LOC120563889


Basic Information

Item Value
gene id LOC120563889
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 10963692 ~ 10971529 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039808372.1
AGGTCTCAGAGTATTGGACAGTAACTGACAAGGCGCGAgggttgtcactttttttccttgACAACTTGGAGCAAAGGTGGCTTTGAGCCGTTTGTGATTCTACGGTTAAAAATAGTTTGGTAACGTTAATGAAAGACATAGGTAcgtttttacacatacaaaagGTGTAGCactctggaaaaaaaatgaagaaaagtaGTCTGGTGTTTAACTCATCTTCTCGAGCAATGAATACTTCAGTTGCTGGAGTTCATCAAGTCAGCCAAAGTTCAAGACACAAGTGGAGCTTCGCAGGTTCACAAACCCGAAGAAGTTCCATCTTGGTCGGTGGCAGCAACAGGAAACGTAACATCCTGGATAGGAACGTCAATCAAGCTCCTAGAAGACCAGTTCGGGTGTTGGACAATGATGGCAACAACGTCACTCCTCTGCCCCTGTATCATGCAGAGCCAGGAGACATGCCTTCCAAACCAGGCAGATTCTTGGATGAAATCTTTTCCAACTCAGAATCAGACCACTTGAAATCAACTTCAAGCTTCAATATGCGCTCTTTTAGCTCATTTATGGGTAGCAGCCTACCATCCAGCCTGTCTACCACAGCGTCAATGACTAAGGGGACTGAGGATAGTGTTCCTAAACTGGACATACCAATAATCCCTCCACCTCCATGCGGACAGAGGAAAAGAGACTATGTGAAACAACATGTAACAGAAGAGATGTTGGATGATGTAGTAGACGTCTGCCTCGCTGAGACAGATACCTTTTCACTGTTTGACATGCCACCCCTCGTCTTTATGTCAGAGGATGCTGAGGATACAAAAGCCATTAAAGAGAGAAACCTTCAATATGCTGAACTCTGCAAGAACAGAATGGGCAACGATAAGTATGTGGAACGATCAATGCAGACATTCAATggagcacttaaagaaaaaCAGATCCAGACCGACAAGATTGTCATGGTGGATGAAGGCACTTTCGCTACTATTTGGGATATCTATGACTCTTTCTGTGACCAAAACAAAAACCCTGAAAGTGGGAAGGCTAACAATCCAGAGACTACCGTGAACACCAGCAAAAGtcaggagaagagaggagagaagagcagCAGCACAGTCAGCACAGTCAGCATAGGCAGCATCATTGGCTCAGAAATGGAAACGTGTCGGAGCAGTTTAAATGCTGAGTCCAACCTAGAGCTGATCATGTTGACAGAGTCATTCCAACACAGCTTATTAGTGATGGAGAGGAGCATCGTGGCAAACCTCTTTCAACCCAAGCTGGCTGCTTATAGGCAGCTTCCCATAATAAAAGACCCTGACAGCATGGTGAAGCCTGGGACCGAGGAGGAGGGTGAGGAGAGCTCTTCATCTCCAACTCTGGAACGTCTCTGGGCTTTCAGCTGCGAGCTCACTAGAGGATGGAACATTACCTGCATGGTCTGGAACAAGGAGAACACGGATCTCCTGGCAGTGGCATACAGTGACTGTGACTCCACCAACCAGAAACCAAGTTTGATCTGCTGCTGGTCCCTCAAAAACCCTACgTGGCCAGAGCGAGTCTTCCACTGTCCTAGTTGTGTGACATCCCTGGATTTCTCAGCCAACAACCCCAACCAGCTGGCTGTGGGGATGTACGATGGCACTATAGCCATCTACAGTGTCCAGAGTCGGAACAACATTCATTGCATTGCCAACAGCAGTGATTGTTTCAAAAGGCACCTGAAACCAGTGTGGCAAGTCAACTGGAGCAAACAAGAGATTACATTGTCAGGGGAGGACAGGGTAGAAGCACTCATTGCTGTGTCGGCAGATGGCAGGATTACCAAGTGGCTCCTCTGCAGCAATGGTCTTGAGTGCATAGATTTAGAAGAAGCAAAAAAGAAGAATCAACAAAAAAGgggaaagaggagaaagaagacCGAACATATGGGTTCAGCACTGACTCCTGGTCTTTGTATTGACTTCTGTCCAACAGATTCCAGTATGTATCTGGTTGGCACATGGGAGGGCCTCATCCAAAAGTGTTCCGTCTCCAACAGTCACAATGTTCTGGAGACTTACCAGAATCACTTTTGCCCTGTGAACAGCATTGAATGGTCTCCATTTAGCCCTGATGTGTTCCTGAGCTGCTCCTCTGACTGGACCATCCAGCTGTGGAAGCAGGAACACCTTACCCCTGTGTTGAGCTTTACATCCACCCAGAGGGCCGTGTATGCCGTCAGGTGGTCCCCAAACTGGTCCACAATATTTGCGGCCATTAATGGACTGCAGGTGGAGATCTGGGACCTGAATTTAAGCATCCTGCACCCAACCATTGTGCACCAGGCCGCACCTGGTGTGACGGTGACATCTGTGCTGTTTGCGAGAGGGACAGACTGTGTCTTGGTAGGGGACAGTGAAGGCCAAGTGACTGTCTACCAGCTCAAAAACCTCAGTGTCGGACAAGGCAAGCAGGTGGACAGCTTGGAAGACATCATTGGCTCTGCAGTTTCCAACTTTTAAACTGTAATGTAAAAGTTTCAATCCATTGCTATTGTAAAAAGATCAAACCGTATACTTGTAACAAGGCAGGTCTTTGTTTATTATTTGAAAACCACTTTACATTTGTTGTATCTTATCTTATGTTAGTTAATTCTGTTACGGTAGTTTAATTATTGCCAGTTATTTTGGAAATTGAAAAAAGTCTAGAAAAGTATCTATAAaagtacaaatgaaataaatgtttcaTTCAATGTTT

