c8h15orf39


Basic Information

Item Value
gene id c8h15orf39
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 17846230 ~ 17856728 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039808170.1
AGAAAGTGACAAACGGGAAAACGTGTAGAAAACAAGCCGTGGATAGAGAGAGGGCGTGACTCCGCCTATTGATCAAACACCATCCTCCTcccttttgtcttttcttcaGTTTGTTAACTTCTCCAAAAGCCGCGTGGACTTCGGGCGAGCCGCTCAAACCTTTTGGCAGGCCTTCATTTCATTTCGTGGGATTTTGGCGCATCCGGACTGACCCGGTCCACGAACAAGCAGAGactttcttttatcttttctCAGAAGTTGGGTTTCATGGAGTCTTTGTGGAAATCATTTATTGTCAACACAGCAACGAGGTCTGGAGCCATATCATTGCACCATCATAACAAAGTTACTACACGATGAGCAGCCAGTCGATGCACAACGTCGTTGACCCAGTGTTTCAAAGCAAGATGCCATTATTCGACGGGACCATAGCGTCAAAACCACAAAACATGTCTGGTTTCCTGGGTAAGCGGATACTGCAGTACAACGGGGCTTACTTCACTTATGATCCCAGAGGAAAGGACGGAGCAGGATTCACTCCTCCTTGGAGCAACTCAAAGACTTCTCTGCTGGATGGTAGAAGTCCTGTAAGTCACCTCTCTGGCATGGAGGGACAAAACCACATAATTTACAGGCAAGACAGCAATTCTTCAGAGGAAGGCCATTCTCATTCTTCCTCTCTGCATCGTGCCCCTGGGATCAACAGTCCCACAGAGGCCGTGCCAGTGGCTGttagaaaacaaaaaactggAGGTGAGAACTCCTCTCCCACATCTGAAAGCTCTGTTTACTTAGCCATTCCTAAGCCAATTTATATGCATAACCCCTGCTGTAATGAACTGGGTTGTGTGATGGGACAACGATACAGCGTGGAACATGGCTCTCCCAGGATACCGAACACTGTATATGAGCATGATTGGATGCACACTGATGCTAACTACACTGAAAGACCGCCCATCCAGAGGAAAGCACAAGACACGCTGCTTCAACAGAGAGGTTTACAGCTTGATCCCAGTGCAGAGCCATTAAAGaggactgtagagacatgcagCCCAGGTAAAGCAAGGACTTTTCCTGCTACGATTGACCCAAACTATAGCAGTTACCCCTGCACCCCGACTCACACACTGTTTGGTTCTCTAAGTGAGCAGAGCCAGCGTTTACAGACTTCCCCCAGAGGCTACACTAGCTTATACCCCCCCCATCCCACATATGGGCATATGACCTCAGAGGTTTATCAGGAACATTCTCCCATGTCCAAATATGGCCAGCTAACACAGCACCCAATGTTTTACTACTCCCACGCAAATGTGGAGGTAGAAAACAGGACACAGTTTAAGCGAAGAGAAGATGTGCCTGTTATTCTCAAACACACAATCTCAAACCCCCGGGAGCATTACATAGTGCCTCAGTCGCTTCATGATGAAAGTCCTTTGCCTAGCACTGAAACATTGCCAAGTCATGTCTTGATGCGGGGTCTTGACTATCAGTGTTATGCAGTTCCCAGATTTCATTTAACTGCAAACCAACTCcaagcccccctaaaaaggcaACATGCGTCGCCTAGCTTGCACTCTAATCGCATAAATGTTTCCCCATCCAGACAATACATGGAGCACCCCATGGTCTCTGCAACCAACCTGCATAAGGACAAACCCAATGACAGCCTGCATGTTCAGCAATCACCTACCAACTCACCATTCCTCAGTTTGGACCAATCCAGTCCTACCAGGCATGTAAGCCAACCTGGCGTCTCACCATCCAGCATACAAATTAACAGATTTTTCCCCCCATTCACCAGCCTGCACATAGACCGGCCTGTCTTTCCACCAACTGGTTTGAACATGGACAGAATCCTGGACTATTCCTCCTGTGAAGCCCAGGTTACATGCCCGAAACAGCCAAAAAGCCTTCCTGTTTCCCCAGCGGCATGGCCGCCCCGGTCACCGCATCACAGTTCACATCGAATTCACGCAGCTGTACCTAAAAGCGCAAATGTCCGAAAAATTATTTATTCCCCTGCTCTTGCACCAGGAAACAAACACAATAGCCCTGTGTCCAGTTCAGGCACTTCTGTTCTTAAAAGGTGCATAAAAAGAAGTATTTCTCACTCATCTTCACCTATCAATATAAAAGAAGAGCATAGGGATTTATGTGAAGTGGAACTCAATAAGAAACGACACAGGGTGGAAATGGAGAATGCACAAGTAGGAAATAAAACCGAATCTCCTCCTATGCCAGTTATTGACAATGTTTTCAGTCTGGCACCTTACCAAGCATACCTGCAGGCCCCTGGAGTGTTATTTTCAGGCAGAGTACGTCAGAGAAACATCCAGTCGTCTGAGCACTGTGAAGTCAAAACCAAGCCAGACATCAGAGCGAAAAGGCCAGATGGAGATGAACGGCAGTCTGTTGTCTCTCTGGTTTCCAAAAAAATCTGTGCAGATACTCCAACAGAGAAACCTGTTGTAGAAATCGTTGAACCTAAAAATATTAAAGCGGAAAAAGTAGATCCATCAGACACGGACAACTCCGTAGAGAGTCCTGTTAGTCAAAGGGACAGCAGCAAAGTAACAATCAAAAAAGAGCCTGAAGAGACGATTTCATCCAACATTGGGCCCATGTTAGTGATAAAGAAATGTGAACCTGATGAACTTGAAAGTAAACCCTCTTTAGCAGATGAAAATGAGACTTCACATGAGTCCAAACCTGGTGAGGTGACTGCACCGATGGACTCATCTTCTCAGAGAGATACGTGCACACTCACCCTGCAACCCAAATCCATTAATCCACCTCAGCCACCTGAGAGGAAACTAAATTTCAGAAACATTCCTCCCCAGTGTCTGAAACTTTCCACCTACAATCTAATTCTCCATGATACGAAACCTTCTTGCCCTGCTCCACCCCCAGAGATGCCACCTGCACAGCTGATAACTGAATTCATACCTAAACAAGAACCCCAAATGCCAGTCCGCAAGCACTTCTTTGAGTTGCACCATTCCCTCTGCAAGCAAGTATCCAACCATGTGTTGGCTTCTTCAAAGCAGGAGCTCAGAACCTGGTTGTCTCAGTTGGGACTGATTGAACCAGCAACTCCTTCAGCCAAAGTCCAGAAAGTGTCCTGTTTGTTGGGGGTAAATGCCAGAGAGGTGTGGCTCAATGAAGAGATGAAGTCAGCGCTCCATAAGGTCCTGGAGAGGTTGAGAGAGTACACCGCCCAGGAACGCTGTCCTTTTCCACACGTCATGCGCACGGGGGCAGTGTTCCTCCCCATGCTGGTGGTGAAGGAGCTGCTGTTTCCGATGGTCCAGGGCAGCTTCATCGACCAGATCCTGCAGGAGCACAGAGTGGAGCTGCGGCCCACCACGCTCTCGGAAGAAAAGATCCTCATTCAGCTTCATAAACGAGCCTGTTCCTCCAGGCTCAGGAGACTGATGTCCCTCAAACACCTGCCTGACATCTACCCTGATGTGGTCAACCTTTTGTATCACGCCTGTGTCTGCAAACATCTGGGATTAGATTTGGATGATCCTGCTGACAGAGACAAAGATGACTGTTGTGAGGAGACGATCAGCTGCTGGACTCCTGTATTTTCAGACATCACCGCCTCACCCTCAGAGTCACACCAACAGAGACATCCGGAGAACCAGGGAACAAAATCACATTTGAACAAGAATAGAACAAAAAGCAGGGTAAAGCACCGTTCGAGGCATGTGTTTCTGGACAATGGTTTGTCAGATGAGGCAGATGACACAGAGAAGAGAGTAAGTGGAGGCGTGCTGAATGCATTTAGTGAGAAAAACTGGAGTGGCCATCAATCTGAAGGAACTGAGAATGGAGAAAGTGACTGTATCGTTGCAGAGCAGCATTCTACACTCATTCAACTTAGCACAACTTCTGAAAATTCATGGATGTGTCCTTTAACCGTGGACAAGCTTACTCCATCTCCGAGTGACACCGAAACGGAGGAAGAATACTCCAGTCTGCAGCCCGTTGGAGCCAAGTCTCCGGTTGGATCCAAGAATTGTTCAGGTGTGATTCTCAAACTGAGGAGGATGTTTAGCAAAGGTCTAAACCGAAAAAAGGCCTGCTACCAAGCGATCTCAGACTCCGGGACATTTGCTGATCCTTCCCTTTCACAGACGGATGGCGGGGAGGGAGAAGTGAACAGCGGGAGGGACCTTCACAGGAGGACGCCCAAAGTAACCCACAGGTGGCAGAGAACAGGAAGCTTCTCTCACGCCTTAAGACCCCTTAGCAGCTCttctaaaagaaaacacagatcaCTCTTAAAGATCAAATACTGCCCCTACTTGTCTGCCTGCCACAGCGCTGAACACAGGAGACGATGGGTCCTGCGTTCAGCTGTCCAGAGGGCTCGGAGGGCCATGAGGTTCTACTACCCAGACCTGGTGGGAAAGAGGATTCGCCATCTGTACGAAGAAGATGACAAATCAGAAGTGTGGTACAGAGGGGAAGTGATACGTATCCATGAGGCCCACGCTAATCCTCTAAAGACTATATTTGAGGTCAGGTATGACAGCGAGCCAGATTGGAAGTACTACCTAGAGCTACTGATAGACTATAAAAACGGCTGGCTCAAAATTGAAGACTAGTTTCTCCACACAAATGTCTAGGTGCCAGTTGTGCTTTTGGTCATGTCACAGAGTGCAATCAGTTTTAAATCTGTTCCCTTTACTGTCCATTTTTGATGGCCAACAACAAGCGGATGAGCCCTAAATATTTGTTTGCCATCCTCAGGAATGAAGTTGGACTGGATTATTTTGTTATGAGGTCAGCTAAACATTCTTTGTCACTTGCGACCTACTAGGTGCATTCTTTGACTATAGCCATTGTGCAAAATCCTGTagttttttaagtattttaagcGCTTATCATCTTTGACACATCTATCAATGGCTTTTCTGGTTTAAACACAAAAAGGATTATGGTTATTTGACAGAAGTGCTACAACCTTGCAAAAtggatgcaaaaaaaaacaaacaatccaTGTATCCTTTTAGGGATTTTAATTGCAAGCAACTATAAAGTCTAGTATTTGTCATCCACTTTTCTGgttaaatttagttttttttaatttttttattctgaGTGAAGTTAggttttctattattttgccaGTAAAAAATACTAAACCAGCAAATGACATGcagacatatataaaagggtttACTGTCAAACAGTGCCAGCCACATGTATATAGGTTTACAGTAATAGTGCCAGTCGGGTGCATTATTATAGCAGTGATTTTGACCCTGATTGTGGttggtgttttgttgtgtgtatctGAAGCTGGACAGGCATTAATGTAGTTCTGGACTGAAGCTGGACAGGCATTAATGTAGTTCTGGACTGAAGCTGGACAGGCATTAATGTAGTTCTGTACTAAGCTGCTCATAGTCTTTAATGACACCCGGGCTGAGATGCCCCCGTGCCATAGCGTTTGAATCACTGTGAACCTTAAgacttattttatatatttttccttGCAGATTGAATTGTTTAAACATTATTCTCATTGtcttaaataaatgtttgtaataatcaaa

