stoml1 (stoml1)


Basic Information

Item Value
gene id stoml1
gene name stoml1
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 17796035 ~ 17799387 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039808169.1
ATGAGCCGTCAGTAAACATAGAGAAGAAGAACTGGACCGAAAACACGGAAGAACGCTAGCTAGTTAGCATAATGCTATGACATAATGCATGAGATAGAGCGTCCTgcatttaacaacaacaacaacaactgcagCGGAGACTGATTAATATGAAGTCGCTTCAAATAAGAAATAACAGTTGTTTTACCTAACAATGTTTAGCAAGTCGTATCAGCCGCTCCCTCAGAGGGAGTCCACTTGTCCGAGGACTCCTGGCTTGTTCGTTGACACTGACAGCTTCACACAGCGCGGCTACCACAAAGGGTTTTCATTTGACAACATCCCCAATGTCTCTGAAAACAACTTCACTGATACCTCCCAAGGATTGCTGTCCTGGATGTGCAACCTGATTGTCATCTTCCTCGTCTACATCGGCACCTTTATAACATTTCCTATAACAGGATGGTTTGTACTGAAAGCGGTGCCTAACTACCAGAGAATAGTAGTGTTTCGTCTGGGTCGAGTTGGTCCTCCAAAGGGTCCGGGTATTGTCCTTGTCCTGCCACTCATTGACCAGTGGCAGAGAGTAGACCTGCGCACCCGTGCTTTCAACATCCCTCCTTGCCAGGTGACTACTCTGGATGGCGGGGTGTTGTCAGTGGGAGCAGACATTCAGTTCAGGATCTGGAGCCCCGTCATGTCAGTACTATCAGTCCAGGACCTGAACGCCTCAACCAGGATGACTGCACAGAAGGCTTTGACCTACAGCCTTGCCAAAAAGACTTTCAAGGAGATCCAAACTGAGAGAGTTAAACTTGGAGAATATCTTGGGATGGACATAAATGAGATGACTCGTCCCTGGGGGCTGGAAGTGGACAGGGTAGAGCTTACCCTGGGATCTCTACTAAAAGCACCAGAGGGAGGCCCCTCTGGACCCCTCATCATGCCTCCATCTGTGCCTGGACTGGAAGGCCTCACAGGCCTCACTGGCCCCATTCAGCAGTTGGCCATGCACTTTCTGGGCCAAAGTGGCATTTCACAGCCTCAACAAGGTGACAGCATTACCTTTACAGATGAGCTCAGCAGTGCCCCTCAGGCAGCTGTGGCCACACCAGGTTCTGTTGAAGAACTGCTTGGTGGGGTCAGGCTCCTGCTCTCTGAAACTTTGGTCCACCAGATTGGGGCCTGCTTCCAGTTTGACATAAGCTCGGAACACGGACAGCATCATAGTTACTACGTGGATTTGAGCCAAGGTAGCGGTGCAGCTGGAGCAGGGTCCTTGTGCGGAGAACCAGATGTGACACTGAGTATGAGTGACAGCGACCTTCTGGCCATGTTCCAGGGCAGGCTTCAACCATTTGCTGCTTACACCAGTGGCAGACTCACAATCCAGGGAGACATTAAGACTGCCATGAAGCTGGAAGAACTCTTAAAGCTACTTAAGAAATAGCGTTCATAGTAGCATTTGTGTACCTATTTATTGAATGTTTAAgtttaaatgtacagtacattctTTTAAAGTATACATTAATTACATTTGTCATGAACTGAG

Function

symbol description
stoml1 Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Orthologous to human STOML1 (stomatin like 1).

NR:

description
stomatin-like protein 1

GO:

id name namespace
GO:0016020 membrane cellular_component
GO:0032934 sterol binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039808169.1 True 1531 mRNA 0.48 7 17796035 17799387

Neighbor

gene id symbol gene type direction distance location
LOC120563763 LOC100692956,LOC102798821 coding downstream 128 17792647 ~ 17795907 (-)
stra6 stra6,LOC102799117 coding downstream 54730 17724192 ~ 17741305 (-)
commd4 commd4 coding downstream 97468 17695464 ~ 17698567 (-)
neil1 neil1 coding downstream 100689 17691423 ~ 17695346 (-)
si:dkeyp-73b11.8 NA coding downstream 131672 17660281 ~ 17664363 (-)
nr2e3 nr2e3 coding upstream 1316 17800703 ~ 17803827 (-)
hexa hexa,LOC102299697,LOC102797931 coding upstream 12164 17811551 ~ 17818935 (-)
c8h15orf39 NA coding upstream 46843 17846230 ~ 17856728 (-)
ints14 vwa9,LOC102797047 coding upstream 82021 17881408 ~ 17886727 (-)
megf11 megf11,LOC103353722,LOC102795465 coding upstream 132818 17932205 ~ 18006530 (-)
G85711 NA non-coding downstream 54029 17741692 ~ 17742006 (-)
G85660 NA non-coding downstream 138664 17657145 ~ 17657371 (-)
G85613 acsbg1,LOC102779547 non-coding downstream 251630 17544155 ~ 17544405 (-)
G85601 LOC101478969,LOC102214964,LOC102308915,LOC100701437,LOC102780768 non-coding downstream 278868 17515903 ~ 17517167 (-)
LOC120563415 NA non-coding downstream 700272 17090105 ~ 17095763 (-)
G85799 NA non-coding upstream 30121 17829508 ~ 17834884 (-)
G85802 arih1,LOC107662282,LOC107591299 non-coding upstream 42713 17842100 ~ 17845786 (-)
G85806 NA non-coding upstream 89480 17888867 ~ 17892467 (-)
G85815 NA non-coding upstream 216720 18016107 ~ 18016774 (-)
G85910 LOC103141279,LOC103380252,LOC107097849,LOC106536919,LOC102790651 non-coding upstream 544155 18343542 ~ 18344341 (-)
fbxl22 fbxl22 other downstream 150515 17626011 ~ 17645520 (-)
G85435 NA other downstream 987619 16808056 ~ 16808416 (-)
trnah-gug_10 NA other downstream 1031249 16764715 ~ 16764786 (-)
LOC120563869 frmd5,LOC104917831,LOC102299895,LOC106561170 other downstream 1032317 16697095 ~ 16763718 (-)
G85321 NA other downstream 1355070 16439374 ~ 16440965 (-)
ppcdc ppcdc other upstream 62326 17861713 ~ 17877065 (-)
dennd4a dennd4a other upstream 94466 17893853 ~ 17956629 (-)
trnaq-cug_6 NA other upstream 127660 17927047 ~ 17927118 (-)
G85813 rpl4 other upstream 231621 18031008 ~ 18036276 (-)
lctlb lctl,LOC104967861,LOC107388717,LOC106956364 other upstream 242241 18041628 ~ 18047840 (-)

Expression


Co-expression Network