ciao2a (fam96a)



Basic Information


Item Value
gene id ciao2a
gene name fam96a
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 3422286 ~ 3436305 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>XM_039808300.1
AACATAGGAAGCGGAAGCGAGACGGAGACGCTCATTGGCTGCGATAAAATCCGCAGCTCTGTAACTTTTATATGTTACGATTTCATGTTTGAGTTTACTCTAGCAGTagtaccatagacagtatataaacagtagTACCAGTAGTACAGTGTATACTGGGTGTATTTCCTGTTGAGATAGAGATCTGCTAACGCTGCGCGCCGCTGTCCTCTAACCGTCAGTTTGTCAGCAGGTTTCCTGCCAAAGTCACAGTCACAGTCGGTCccgtttattattattatggcgTTTCCTAAAACATGGAAGCAGTGTTGAGCCTTGTGTCGTTAACTGCCACCAAGGTTTTACAGTTTTCTGGACTTGTCGACAACGGGAATGTCCTGAAGACTAAAAAGATGGAGGAGAAAGCGTTAGAAGTGTACGACGTGATTCGATCGATCCGGGACCCGGAGAAGCCCAACACCCTGGAGGAGCTGGACGTGGTGACGGAGAAATGCGTGGAGGTCCGCGAGCTCGGAGAAGACGAGtacctcatcatcatcaagttCTCCCCGACCGTCCCTCACTGCTCTCTGGCCACGCTGATCGGTCTGTGTTTACAAGTGAAGCTGCAGAGATGTTTGCCTTTCAAACACAAGttggaaatttacatttcagagggaaccCATTCTACTGAAGAAGATAttaACAAGCAGATCAACGATAAGGAGCGAGTGGCGGCTGCCATGGAGAACCCAAACCTGAGGGAGATCGTGGAGCAGTGTGTCACCGAGCCCGACGACTGACCGGGGGGGCTCCACCTGAAGCAGACACCTcggggtgtgtgtgagagagagagagacagtgtgtgtgtgtgagagagagatactgtgtgtgtgagagagagagagagagagtgtgtgagagagagactgtgtgtgtgtgagagagactgtgtgtgaga

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XM_039808300.1 True 940 mRNA 0.50 5 3422286 3436305

Neighbor


gene id symbol gene type direction distance location
rxfp3.3b LOC101063184,LOC103379777,LOC104955911,LOC100691599 coding downstream 249129 3170771 ~ 3173157 (-)
LOC120564581 LOC104961227 coding downstream 292239 3112306 ~ 3130047 (-)
LOC120564582 NA coding downstream 299695 3117852 ~ 3122591 (-)
LOC120564583 NA coding downstream 314087 3107090 ~ 3108199 (-)
mphosph6 mphosph6 coding downstream 698317 2708516 ~ 2723969 (-)
znf277 znf277 coding upstream 174106 3610411 ~ 3630815 (-)
lrrn3a lrrn3,LOC104963257 coding upstream 363272 3799577 ~ 3825591 (-)
LOC120564132 NA coding upstream 474739 3911044 ~ 3969786 (-)
dus2 dus2 coding upstream 545405 3981710 ~ 4010282 (-)
slc7a10b LOC103357197,LOC102205281 coding upstream 582789 4019094 ~ 4060242 (-)
G82124 NA non-coding downstream 20618 3400930 ~ 3401668 (-)
G82123 NA non-coding downstream 27577 3386615 ~ 3394709 (-)
G82120 NA non-coding downstream 87683 3334352 ~ 3334603 (-)
G81926 NA non-coding downstream 106325 3313061 ~ 3315961 (-)
G81924 NA non-coding downstream 109791 3277905 ~ 3312495 (-)
G82137 NA non-coding upstream 66660 3502965 ~ 3504196 (-)
G82155 NA non-coding upstream 72862 3509167 ~ 3513014 (-)
G82162 NA non-coding upstream 97040 3533345 ~ 3533681 (-)
G82172 NA non-coding upstream 185742 3622047 ~ 3680452 (-)
G82174 NA non-coding upstream 222526 3658831 ~ 3659199 (-)
G82122 NA other downstream 41758 3380027 ~ 3380528 (-)
fem1b fem1b,LOC102786726 other downstream 354365 3056539 ~ 3067921 (-)
G81832 NA other downstream 484296 2937752 ~ 2937990 (-)
LOC120563733 NA other downstream 602873 2752238 ~ 2819413 (-)
G81738 NA other downstream 737046 2684898 ~ 2685240 (-)
G82147 NA other upstream 58086 3494391 ~ 3578384 (-)
LOC120564247 NA other upstream 640073 4076378 ~ 4167786 (-)
G82246 NA other upstream 840515 4276820 ~ 4278359 (-)
urahb NA other upstream 1568087 5004392 ~ 5011941 (-)
faap24 LOC102781697 other upstream 2040919 5477224 ~ 5483533 (-)

Expression



Co-expression Network