hexa (hexa,LOC102299697,LOC102797931)


Basic Information

Item Value
gene id hexa
gene name hexa,LOC102299697,LOC102797931
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 17811551 ~ 17818935 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039808171.1
AGTCATGTGACTGCATAGCACCTGACTAACGCAGCTTGGCAGTGCTGTTTGCTTTGGAATGAGTAATGTGTAATATGGAAGTCATGTGTATTCGTAGTTTTGGACGATACACTCGTCCAAAATGTAATTTGATTCTACTAATTATCCTTCAGCTTGGCCTACACACAGTGGAGGGAGTGTGGCCATTGCCGCAGTCGTTCACCTCCTCAACCGAGCGATACCCTCTGAACCCAAATGCTTTCTACTTTGGGTACGGAAGACAATCAGCCGCACAGCAGGACTGTCCTGTTCTCGATGCTGCATTCAAGAGAtatttttctctcatttttccAGACTACACTTCTGGGTATGGTGTTCTGCGATTCAGTGGGGATAAACCATTTACTGTTGAGGTCAGAGTTGATCATGCTGATTGTGAAAGTTACCCAAATGAGAACTCTTCTGAGAGATACAATCTGAGTGTCTCTGCAGGACAAGCATCTCTGAATGCGGAAACCGTGTGGGGTGCTCTAAGAGGTCTGGAAACCTTCAGTCAGCTGGTGTATCAAGATGATTTTGGCACATATTTTGTGAACAAGACTGAAATTGATGACTTCCCGCGGTTTCAGTTCAGGGGGATTTTGTTGGACACTTCACGTCACTATTTACCAGTGCAGGCCATTTTAAAGACTCTGGATGCAATGGCCTACAGTAAGTTCAATGTGTTTCATTGGCACATTGTTGATGACCCCTCCTTCCCTTACCAGAGCCGCACATTTCCAGACCTTTCCAGTAAGGGGGCTTTCCATCCGATGACTCACATCTACACACAGTCAGATGTGAGAAGGGTGATCTCACATGCCAGGCTGTGGGGAATAAGGGTCCTTCCGGAGTTTGATTCACCCGGTCACACCCAATCTTGGGGAAAAGGGCAGTCTGACCTGTTGACACCCTGCTACAGAGGGAGCACCCCTTCAGGTACTTTTGGTCCTGTTAATCCAGTGTTACCCTCCACCTACCAGTTCATGGCGAGACTATTTAAAGAAGTGTCATCGGTGTTTCCTGATTCCTATATCCACTTAGGAGGGGATGAGGTGGACTTTTCCTGCTGGAAGTCCAACCCCGATGTCCGAGCATTCATGCAGAAGATGGGATTTGGAGGAGACTTCACCAAACTGGAAGCATTCTACATGGAGAAAATTGTGAATATCACTTCAGCTCTCAACAAGACATCTATTGTGTGGCAGGATGTGTTTGACTACCATGAACGAATTCCTAAGGACACAGTGCTGCACATCTGGAAGGGCACCCCAGCTAGTTATAAGGAAGAGCTCAGCAGGATGACCAAAGCTGGCATGAGGGTCCTGCTGGCTGCCCCATGGTACATCAACCACATTGCCTATGGCCAGGACTGGCGCAACTACTACACCGTGCAGCCTCTGAACttttctgGTACTGAGGAACAGAAGAAGCTGGTGATAGGGGGTGAGGTCTGCATGTGGGGGGAGTATGTCGATGCCACCAATCTCACTCCACGTCTTTGGCCAAGGGCAAGTGCTGCCGCAGAGAGACTGTGGAGTGATGAGAAGCAGACCTCCAGTGTGGACGAGGCGTTTCCTCGCTTGCAGGACTTTCGCTGCAAGCTTGTGAGGCGTGGCATCCGAGCAGAGCCTCTGCATGTTGGACACTGCAAACATGAGTACCAAGGTGTTTGAAGATGTTGGATGGATTAACATTGCAAGGTTTTTCTGGTGAATGTTTGAACTAATTAAGTTCATAGTtgcctttttttaaagtggtctaattttattttaatacaaaTTGTTTCTCCAGTCTTAATGCATACATTAAAATACTTTCTCAGGGA
>XM_039808172.1
