LOC120563796 (LOC104965208)


Basic Information

Item Value
gene id LOC120563796
gene name LOC104965208
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 18967291 ~ 18981782 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039808204.1
ATGACGAAAGCCCACAGCGGCAACGATGAGGTGGAGATGCGTGTGGTTGTGTtcctggctttgtctgttgccAGTGTCATCGATGTCCAAGCCAGACTGGTTGGCAACCATGTCAGCAGCATCTGCAGCACATGGGGCAGAGAGCACTTCAAGACATTTGACGGAGATGTGTACCAGTTCCCTGGTATGTGTGAGTACAACCTGGCGTCCGACTGCCACGAGTCCTACCAGGATTTCTCCGTGCACATGAAGAGGATAGACAAAGATGGAAACCCTACAGTCAGCCATGTGGTGGTCACCATCAATGACCTTTTGTTTTACCTCACCAAGGACATGATCACTGTGAATAACCTCCCtgtcAAAGTGCCATACTACAATGCAGGTGTacaagtggaacaaaattcTGTTTACATCAAGCTCCAATCTAAAGTCGGCATCACTGTCATGTGGAACGGTGACGATGCAGTCATGGTGGAACTGGATACTGATTATGCAAATCGTACCTGTGGACTTTGTGGAGACTTCAATGGTGTTTCTGTCCAGAATGAGTTCATTCATAAAGGTCGCAAAATCAGCCCCATTGAGTTTGGCAACAAACACAAAGTCCATCGTCCAAATGATGATTGTGAGGACCCCTATGAGGAGGAAGATGAATCACTGGAAGCTGTGCTGGATTCATGCAAGGAGTTTCAAACCACCTGTAACCAGATGCTGCGTTCAGAGCCCTGGAGCTCCTGCACCACTCTGATCAACCCTGAACCTTACATCCAGACCTGTGTGCAGGACATGTGTGGCTGCGCCAATAGAACAAATGACTTCTGTGTCTGCAGCACACTGTCTGAGTTCTCTCGGCAGTGTTCCCATGCAGGAGGGCAGCCTCCCAACTGGAGGACACCTCAGTTCTGTGCTAAGCAGTGCCCATTCAACATGGTTTATAAAGAGAGCGGTTCTCCTTGCATGGATACATGCACACTTCTGGACACCGGTTCACTGTGTGAGGACCACAAAATGGACGGCTGCTTCTGTCCTCCTGGAACTGTGTTTGATGATATTTCCATGAGAGGGTGTATTGCTCAATCTGAATGTCAGtgcaaacacaacaaaatctATAACTCCGGTGAGGTCTACCGACAGGACAGAGAGGAATGTACATGTGTTGAGGGTAGATGGGCTTGTGAGAGCCTTCAAACACCTGCTACATGTGCAGTTGAAGAGGGTTCACATGTAACTACCTTTGATGGAAAAACCTTCACCTTCCATGGAGACTGTTACTACACCCTAGCCAAAGTGGAAAGCAAGGATCATGCAAGTCCAAAGTTTACACTCCTGGTTCAGTTGGTGCCGTGTGCAAATCAAGAGTTTGACACTTGTCTAAAGAGCCTTAAAATCCTGCTGAACAATGACAGAAACAATgtaTTAATGTTCACTTCCGATGGCAAAGTGAAGCAAAACATGCAGACCATCAGTTTGCCATACCACTCAGATGACATCAACATATTCCATGCTTCATCCTTTCACATCTTGCTCCAGACCAGTTTTGGTTTGCAAATTCAGATCCAGCATGTGCCAGTCATGCAAGTCTATGTCAGCCTAGAACAAAGCTACAGAGCAAAGACACGTGGCTTATGTGGGAACTACAACATGGCCCTATCTGATGACATGAAGACTCCTCAGGGGATGGTGGAGGGAACAGCAGCAACTTTTAGTAACTCCTGGAAGGCTAACCTAATGTGCccagacagagaggaaagacTTGAGGACCCCTGTTCCCTTAGTGTggaaaatgAGTGGTACGCTAAACACTGGTGCGCCTTGCTGCTGAATCCAGACAGCACCTTTGCACAATGCCATTCAGCGGTAGATCCTGATATGTACTACAAGAGATGTACGTATGCCAGCTGTAACTGTGAGAAGAGTCAGGACTGCCTGTGTGCCATCTTCTCCTCCTACGCTCGGGCTTGTGCATCAAAGGGAGTGATCTTGACAGACTGGAGAGAGAATGTGTGCGATAAATACACAAGGAGCTGCCCAGCATCTCAGATCTTCTCTTACAAGCATCAGAGATGCCAGTTGACTTGCAAATCACTGGGCATAAAGCAACCAAGTTGCACTTCTGACTTCTTGCCTGTGGATGGCTGCTCCTGCTCCAAGGGTCTCTACCTAAATGAAAACGGCATCTGTGTCCCCATGGCAAAATGTCCCTGCTACCATAACGAAGTCTACATTAAGTCAGGAAAGTCCATCAACATCAAAGACGAGCACTGTGTGTGTACCAATGGAATGCTTCATTGTCATTCTTGGAGAGTGCACCCATCAACATGCTATTTTCCGAAAGTGTTTTTCAACTGCTCCGCTGCGAGCACCAGAGATCTGGGACTGCGCTGTGCTCGAACTTGTTTAAATCTGGACAGCAATGATTGTGAGTCCACAGAGTGTGAATCTGGCTGTCGGTGTCCAGCTGACCTACTAGATGATGGCAAAGGTTCCTGTGTGAAAGAAAATGAATGTCCCTGTCAGCACAATGGGCATATTTATTCCCCTGGATCACAAATCCCTGACCAGTGCAACATCTGTACCTGCAAAAGTGGAAGCTGGGAGTGCAGTAAGAATAAATGCTCACAAACTTGCATTATTTATGGTAGTGGTCACTACAATACATTTGATCAGCGAACATATGGCTTTCAAGGACATTGTTCCTATGTTGCTGTTAAGaACAAATGTGGCAATAAAACAGTACAGGACAACTTTGGAGTAATCACAGAAAATGTACCGTGTGGATCTACAGGCACCACATGCTCCAAAACTGTTAGAATCCAACTTGGGCAAAAGGAAATCAAACTATCAAAGGGTAATTATGACGAGGTGGACCTGGGACATGGTGCTGAGATTCAGTACAGAATAAGGAAGGTTGGCTTATATGTGGTGGTAGAATCTGCCATTGGTCTGACGGTGATGTGGGATGGCAAAACAACTGTTCGCATCATCCTGGAACCACAGCACAGCGGAGAGGTATGTGGCCTGTGTGGAGATTTTAATGGTGATGGACAGAACGACTTCACCACTCAGGGTCAGCTGGTAGTGAGCAATCCGATAGAATTTGCAAACAGCTGGAAAGTGTCAAGCGAGTGCCTGGATGTGGAAACAAATGCTGACCCTTGTGGAGCAAGACCCAATCGACTTCACTGGGCACAAAAGATGTGCAGCATTATAATTGGAAAAACATTCCAAGATTGCCACAATAAGGTAGCCCCCCTTCCATTTTATGAGAACTGTGTAAGAGACTCATGTGCCTGCGACTCTGGAGGAGACTGCGAGTGTTTCTGCTCAGCAGTTGCAGCTTATGCTCAAGCTTGTAATGAGGCTTCTGTCTGTGTTGCATGGAGAACTCCAGAAATCTGTCCTGTCTTTTGTGATTACTACAACAGCCCAGATGAATGCAAGTGGCACTACAATCCTTGCCACACACCTTGCTACAAGACCTGTTTGAATCCAGAAGAAAAATGTAGCAAACTTTTACCCAACCTGGAAGGTTGTTACCCTGTATGCCCTGAAGATAAGCCCATATTTGATGAGGAGACTGGGATGTGTGTGGAGGAATGTCCAGGTTGCTTTTACAACAACACTAGATACGAGGAAGATGAAGTTATTTACAATGTAACTGACAATTTGGGAATGTGCTACTATGCAATATGTAAGAATTCAACAGTGATACATGGAAATGAACCTTGCTCTAGTACAACTGTcccaacaccaacaacaacTATTGCCACCACTACACCCGTAACAACACCAACTGAACCTACTACTACAACAACTGAACAGCcaactacaacaacaaaatcacCACCAACTAAACCTACTACTGCCACAACAACTCAAGAGCCAACCACAACACCATGTATTACAACGTGTGATTGGTCAGAGTGGTATGATGTGCATAAACCAGGAGAGGACAAAAGTGACTGGGAAACATATGAGAACATCATAAATAGTGGTAAACAAATATGTGAAAATCCCACAGAAATTGATTGTAGATCAACAGATTATCCTGACAAAAACTTCAATGATTTTGTGAGTCAAACTGGCCAGGTTGTTACTTGCGATGTGGGATATGGTTTAATATGTAAAAAAGAGGATCAGATCACACGTCCATTTAAGTGTTTCAACTATAAAATCAGAGTATGTTGTGAGGTAGAGATATGTCCAACCACAACCCATTCAACCCCATTAACTACACCTCCCACAACAACTGAAGAGCCAACCACAACCACAAAATCTACAACCCCACCAACTGAACCTACTACTACCACAACTGAAAagccaacaacaaccacaactgAAGAGCCAATAACAACCACAAAATCTACAACCCCACTAACTGAACCTACAACTACAACAACTGAAGAGCCAACCACAACATCTACAACACCACCAACTGAACCTACTACTACCACAACTGAAGAGCCAACCACAACCACACAATCTACACCACCACCAACTGAACCCactactacaacaacaacaacaacaactgaagAACCAACTACAACCACAAAACCTACAACCCTGCCAACTGAACCTACTACTACAACTGAAGAGCCAACCAAAACCACAAAATCTACAACCCCACCAACTGAACCTATTACAACCACAACTGAAGAGCCAACCACACCCACAAAAACTACCCGCCACCGTAGCCACTCCGCACCTCTACTGCTGGCTGAGAAGGGGTCGCCACAGCCACACCGCTGCGTCCACCAGCTGGACCTACTACCACAGGAGGCCGCCACAGCCACAGTCCTGCACCCCCAGCTGACCTGTGCTGCAGCAGCTGGAGGGGCCGCTACAGCCACACCCCATCTGCAGCCCCCGTACCTGCTACTACAGCTGAGGGCGCCGGCACCAATCTACAGCTGCACCTCTTGCCTGCACCCGCTGAAGGGTAGCCACACCCGCATCTACAGCCCACCCCGCTGGACCTGCTACTGA

