lactb (lactb)


Basic Information

Item Value
gene id lactb
gene name lactb
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 16963477 ~ 16967097 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039808237.1
AAGGTTGAGCTGAGCGCACTTCTTAGGGGGCTGGGATGGCTCCATAGCTCTGAGATAAATTATGCTCCCTCGCTCTATTTTGTGTGACTCGTGATTTGATTCATTCGGTCTGGCTCGACTATGCAAACAGGAAGCAAGTTGTTAATTGGAGCTCATTAACAAGGGACAGTTATCGCCAACATAAAGCAAGAGAAGCAGCATAACTAACGATGTCACGATTGCTTTTGCCTAATCGTTTTTGTGCCAAATGTACCATACTAACAGCGCGCGGGCTTCCTTTGTTGACACCGCGAGCAGGAGCGCGAGTCAAGCCGCCGCAGTCCGATAAACTGAGTGCTTTTATTCAACAGCAAAGACGACACGTCGGAGGGTCAAACACAGCGTTTTTTAAATACAGGTCAAAGTCCAGGATTTGGCTATGTGGGGTTGGTGTGGGGATTGCTCTAGCTGTCGCTCTGAAATACCGCGCTGACACAGCCAACACTTCCTGTGACGATAAAGTAAAAGAAGCACAGAGGGCTGATCGATACAGCGATGCCATAACCGTGAGCAGGGACCTTGTGGAGCGGATACAGGTAAGCATAGAGGCTGAGGTCGGGGCTCCAGGGCTGGTGGTTGGGGTCTCTGTGGATGGTGCTCAAGTCTGGAGTGAAGGGATAGGTTATGCTGATTTGGAGAATCGAGTGCCATGCAGCCCAGAAACAGTGATGCGAATCGCCAGCATCAGTAAGCCCctcacatctgcagctgctgcacGACTGTGTGAGGACGGGAAACTAGAACTTGATGTCCCGGTCCAGAAATATGTCCCAGAATTTCCCCAGAAGCAATTTAATGGACAGGATGTCACAATAACCCCCCGTATGCTTCTGTCCCATCTGAGTGGTATACGGCATTATGAGAAAGATGCAAAGAAAGTGAAGGAGGACAAGGAGAAAGCTAAGCGTCTTATCAagccagaaaagaaaaaggatgaaAAGAGCTCATTCGAAAACAAAGATAAACCcacaacagaacagaacacCAAGGGCAAAGAAGCCACTCAGGCTCAGAAGAAGAAAGAGTTTGAGCACGAGGAATACTACTTGAAGGACAACTTTGAAAACGTCACTCAGGCCTTGGACCTTTTCAAGGATGACCCACTCATTTTCAAACCTGGCACCACTTTTCTGTACTCCACCCACGCCTTTACCCTGCTTAGTGCTGCTGTGGAGCGAGCTGCTGGACAGGGCTTCCTGGATGTCATGATGAACATGTTCCGTGAACTGGGAATGCTAAATACTGTGCCTGATGAGAATGACCCTATTATTTACCACCGCTCCAGATTTTATCATCTCAACAAGAGAGGACGTGTTGTGAACTGCCCGTACGTAGACAACTCCTACAAGTGGGCAGGAGGCGGCTTCCTTTCCACTGTGGGTGACCTGCTGCTGTTCGGTAACGCTCTCCTCTACAGCTACCAGGTGGCCCACCTTAAGGACACTGGGGGCTTGCTCCCTGGCTTCCTCAAACCCCAAACTTCCATTGATCTGTGGGCACCAGTTGATAGGACAGAGGCCAGCTGGGATAAGGATGGACTGTATGCCCAAGGCTGGCTGGTAGTGGAGGAACTACAGAAATATGGCCAGTGCAGGAAGCGCAGACACTACGTGTCACACACAGGAGGCGCTGTGGGAGCTAGCAGTGTCCTCCTGGTGTTACCAAGTGTGGAGATAAAGAAGTGCCAAGGACAGACCCCCCTCCTCCCACAGGGGGTGGTGGTCACCATCATCACTAACATGCAGTCTGTGGGACTCAACAGCACAGCACTGAAAATTGCACATGTGTTTGACAAAGCCAGAAGGCTGTAAGAGTAATCTcttgtttacagaaatgtgtgAGTTTATATTTTACTATAAAATATTTCAGAAAAACCTTGTATGAAATTTTGATAACACTATTACATAAGTCCATAGGATGTTTTAGGAAATAAATcctccaaaatgtatttaaagtagcAAAGTAAACTCTACTTACTTTCCATTACAACACTTGGCAGGAAAGCCACTAGGTGGAAGCAATTTACCACATTTCTAACAAACAGAAGGCACTGACCTTTGGTATCAGTTTGTTGGCTTAATACAGAGGGTTGTGCGTCTCTACCTTCTCAAAGCTAACACagcaacattttaatatatGTACGTATGCAtttgagagagaaaagaaatttCATACACAATGGAAATAGGTTGTTGCCATTTTAAGCAACATGGTACACCTCAAAAGTCACTTTAAGGCCCACCCTGAACAGATATTTCCTCAGAGCAACATGACATGACAcgtatgctgtacagattgtgAAGCCTCTTAAAGAAAATTTTTGATTTGGGATATttttgctatataaataaaattgacttgacatGC