GCCCCAGTCATGTGACTGCATAGCACCTGACTAACGCAGCTTGGCAGTGCTGTTTGCTTTGGAATGAGTAATGTGTAATATGGAAGTCATGTGTATTCGTAGTTTTGGACGATACACTCGTCCAAAATGTAATTTGATTCTACTAATTATCCTTCAGCTTGGCCTACACACAGTGGAGGGAGTGTGGCCATTGCCGCAGTCGTTCACCTCCTCAACCGAGCGATACCCTCTGAACCCAAATGCTTTCTACTTTGGGTACGGAAGACAATCAGCCGCACAGCAGGACTGTCCTGTTCTCGATGCTGCATTCAAGAGAtatttttctctcatttttccAGACTACACTTCTGGGTATGGTGTTCTGCGATTCAGTGGGGATAAACCATTTACTGTTGAGGTCAGAGTTGATCATGCTGATTGTGAAAGTTACCCAAATGAGAACTCTTCTGAGAGATACAATCTGAGTGTCTCTGCAGGACAAGCATCTCTGAATGCGGAAACCGTGTGGGGTGCTCTAAGAGGTCTGGAAACCTTCAGTCAGCTGGTGTATCAAGATGATTTTGGCACATATTTTGTGAACAAGACTGAAATTGATGACTTCCCGCGGTTTCAGTTCAGGGGGATTTTGTTGGACACTTCACGTCACTATTTACCAGTGCAGGCCATTTTAAAGACTCTGGATGCAATGGCCTACAGTAAGTTCAATGTGTTTCATTGGCACATTGTTGATGACCCCTCCTTCCCTTACCAGAGCCGCACATTTCCAGACCTTTCCAGTAAGGGGGCTTTCCATCCGATGACTCACATCTACACACAGTCAGATGTGAGAAGGGTGATCTCACATGCCAGGCTGTGGGGAATAAGGGTCCTTCCGGAGTTTGATTCACCCGGTCACACCCAATCTTGGGGAAAAGGGCAGTCTGACCTGTTGACACCCTGCTACAGAGGGAGCACCCCTTCAGGTACTTTTGGTCCTGTTAATCCAGTGTTACCCTCCACCTACCAGTTCATGGCGAGACTATTTAAAGAAGTGTCATCGGTGTTTCCTGATTCCTATATCCACTTAGGAGGGGATGAGGTGGACTTTTCCTGCTGGAAGTCCAACCCCGATGTCCGAGCATTCATGCAGAAGATGGGATTTGGAGGAGACTTCACCAAACTGGAAGCATTCTACATGGAGAAAATTGTGAATATCACTTCAGCTCTCAACAAGACATCTATTGTGTGGCAGGATGTGTTTGACTACCATGAACGACGCAGCTCTCTATCAGTGGTGGAGGTATGGAGACATGGCTGTTACCTGTGTGAAGTGCGGAGGGTGACTAATGCAGGGCTCAGGGTGATTCTGGCCTCTCCATGGTATCTGGACCAGCCAGGGCCCACTCACAACTGGGCCCGCTACTACACTGTGTGGCCTCTCGCCTTCAAGGGTACTGAGGAACAGAAGAAGCTGGTGATAGGGGGTGAGGTCTGCATGTGGGGGGAGTATGTCGATGCCACCAATCTCACTCCACGTCTTTGGCCAAGGGCAAGTGCTGCCGCAGAGAGACTGTGGAGTGATGAGAAGCAGACCTCCAGTGTGGACGAGGCGTTTCCTCGCTTGCAGGACTTTCGCTGCAAGCTTGTGAGGCGTGGCATCCGAGCAGAGCCTCTGCATGTTGGACACTGCAAACATGAGTACCAAGGTGTTTGAAGATGTTGGATGGATTAACATTGCAAGGTTTTTCTGGTGAATGTTTGAACTAATTAAGTTCATAGTtgcctttttttaaagtggtctaattttattttaatacaaaTTGTTTCTCCAGTCTTAATGCATACATTAAAATACTTTCTCAGGGACTTCTCTCATTACCTTTTCTCATTCAAATTTTTTGTAATAACGTTTTGAGTAGTTTTATTTTAGATTTGACATATTTAGCAgtcataaataaagaaatgttaaCAAAAACCTTGTTTGAAGAACCCAAAGTGCTGCACTGTGATGCCATGTTGAATTGTACTTGATGACTGCAAAATTATAGAATGTAGATTTTAAATTATATGAACACTGCCAGTATGCTATAGCTTGCACTCttgcaatgtaatgtaatgaaatatTATTGGTGTGCAGGTTGACAGTTTAATCTCAATGCtaatttaaaacagaaaaacaaacacattgacAGCCTTTTTCAAGATATTGGCAGTTTAGTGTTCCAGGTGGTCCAACCTTCATGTCTTAATGGACGAAAcgagcacccagaggaaactCAAGGAGAGATGACAAGAACATGTACACTTCACACAGAAACTCaattcagattttattttattcatatcaACATATGACACTCATTCTCAGAAATGTAGGGACTCCTCATTAAAAACCCTTTTAACAGGGAAAAATGGGAGAAACctcaggaggagaggggggataCCTCCTCTAGGATGAACAGACATGCAGTAAGTGTCATATCTTTCAACAAAAATTAAACTAGTAGAATTGCAATGGAGAAacagtaatataataataatgtgggGGTGGCTTGTCGCTCGGAGGTAGAGTGGTCGCCCCTCAACCACAAGACGGTTCGATCCCAGGCTCCTttggccacatgtcaaagtgtccctgagcaagacactgagaCACACGTTGCTCCCCAGATGCTGTATgtatagctgtccactgctcctactGCTtagatgggttaaatgcagtaattaaatttcactacattgtactgtgCATGTGAGAATAAAGATAAGaataaa
>XM_039808173.1
GTGGCCCCAGTCATGTGACTGCATAGCACCTGACTAACGCAGCTTGGCAGTGCTGTTTGCTTTGGAATGAGTAATGTGTAATATGGAAGTCATGTGTATTCGTAGTTTTGGACGATACACTCGTCCAAAATGTAATTTGATTCTACTAATTATCCTTCAGCTTGGCCTACACACAGTGGAGGGAGTGTGGCCATTGCCGCAGTCGTTCACCTCCTCAACCGAGCGATACCCTCTGAACCCAAATGCTTTCTACTTTGGGTACGGAAGACAATCAGCCGCACAGCAGGACTGTCCTGTTCTCGATGCTGCATTCAAGAGAtatttttctctcatttttccAGACTACACTTCTGGGTATGGTGTTCTGCGATTCAGTGGGGATAAACCATTTACTGTTGAGGTCAGAGTTGATCATGCTGATTGTGAAAGTTACCCAAATGAGAACTCTTCTGAGAGATACAATCTGAGTGTCTCTGCAGGACAAGCATCTCTGAATGCGGAAACCGTGTGGGGTGCTCTAAGAGGTCTGGAAACCTTCAGTCAGCTGGTGTATCAAGATGATTTTGGCACATATTTTGTGAACAAGACTGAAATTGATGACTTCCCGCGGTTTCAGTTCAGGGGGATTTTGTTGGACACTTCACGTCACTATTTACCAGTGCAGGCCATTTTAAAGACTCTGGATGCAATGGCCTACAGTAAGTTCAATGTGTTTCATTGGCACATTGTTGATGACCCCTCCTTCCCTTACCAGAGCCGCACATTTCCAGACCTTTCCAGTAAGGGGGCTTTCCATCCGATGACTCACATCTACACACAGTCAGATGTGAGAAGGGTGATCTCACATGCCAGGCTGTGGGGAATAAGGGTCCTTCCGGAGTTTGATTCACCCGGTCACACCCAATCTTGGGGAAAAGGGCAGTCTGACCTGTTGACACCCTGCTACAGAGGGAGCACCCCTTCAGGTACTTTTGGTCCTGTTAATCCAGTGTTACCCTCCACCTACCAGTTCATGGCGAGACTATTTAAAGAAGTGTCATCGGTGTTTCCTGATTCCTATATCCACTTAGGAGGGGATGAGGTGGACTTTTCCTGCTGGAAGTCCAACCCCGATGTCCGAGCATTCATGCAGAAGATGGGATTTGGAGGAGACTTCACCAAACTGGAAGCATTCTACATGGAGAAAATTGTGAATATCACTTCAGCTCTCAACAAGACATCTATTGTGTGGCAGGATGTGTTTGACTACCATGAACGACGCAGCTCTCTATCAGTGGTGGAGGTATGGAGACATGGCTGTTACCTGTGTGAAGTGCGGAGGGTGACTAATGCAGGGCTCAGGGTGATTCTGGCCTCTCCATGGTATCTGGACCAGCCAGGGCCCACTCACAACTGGGCCCGCTACTACACTGTGTGGCCTCTCGCCTTCAAGGATTCCTAAGGACACAGTGCTGCACATCTGGAAGGGCACCCCAGCTAGTTATAAGGAAGAGCTCAGCAGGATGACCAAAGCTGGCATGAGGGTCCTGCTGGCTGCCCCATGGTACATCAACCACATTGCCTATGGCCAGG