Function

GO: NA

KEGG:

id description
ko03008 Ribosome biogenesis in eukaryotes

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039808170.1 True 5570 mRNA 0.46 3 17846230 17856728

Neighbor

gene id symbol gene type direction distance location
hexa hexa,LOC102299697,LOC102797931 coding downstream 27295 17811551 ~ 17818935 (-)
nr2e3 nr2e3 coding downstream 42403 17800703 ~ 17803827 (-)
stoml1 stoml1 coding downstream 46843 17796035 ~ 17799387 (-)
LOC120563763 LOC100692956,LOC102798821 coding downstream 50323 17792647 ~ 17795907 (-)
stra6 stra6,LOC102799117 coding downstream 104925 17724192 ~ 17741305 (-)
ints14 vwa9,LOC102797047 coding upstream 24680 17881408 ~ 17886727 (-)
megf11 megf11,LOC103353722,LOC102795465 coding upstream 75477 17932205 ~ 18006530 (-)
LOC120563782 rpl4 coding upstream 174220 18030948 ~ 18032194 (-)
LOC120564816 NA coding upstream 174461 18031189 ~ 18031256 (-)
LOC120564814 NA coding upstream 174740 18031468 ~ 18031539 (-)
G85802 arih1,LOC107662282,LOC107591299 non-coding downstream 444 17842100 ~ 17845786 (-)
G85799 NA non-coding downstream 11346 17829508 ~ 17834884 (-)
G85711 NA non-coding downstream 104224 17741692 ~ 17742006 (-)
G85660 NA non-coding downstream 188859 17657145 ~ 17657371 (-)
G85613 acsbg1,LOC102779547 non-coding downstream 301825 17544155 ~ 17544405 (-)
G85806 NA non-coding upstream 32139 17888867 ~ 17892467 (-)
G85815 NA non-coding upstream 159379 18016107 ~ 18016774 (-)
G85910 LOC103141279,LOC103380252,LOC107097849,LOC106536919,LOC102790651 non-coding upstream 486814 18343542 ~ 18344341 (-)
LOC120564122 NA non-coding upstream 818535 18675263 ~ 18677985 (-)
G86064 NA non-coding upstream 900324 18757052 ~ 18761076 (-)
fbxl22 fbxl22 other downstream 200710 17626011 ~ 17645520 (-)
G85435 NA other downstream 1037814 16808056 ~ 16808416 (-)
trnah-gug_10 NA other downstream 1081444 16764715 ~ 16764786 (-)
LOC120563869 frmd5,LOC104917831,LOC102299895,LOC106561170 other downstream 1082512 16697095 ~ 16763718 (-)
G85321 NA other downstream 1405265 16439374 ~ 16440965 (-)
ppcdc ppcdc other upstream 4985 17861713 ~ 17877065 (-)
dennd4a dennd4a other upstream 37125 17893853 ~ 17956629 (-)
trnaq-cug_6 NA other upstream 70319 17927047 ~ 17927118 (-)
G85813 rpl4 other upstream 174280 18031008 ~ 18036276 (-)
lctlb lctl,LOC104967861,LOC107388717,LOC106956364 other upstream 184900 18041628 ~ 18047840 (-)

Expression


Co-expression Network