>XM_039808238.1
GTTGAGCTGAGCGCACTTCTTAGGGGGCTGGGATGGCTCCATAGCTCTGAGATAAATTATGCTCCCTCGCTCTATTTTGTGTGACTCGTGATTTGATTCATTCGGTCTGGCTCGACTATGCAAACAGGAAGCAAGTTGTTAATTGGAGCTCATTAACAAGGGACAGTTATCGCCAACATAAAGCAAGAGAAGCAGCATAACTAACGATGTCACGATTGCTTTTGCCTAATCGTTTTTGTGCCAAATGTACCATACTAACAGCGCGCGGGCTTCCTTTGTTGACACCGCGAGCAGGAGCGCGAGTCAAGCCGCCGCAGTCCGATAAACTGAGTGCTTTTATTCAACAGCAAAGACGACACGTCGGAGGGTCAAACACAGCGTTTTTTAAATACAGGTCAAAGTCCAGGATTTGGCTATGTGGGGTTGGTGTGGGGATTGCTCTAGCTGTCGCTCTGAAATACCGCGCTGACACAGCCAACACTTCCTGTGACGATAAAGTAAAAGAAGCACAGAGGGCTGATCGATACAGCGATGCCATAACCGTGAGCAGGGACCTTGTGGAGCGGATACAGGCTGAGGTCGGGGCTCCAGGGCTGGTGGTTGGGGTCTCTGTGGATGGTGCTCAAGTCTGGAGTGAAGGGATAGGTTATGCTGATTTGGAGAATCGAGTGCCATGCAGCCCAGAAACAGTGATGCGAATCGCCAGCATCAGTAAGCCCctcacatctgcagctgctgcacGACTGTGTGAGGACGGGAAACTAGAACTTGATGTCCCGGTCCAGAAATATGTCCCAGAATTTCCCCAGAAGCAATTTAATGGACAGGATGTCACAATAACCCCCCGTATGCTTCTGTCCCATCTGAGTGGTATACGGCATTATGAGAAAGATGCAAAGAAAGTGAAGGAGGACAAGGAGAAAGCTAAGCGTCTTATCAagccagaaaagaaaaaggatgaaAAGAGCTCATTCGAAAACAAAGATAAACCcacaacagaacagaacacCAAGGGCAAAGAAGCCACTCAGGCTCAGAAGAAGAAAGAGTTTGAGCACGAGGAATACTACTTGAAGGACAACTTTGAAAACGTCACTCAGGCCTTGGACCTTTTCAAGGATGACCCACTCATTTTCAAACCTGGCACCACTTTTCTGTACTCCACCCACGCCTTTACCCTGCTTAGTGCTGCTGTGGAGCGAGCTGCTGGACAGGGCTTCCTGGATGTCATGATGAACATGTTCCGTGAACTGGGAATGCTAAATACTGTGCCTGATGAGAATGACCCTATTATTTACCACCGCTCCAGATTTTATCATCTCAACAAGAGAGGACGTGTTGTGAACTGCCCGTACGTAGACAACTCCTACAAGTGGGCAGGAGGCGGCTTCCTTTCCACTGTGGGTGACCTGCTGCTGTTCGGTAACGCTCTCCTCTACAGCTACCAGGTGGCCCACCTTAAGGACACTGGGGGCTTGCTCCCTGGCTTCCTCAAACCCCAAACTTCCATTGATCTGTGGGCACCAGTTGATAGGACAGAGGCCAGCTGGGATAAGGATGGACTGTATGCCCAAGGCTGGCTGGTAGTGGAGGAACTACAGAAATATGGCCAGTGCAGGAAGCGCAGACACTACGTGTCACACACAGGAGGCGCTGTGGGAGCTAGCAGTGTCCTCCTGGTGTTACCAAGTGTGGAGATAAAGAAGTGCCAAGGACAGACCCCCCTCCTCCCACAGGGGGTGGTGGTCACCATCATCACTAACATGCAGTCTGTGGGACTCAACAGCACAGCACTGAAAATTGCACATGTGTTTGACAAAGCCAGAAGGCTGTAAGAGTAATCTcttgtttacagaaatgtgtgAGTTTATATTTTACTATAAAATATTTCAGAAAAACCTTGTATGAAATTTTGATAACACTATTACATAAGTCCATAGGATGTTTTAGGAAATAAATcctccaaaatgtatttaaagtagcAAAGTAAACTCTACTTACTTTCCATTACAACACTTGGCAGGAAAGCCACTAGGTGGAAGCAATTTACCACATTTCTAACAAACAGAAGGCACTGACCTTTGGTATCAGTTTGTTGGCTTAATACAGAGGGTTGTGCGTCTCTACCTTCTCAAAGCTAACACagcaacattttaatatatGTACGTATGCAtttgagagagaaaagaaatttCATACACAATGGAAATAGGTTGTTGCCATTTTAAGCAACATGGTACACCTCAAAAGTCACTTTAAGGCCCACCCTGAACAGATATTTCCTCAGAGCAACATGACATGACAcgtatgctgtacagattgtgAAGCCTCTTAAAGAAAATTTTTGATTTGGGATATttttgctatataaataaaattgacttgacatGC

