (-)
dennd4a dennd4a other upstream 195286 17893853 ~ 17956629 (-)
trnaq-cug_6 NA other upstream 228480 17927047 ~ 17927118 (-)
G85813 rpl4 other upstream 332441 18031008 ~ 18036276 (-)
lctlb lctl,LOC104967861,LOC107388717,LOC106956364 other upstream 343061 18041628 ~ 18047840 (-)

Expression


Co-expression Network