Function

NR:

description
PREDICTED: mucin-2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039808204.1 True 4989 mRNA 0.47 29 18967291 18981782

Neighbor

gene id symbol gene type direction distance location
LOC120564058 LOC104965497 coding downstream 4473 18957869 ~ 18962818 (-)
LOC120563794 NA coding downstream 22542 18916810 ~ 18944749 (-)
LOC120563793 NA coding downstream 67717 18898853 ~ 18899574 (-)
LOC120563792 NA coding downstream 68557 18886553 ~ 18898734 (-)
LOC120563791 NA coding downstream 85513 18872018 ~ 18881778 (-)
kcnc1b kcnc1 coding upstream 41910 19023692 ~ 19037163 (-)
sigirr LOC107101974 coding upstream 88090 19069872 ~ 19080885 (-)
LOC120564059 ano9 coding upstream 100346 19082128 ~ 19093380 (-)
fancf NA coding upstream 155189 19136971 ~ 19139165 (-)
tmem276a LOC104964516,LOC104932831,LOC103363105,LOC103156503,LOC100692521,LOC103466466 coding upstream 231601 19213383 ~ 19216305 (-)
G86072 NA non-coding downstream 198153 18767495 ~ 18769138 (-)
G86064 NA non-coding downstream 206215 18757052 ~ 18761076 (-)
LOC120564122 NA non-coding downstream 289306 18675263 ~ 18677985 (-)
G85910 LOC103141279,LOC103380252,LOC107097849,LOC106536919,LOC102790651 non-coding downstream 622950 18343542 ~ 18344341 (-)
G85815 NA non-coding downstream 950517 18016107 ~ 18016774 (-)
G86195 tph1 non-coding upstream 29143 19010925 ~ 19012081 (-)
G86253 NA non-coding upstream 150069 19131851 ~ 19132166 (-)
G86337 pfcyp19b-tstr non-coding upstream 286429 19268211 ~ 19268437 (-)
G86394 NA non-coding upstream 386977 19368759 ~ 19369056 (-)
G86395 NA non-coding upstream 389225 19371007 ~ 19374939 (-)
syt7a LOC102215913,LOC101470916,LOC102782335,LOC103466506,LOC103141308,LOC107388681,LOC100690092 other downstream 271193 18614588 ~ 18696098 (-)
tmem258 NA other downstream 464425 18499319 ~ 18502866 (-)
lctlb lctl,LOC104967861,LOC107388717,LOC106956364 other downstream 919451 18041628 ~ 18047840 (-)
G85813 rpl4 other downstream 931015 18031008 ~ 18036276 (-)
trnaq-cug_6 NA other downstream 1040173 17927047 ~ 17927118 (-)
G86194 tph1 other upstream 25414 19007196 ~ 19010916 (-)
LOC120564082 svip other upstream 174976 19156758 ~ 19160487 (-)
arpp19b arpp19,LOC100693429,LOC102791975,LOC106919339,LOC101065895 other upstream 333603 19315385 ~ 19317478 (-)
G86402 LOC103363837 other upstream 406040 19387822 ~ 19388575 (-)
cep152 cep152,LOC104960117 other upstream 575670 19557452 ~ 19573688 (-)

Expression


Co-expression Network