Function

symbol description
lactb Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human LACTB (lactamase beta).

NR:

description
unnamed protein product

GO: NA

KEGG:

id description
K17382 LACTB; serine beta-lactamase-like protein LACTB, mitochondrial

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039808237.1 True 2406 mRNA 0.46 6 16963477 16967097
XM_039808238.1 False 2391 mRNA 0.46 6 16963477 16967094

Neighbor

gene id symbol gene type direction distance location
tmem266 tmem266 coding downstream 5060 16928741 ~ 16958417 (-)
isl2a isl2,LOC102787860,LOC102305078,LOC101486127,LOC102207021 coding downstream 45204 16913537 ~ 16918273 (-)
rcn2 rcn2,LOC102789787 coding downstream 117344 16841109 ~ 16846133 (-)
pstpip1a pstpip1,LOC102789492 coding downstream 121063 16835332 ~ 16842414 (-)
si:dkey-24l11.2 LOC104946603 coding downstream 133313 16820314 ~ 16830164 (-)
tpm1 tpm1,LOC103141214,LOC106946143 coding upstream 1496 16968593 ~ 16981538 (-)
tln2b tln2 coding upstream 26826 16993923 ~ 17075416 (-)
foxb1a foxb1,LOC103353681,LOC101061572 coding upstream 395141 17362238 ~ 17365761 (-)
gcnt3 NA coding upstream 439099 17406196 ~ 17407903 (-)
LOC120563560 LOC102312947,LOC102081637 coding upstream 440892 17407989 ~ 17424331 (-)
G85481 etfa non-coding downstream 41335 16920449 ~ 16922142 (-)
G85462 scaper,LOC102788151 non-coding downstream 61156 16901164 ~ 16902321 (-)
G85460 scaper non-coding downstream 63682 16897684 ~ 16899795 (-)
G85453 scaper,LOC102788151,LOC107662441,LOC107688925 non-coding downstream 94314 16867127 ~ 16869163 (-)
G85441 NA non-coding downstream 147330 16811074 ~ 16816147 (-)
LOC120563415 NA non-coding upstream 123008 17090105 ~ 17095763 (-)
G85601 LOC101478969,LOC102214964,LOC102308915,LOC100701437,LOC102780768 non-coding upstream 548806 17515903 ~ 17517167 (-)
G85613 acsbg1,LOC102779547 non-coding upstream 577058 17544155 ~ 17544405 (-)
G85660 NA non-coding upstream 690048 17657145 ~ 17657371 (-)
G85711 NA non-coding upstream 774595 17741692 ~ 17742006 (-)
G85435 NA other downstream 155061 16808056 ~ 16808416 (-)
trnah-gug_10 NA other downstream 198691 16764715 ~ 16764786 (-)
LOC120563869 frmd5,LOC104917831,LOC102299895,LOC106561170 other downstream 199759 16697095 ~ 16763718 (-)
G85321 NA other downstream 522512 16439374 ~ 16440965 (-)
st8sia2 fam174b,st8sia2,LOC100690985,LOC101474125,LOC102798331 other downstream 754291 16188853 ~ 16209186 (-)
fbxl22 fbxl22 other upstream 658914 17626011 ~ 17645520 (-)
ppcdc ppcdc other upstream 894616 17861713 ~ 17877065 (-)
dennd4a dennd4a other upstream 926756 17893853 ~ 17956629 (-)
trnaq-cug_6 NA other upstream 959950 17927047 ~ 17927118 (-)
G85813 rpl4 other upstream 1063911 18031008 ~ 18036276 (-)

Expression


Co-expression Network