LOC120563866 (LOC100700167,LOC108229827,LOC102796952,LOC103368207,LOC106520317)


Basic Information

Item Value
gene id LOC120563866
gene name LOC100700167,LOC108229827,LOC102796952,LOC103368207,LOC106520317
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 14039429 ~ 14046318 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039808313.1
TGGCCCGGACGTGGCACTCGGCAGTAGTCCTGTGTGGAAATCAGAGTAACCGGATCAGTGTAAAACTATCACACGTCGCGCCTATTGTGGCTAATATTAGTACTTCTTTCATAGATTGAAACATCAGCGGCCAGTTATGGGGCTCACCATCTCGTCAATCTTTGAACGGATTTTTGGCAAAAAGCAAATGAGGATTTTGATGGTTGGGCTGGATGCTGCCGGAAAAACAACTATCTTGTACAAATTGAAGCTTGGTGAAATTGTGACCACCATCCCAACCATTGGTTTCAATGTGGAGAcagtagaatataaaaatatcaGCTTCACTGTATGGGATGTTGGTGGCCAGGACAAGATCAGACCCCTCTGGAGACATTACTTCCAGAACACACAGgGCCTCATCTTTGTGGTGGACAGCAATGACCGAGAAAGAGTGGCAGAGTCTGCAGAGGAGCTCACAAAGATGTTGACGGAGGACGAGTTGAAAGACGCCGTTTTGCTGGTGTTTGCTAACAAACAGGACCTTCCCAATGCCTTAACAGTCAGCGAACTCACAGACAAACTTGGCCTACACGCCCTCCGCAACAAAACTTGGCACATTCAGTCAACCTGCGCCACCCAGGGCAGTGGGCTGTATGAAGGACTTGACTGGCTATCCAAAGAGTTGTCCAAGAACTGAAGAAGGATCGGCTGGACAGATGAGAGCGCGAGAGAGAGCGCCTGAACACCACAGGACAGGAGAGAAGGCACAGACATTCAATCCAGAAACATTTGGTCTTCCAGCACCAATGTTCACAAAAAGGACAAGGCTGGTGGACAATATATAATCATCTTTGGGAAATTTTAATATtacatatttctttcttttattatcaatAATATTACCATATTATCTCTTGGTATAGTCTCTATTGTTCTCCTTTTGTACCCAAACTCTTACATGGCAACACTTTGTAATTACACATTCAGTTGCATAATGAGCAAATGCCATATTAGAGAAATGTCATGGAAACAATTAATAATGGGAGTTGTTCTTCAATTTAACACCTTGGCTCCTGTGTAGGCAGCATTTTCAGTAATTGACCACTGGTATAAATTACTCACAACGTTTAGGCTGCCTCAGGCTGTTCATCTCCACAACCCATCGTGGATATTGGACTCCCTCGCAGACCTGACCCTTTGCTCTTCACTGCTATGTCTCATGCAAACTCATTTCTGTAAAGGCCTGTAGCCCGTTGAATGAGATGAATGAGGATTGCAGCGATTTCACAGATAGATCTTGTTAGTAGTGCGGAACCACATGGCCTGCCAGTAAATGGATCCAAAAATGAACCTTGTGCCTTCTGGTCCCTCTTAACACAAATCGGAGTAATCCTTTCCTTATCTCATTCTGAGGTCATGCTCACTCATAAGAtgctttttgtgacttttttttttttttgcttcggaaagacaaaataatgcaactagacatttattttcttctgcAAAGTATGCAGAGGTGCACCAGAACCACACCAGTGTGAGTGTAGATTGCTTCTTTAAAACTTGACTTCACTATTAACCAGGATTTCATCCTCTTTACTCCTCCAGCTtatttcggtaacactttacttgaagttttctacgtaagagtgacatgacactgtcatgagtACATGACGCtcacatgacacatgaaccctaacataacatgtcatgacaaaaccgaatgacacttactaaaaaaagttatgtcataaacgtttatgacttgttcatAATGTTTTATGTTCATGACATGaaacatgtcatgtcactcttatgtagaaaacttcaagtaaagtgtaacccttATTTCTTAATAGCCACCATGAAAACAAggatttaattaaaatgtttacttcTTCTGTCACTCTAAGAGgacatcttttttttgttctaaaaggAGGAAGAAAGCCTTTTTTCAGTGTTGACACACGGCCAATGTCAGTGTGACACAGTAAAGtagcatgtttttgttgtttgagtTTGTTGTACTGTCTGAAAGCAAATACTGTATTATATTCTAATTATTCTACCCCTcttgaaacacaaaaacatacctGCCCATCAGTTTGTTTATGTGTATACATTCCAACCTATGCTTGCAGATGCTGGAGCTGCCACTTTAAAAATTATTCgcaaaaaatattttacaaaaaaagctCTGAATAAAGAcgatgttaaaaacaaa