Function

symbol description
hexa Predicted to enable N-acetyl-beta-D-galactosaminidase activity and beta-N-acetylhexosaminidase activity. Predicted to act upstream of or within carbohydrate metabolic process. Predicted to be located in lysosome. Is expressed in several structures, including axis; lens placode; optic vesicle; polster; and visual system. Human ortholog(s) of this gene implicated in Tay-Sachs disease. Orthologous to human HEXA (hexosaminidase subunit alpha).

NR:

description
beta-hexosaminidase subunit alpha-like

GO:

id name namespace
GO:0005975 carbohydrate metabolic process biological_process
GO:0004563 beta-N-acetylhexosaminidase activity molecular_function

KEGG:

id description
K12373 HEXA_B; hexosaminidase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039808171.1 False 1846 mRNA 0.47 14 17812463 17818927
XM_039808172.1 True 2757 mRNA 0.44 14 17811551 17818932
XM_039808173.1 False 1572 mRNA 0.49 12 17813374 17818935

Neighbor

gene id symbol gene type direction distance location
nr2e3 nr2e3 coding downstream 7724 17800703 ~ 17803827 (-)
stoml1 stoml1 coding downstream 12164 17796035 ~ 17799387 (-)
LOC120563763 LOC100692956,LOC102798821 coding downstream 15644 17792647 ~ 17795907 (-)
stra6 stra6,LOC102799117 coding downstream 70246 17724192 ~ 17741305 (-)
commd4 commd4 coding downstream 112984 17695464 ~ 17698567 (-)
c8h15orf39 NA coding upstream 27295 17846230 ~ 17856728 (-)
ints14 vwa9,LOC102797047 coding upstream 62473 17881408 ~ 17886727 (-)
megf11 megf11,LOC103353722,LOC102795465 coding upstream 113270 17932205 ~ 18006530 (-)
LOC120563782 rpl4 coding upstream 212013 18030948 ~ 18032194 (-)
LOC120564816 NA coding upstream 212254 18031189 ~ 18031256 (-)
G85711 NA non-coding downstream 69545 17741692 ~ 17742006 (-)
G85660 NA non-coding downstream 154180 17657145 ~ 17657371 (-)
G85613 acsbg1,LOC102779547 non-coding downstream 267146 17544155 ~ 17544405 (-)
G85601 LOC101478969,LOC102214964,LOC102308915,LOC100701437,LOC102780768 non-coding downstream 294384 17515903 ~ 17517167 (-)
LOC120563415 NA non-coding downstream 715788 17090105 ~ 17095763 (-)
G85799 NA non-coding upstream 10573 17829508 ~ 17834884 (-)
G85802 arih1,LOC107662282,LOC107591299 non-coding upstream 23165 17842100 ~ 17845786 (-)
G85806 NA non-coding upstream 69932 17888867 ~ 17892467 (-)
G85815 NA non-coding upstream 197172 18016107 ~ 18016774 (-)
G85910 LOC103141279,LOC103380252,LOC107097849,LOC106536919,LOC102790651 non-coding upstream 524607 18343542 ~ 18344341 (-)
fbxl22 fbxl22 other downstream 166031 17626011 ~ 17645520 (-)
G85435 NA other downstream 1003135 16808056 ~ 16808416 (-)
trnah-gug_10 NA other downstream 1046765 16764715 ~ 16764786 (-)
LOC120563869 frmd5,LOC104917831,LOC102299895,LOC106561170 other downstream 1047833 16697095 ~ 16763718 (-)
G85321 NA other downstream 1370586 16439374 ~ 16440965 (-)
ppcdc ppcdc other upstream 42778 17861713 ~ 17877065 (-)
dennd4a dennd4a other upstream 74918 17893853 ~ 17956629 (-)
trnaq-cug_6 NA other upstream 108112 17927047 ~ 17927118 (-)
G85813 rpl4 other upstream 212073 18031008 ~ 18036276 (-)
lctlb lctl,LOC104967861,LOC107388717,LOC106956364 other upstream 222693 18041628 ~ 18047840 (-)

Expression


Co-expression Network