LOC120563916


Basic Information

Item Value
gene id LOC120563916
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 15004301 ~ 15012816 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039808420.1
CCAGGATACACAACATAAGGCGCTATCTGCTTTTTAATGTATGTGGgggggtcagtgtgtgtgtggccggtGGTATCTATTGTTGCGTCTATTGTTTAGTCCTAAAAGCCTCattttgcctttttgagggggcGTTTAGTGGCTTTTCAGGGCTTTGGGAATCAGAGATGCTGCTTTCATCACAAGTCAGGAGGATATGGAGACTGACAGACAAGCTGCAGAGGATTTGACAACCACAGAAAGAACTGATCCCTGAGGCCTGACTGAGCCCAGGAATGGCCCTCATTGAACTTAAATGGAGATTGTTTCAGGCCAAGGCTCTAGCCTGCTCACTGTTGTTTCTCCTGTGTCTGCACACAGCCACAGGAATGTCAGGGTGGGGTGGATGTTTGGATGGTCAGGATGTATATGCGACAATCAAAGAAAACAGCCACTCAGGAGAAGTTGTTGCTGAACTCATGGCTGAGACCACAATGGATGGGGTTCACTGGAGCCTGGATGGAAAGGATGCTGATTGGTTCTTCTTGGAGGGAAGAAGCATCCGGCTGAAAACATCAGCTGACAAGGTCCTTGACCGAGAGACTCAGGGTCCTGTTCTAATGGCTGACTTGTCATGTTATGAGGATGACACACTTCAGAGTGTGTACAGGATCATGGTGGAGATTCTCAATGAGAATGATAATTCCCCTGTGTTCGCAGAAGACACTGTCCAGTCTCTCATTATCAGTGAGCTAACTCCAGTGAACACTGTGGTGTTAACTGTCCAGGCCACAGATGCAGATAACGACAAGATCATTTACTCCATTGACCAGGCATCAcCTGATGCAGAGTACTTCAAGATTGATCTCCCCAACAGCGGAGAGGTGATCCTGTCCAAGCCTCTTGACTATGAGACCAAAACCCTGCTTACTATCATCATCCATGCTTCAGAAATGAGCACTGCTGAGCGCTTTAATACCAGCAGCAACATCACCATCACCGTCCTGGATGGAGATGACCAGTACCCACAATTCCTGCCCTGCATGCTACTTTTTCAGGATGAGAATAGTCGCATCTGCACCAGCCCTGTGTACACAGTCAAAGTCACAGAGGGGGAAGAGGACATTGTGTTGGACTTCTCTCCTGGTCCCATTCATGCAGTGGATGGAGACAGAGGCCTCAGCTCTGCCCTCAGCTATGCCATTCTCTCAGGAGACGATGATGGGCGTTTCCTGATGGACCCAGAAACGGGGGAGGTGAAACTGATTCGGGGGATTGGAGACAGACTCTCAACTCCAGAGCTGCATCTACAGGTCATGGCATATCAGGACGACGACCCCAGAAAATATTCTGTTGCTACAGTGTTGGTCCGAGTTCTGGCTGTGAACAAGTTTTATCCACAGTTTGACAGGGTTGAATATCAAGGCTTTGTAACTGCTGGAAATAGCCCCGCCTCTCTGGTCTATACCTTTGGCAGCAAAGCGCTGATGTTACATGTACAAGATCAAGACTTTCACCATGGTTTCAATCCCATGATCCACTTCACCTTCAGTCCTACATCCAATCACACAGACATCTACCAGATCACACAGGAGGGTCTTCTGATCGCTAGGACCAATAAACTTCAAGcaaaacagaaacacattcTAGAGGTAACGGCTATAGACCAGGACTCAGGTGATGCTACCTTTGCTACTGTAGTGGTGGAGGTGTTATTTGAAGGACAATCAATCCCTAatagtccactgggagatgaGCGTCCGATAAGCTGCACTGTGGGCAAAGCGTTGTTTCTGAGCATGGTGTTCATGACTGTACTTGGATGTACCCTGTCTATGGCGATATGGCTGAAGAAGAAACACAAAGGAAAGAGGGACCCACTGCAGAGAGGCTGTGTGGCCCAGGGCAAACACCCCAATGTGAGTTTACGGTGGTTCCAACTGGTCAGTCACAATAGCAGCACGACGAACACAGAGGAAGCACCATACAACAATGAAGAATATGGAAACTGCAATCCTTCCTTCAGCTTCTCAGACAATCCTGGCATCTACACCCACCAAAACCTCCCCCCCTGCCGAGGACCCCTTCCACCCAGAACAACCGCTGCACCCGACACCAGCTTCATCCCCAATGAAACTGTGCCTAGCCCTGTGATCTTCAATAATAATGTTTCTACACCAAACAAAATCTCCTCCAGTTCTCACCCAGCCACTGTGAAGATGAGCCCCATACGTATGGTTCAAAATGCTGCTCCACCCGAAGAAAACCCTGGCTCACCAAATGATACATCTCTTGACCATCCTGAGGCACAACCTGACACCAGTCCTAGTCCTGGATCCCCTGGTGACGCTGACACTCCACCGTTCACCTGTCCTGATTTACAAACTACAGAAACAACAACCAATGATGACCCGGCTGACTCTGCTGACCCTGTCACCAGCCCCTCCTCTCAATCCAGCATTCCTTGCAGTCATACCCGTATTGCTTCAGCAGAAATAGACAAACCCTTCCGCAAACCTCGTGTGAAGACCCCCCCAAATGCACCCCTACTGTCCTCACCCGCCCCAGAGCATGTGTCTTTAAAGGCCACACTTGTACACATAGATACGTCTCCTCTTGATACACCTCCAGTAACACCAGAGCGAACATCTATGACTCAAAGCACAGAGGTAGACCAACCCTCCACATCACTGGACCAAACAGAGCAATCAGAGCTGCCGGGTGGGTCTGCAGATGCCGAAAGTACATCTGGGGACAGGAGGCCCTCGACGAACTCGGGAAACGAGCAGGATGGCCGTGGGGCCGGGGGTTTGGATGATGATGGTTTTCTGGGAGATGAAGATGCAGACAAGAACAGTGAGGATGACGATGAGTTAGCGTCAGACGAAGAAGAGCTGCTTAGAGTGATGGCTCGTTGTAATCCCATGTTTATCACATTTACTACTAAGTGAGGTCACTATAATATTGTGTGAACTGAGAGTGACGGGGCAGACGATGAGAAGGTAAGCTGAAGATGGATGACGGAGGCCGGACACGTCATCGAGCAAGAAAGAAACGCTACAGTGTGGTTCTGCTGTACTGTAGGAACTAATGAGGCAAAGACAGAATACATATCTATATGTAAACATAGACATTTACACAATTACAACACATAATGTTGTTCCATTGCGTATACGGTATGACAGGAATGAGTGACCTTGAGTGCAcaatgcagttaaaaaaaaaaaaaaactcttttaaatcaaacttgTCAGTATAaattatgaatggtttcatcAAGGATACAACATGCTCATTCATTGCAAAGTTAGTATAAGTAGAACAGCCTGAATGAATCAGTAATCAAATACATTGTCTGTGAATGTCTACAAATGATAATGagactgtgtgttttttttttttaaaaaaggtaaaTGCACATTAAATGAAAACTGTTGCACTTCTATCTATGGGAGTAAAGTTCCAGGCAGGCAGAATATATGACCACGGTCATCACATAAATCTGTTAAATAGCTGCGGAGtactactgtatgtttaaaacTCTCACATAGTGTACctcttttaaataattgttttgttatGCCTACTCTACAAGCtgcctcagttttttctttcaacatgaGTTAAGTTATTGTCTAAAGTGATTATAAATCAGTTTTGGTGGTGAATAAGGAGAAGTTAAACTGCTTCATTGAAGCTCCTAAAtggcaaattaaaaagaaagctgccaaaaaaaaaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039808420.1 True 3720 mRNA 0.46 16 15004301 15012816