Function

NR:

description
PREDICTED: ADP-ribosylation factor 5

GO: NA

KEGG:

id description
K07939 ARF4; ADP-ribosylation factor 4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039808313.1 True 2215 mRNA 0.41 6 14039429 14046318

Neighbor

gene id symbol gene type direction distance location
odf3b NA coding downstream 8434 14027898 ~ 14030995 (-)
rabl2 rabl2b,rabl2a,LOC102798136 coding downstream 12365 14022047 ~ 14027064 (-)
arsa arsa,LOC101072550 coding downstream 253678 13781377 ~ 13785751 (-)
LOC120563982 pgc coding downstream 278096 13758290 ~ 13761333 (-)
chkb chkb,LOC100699097,LOC106532760,LOC102775816 coding downstream 299329 13727188 ~ 13740100 (-)
neto2b LOC103368211,LOC104965107 coding upstream 7634 14053952 ~ 14062743 (-)
terb1 terb1 coding upstream 32858 14079176 ~ 14090593 (-)
frmd4a frmd4a,LOC102793558 coding upstream 64148 14110466 ~ 14198123 (-)
LOC120564658 NA coding upstream 198902 14245220 ~ 14251969 (-)
LOC120564497 NA coding upstream 227311 14273629 ~ 14276077 (-)
G84597 NA non-coding downstream 353960 13683824 ~ 13685469 (-)
G84592 NA non-coding downstream 394581 13644417 ~ 13644848 (-)
G84585 NA non-coding downstream 594817 13434739 ~ 13444612 (-)
G84536 NA non-coding downstream 714171 13322182 ~ 13325258 (-)
G84528 NA non-coding downstream 766900 13271252 ~ 13272529 (-)
G84719 NA non-coding upstream 26315 14072633 ~ 14072948 (-)
G84751 LOC103368197 non-coding upstream 191264 14237582 ~ 14238451 (-)
G84752 LOC101063650,LOC106561215,LOC104965117 non-coding upstream 194203 14240521 ~ 14241054 (-)
G84760 NA non-coding upstream 216385 14262703 ~ 14263115 (-)
G84761 NA non-coding upstream 217098 14263416 ~ 14263741 (-)
zgc:77752 NA other downstream 1713 14031104 ~ 14037716 (-)
mafb maf,LOC104941368,LOC104940469,LOC101071510,LOC101484138,LOC103380135,LOC102219741,LOC106520304 other downstream 420643 13573831 ~ 13618786 (-)
LOC120564547 fbxl14,LOC103380143,LOC107388938 other downstream 654224 13325973 ~ 13385205 (-)
prr5a prr5,LOC103371545 other downstream 783336 13246828 ~ 13256093 (-)
G84530 LOC100696427,LOC106963151,LOC107104182,LOC107388919,LOC104956556,LOC102796452,LOC102202152 other downstream 808334 13230617 ~ 13231095 (-)
LOC120564470 NA other upstream 176879 14223197 ~ 14236952 (-)
LOC120563775 cacna2d1,LOC104952157 other upstream 455578 14501896 ~ 14558228 (-)
si:ch1073-390k14.1 LOC103375950 other upstream 915542 14961860 ~ 14967783 (-)
G85014 ppp6r2,LOC103370604 other upstream 1019721 15066039 ~ 15073350 (-)
ttc23 LOC104957250 other upstream 1426616 15472934 ~ 15484145 (-)

Expression


Co-expression Network