Function

GO: NA

KEGG:

id description
K24723 DNAI4, WDR78; dynein intermediate chain 4, axonemal

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039808372.1 True 2736 mRNA 0.46 17 10963692 10971529

Neighbor

gene id symbol gene type direction distance location
snx22 snx22,LOC104929545 coding downstream 2599 10949753 ~ 10961093 (-)
adpgk adpgk coding downstream 16910 10935704 ~ 10946782 (-)
ppib ppib coding downstream 28901 10929968 ~ 10934791 (-)
LOC120564602 NA coding downstream 84044 10717165 ~ 10879648 (-)
LOC120563355 NA coding downstream 258368 10693884 ~ 10705324 (-)
sv2 LOC103366734,LOC105926231 coding upstream 55774 11027303 ~ 11039772 (-)
ireb2 ireb2 coding upstream 91166 11062695 ~ 11081305 (-)
wdr61 wdr61 coding upstream 129520 11101049 ~ 11110308 (-)
sin3aa sin3a coding upstream 175141 11146670 ~ 11169923 (-)
snupn snupn coding upstream 233925 11205454 ~ 11215493 (-)
G83911 NA non-coding downstream 38674 10924503 ~ 10925018 (-)
G83854 NA non-coding downstream 423031 10537831 ~ 10540661 (-)
G83819 NA non-coding downstream 591513 10368773 ~ 10372179 (-)
G83786 pdia3,LOC100304813 non-coding downstream 595810 10361594 ~ 10367882 (-)
G83784 pdia3 non-coding downstream 602285 10359835 ~ 10361407 (-)
G83941 NA non-coding upstream 39333 11010862 ~ 11011238 (-)
G83942 NA non-coding upstream 39769 11011298 ~ 11012402 (-)
G83974 NA non-coding upstream 89538 11061067 ~ 11061304 (-)
G84050 NA non-coding upstream 398870 11370399 ~ 11370649 (-)
G84051 NA non-coding upstream 423019 11394548 ~ 11394883 (-)
oaz2a oaz2,LOC104929548,LOC101470759,LOC102200097,LOC106531198 other downstream 50475 10823286 ~ 10913217 (-)
LOC120564603 NA other downstream 248847 10706219 ~ 10714845 (-)
scamp2 LOC103379909,LOC103364404,LOC104932119 other downstream 301014 10643916 ~ 10662678 (-)
G83826 mfge8,LOC104961859 other downstream 531548 10389244 ~ 10432144 (-)
tdg.2 LOC104948407,LOC103366417 other downstream 783691 10174471 ~ 10180001 (-)
ptpn9a ptpn9 other upstream 202024 11173553 ~ 11260961 (-)
G84083 NA other upstream 916498 11888027 ~ 11888398 (-)
G84123 cat,LOC102293651,LOC102204975,LOC102775586,LOC102293936 other upstream 1169994 12141523 ~ 12144546 (-)
G84530 LOC100696427,LOC106963151,LOC107104182,LOC107388919,LOC104956556,LOC102796452,LOC102202152 other upstream 2259088 13230617 ~ 13231095 (-)
prr5a prr5,LOC103371545 other upstream 2275299 13246828 ~ 13256093 (-)

Expression


Co-expression Network