Neighbor

gene id symbol gene type direction distance location
LOC120563915 LOC103375945,LOC104957331,LOC101467291,LOC102310371 coding downstream 13787 14973281 ~ 14990514 (-)
elapor2a kiaa1324l,LOC104944050 coding downstream 85025 14903173 ~ 14919276 (-)
sema3d sema3d coding downstream 209171 14757979 ~ 14795130 (-)
sema3ab sema3a coding downstream 296183 14683447 ~ 14708118 (-)
sema3e sema3e coding downstream 336801 14642838 ~ 14667500 (-)
dnaja2b dnaja2,LOC103370603,LOC100703595,LOC101465466 coding upstream 39034 15051850 ~ 15057130 (-)
lmf2a lmf2,LOC102783784 coding upstream 85810 15098626 ~ 15105742 (-)
c2cd5 NA coding upstream 93255 15106071 ~ 15131264 (-)
b4galnt3b LOC103133797,LOC106915345 coding upstream 126625 15139441 ~ 15158824 (-)
fkbp4 fkbp4 coding upstream 150737 15163553 ~ 15172203 (-)
G84948 NA non-coding downstream 48894 14954128 ~ 14955407 (-)
G84971 NA non-coding downstream 152278 14851720 ~ 14852023 (-)
LOC120564774 NA non-coding downstream 196233 14807411 ~ 14808068 (-)
G84960 NA non-coding downstream 437032 14558458 ~ 14567269 (-)
G84776 NA non-coding downstream 638903 14365192 ~ 14365398 (-)
G85007 NA non-coding upstream 44909 15057725 ~ 15057929 (-)
G85011 ppp6r2 non-coding upstream 49795 15062611 ~ 15063137 (-)
G85027 NA non-coding upstream 165524 15178340 ~ 15179173 (-)
G85084 NA non-coding upstream 349021 15361837 ~ 15363425 (-)
LOC120563611 NA non-coding upstream 440393 15453209 ~ 15455514 (-)
si:ch1073-390k14.1 LOC103375950 other downstream 36518 14961860 ~ 14967783 (-)
LOC120563775 cacna2d1,LOC104952157 other downstream 446073 14501896 ~ 14558228 (-)
LOC120564470 NA other downstream 767349 14223197 ~ 14236952 (-)
zgc:77752 NA other downstream 966585 14031104 ~ 14037716 (-)
mafb maf,LOC104941368,LOC104940469,LOC101071510,LOC101484138,LOC103380135,LOC102219741,LOC106520304 other downstream 1385515 13573831 ~ 13618786 (-)
G85014 ppp6r2,LOC103370604 other upstream 53223 15066039 ~ 15073350 (-)
ttc23 LOC104957250 other upstream 460118 15472934 ~ 15484145 (-)
G85133 mef2a,mef2aa,LOC107553916 other upstream 501962 15514778 ~ 15544082 (-)
chd2 chd2 other upstream 1143168 16155984 ~ 16187336 (-)
st8sia2 fam174b,st8sia2,LOC100690985,LOC101474125,LOC102798331 other upstream 1176037 16188853 ~ 16209186 (-)

Expression


Co-expression Network