tmem60 (LOC104956518,LOC103371546)


Basic Information

Item Value
gene id tmem60
gene name LOC104956518,LOC103371546
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 13244209 ~ 13246174 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039808534.1
ACCTGGAAGAACTGCTCGCGGAGCAAAAACTGGAAGTAGCGgaaagctaaaagctaactaCACTGTACTTGTCGCTGTAATCGAGCTGCTTTGAGTTTAAGATTACATCGTTTGTTTAAAAGTGCTGGCATCTTTCTCGCTGGTGAAGAGTCGGTCTTTCAAACAGCTTGACTCTCCTGGTTAACTTGATCCCACGGTGTGTGTGTCGCTTTGGCTGCAGTCCTCAGTCTCTCTGGGTGGGGGTGATACTGGCTCTGTGCCAGTCCTCTGTAGATGAAGATGTCCCTGGCCCAGCGAGTGCTCCTATCCTGGATCTTCGCCCTGATCTTCCTCATCATGCTGGTCCTCAAGCTGGACTCTAAGATTCACTGGAACTGGTTTATCATTTTCCTCCCTGTCTGGACCTTTGACACCATCCTCATCCTCATGCTGATAGTGAAGATGGCGGGGCGCTGCAAGCCGGACTTTGACCCCAGGGATGGCGAGCAGAGCCTGAAGAGGAGGCTGTGGTACCTGACAGCCCTGCTGCTGAAGCTGGCATTCTGTCTGACACTGTGCTCCCGCCTGCAGAGACTCACCGAAATGTGGGTCAGCGtggtgtgtgtccctctgtggGTGCTGCTGGGTGGGGCGCTAGTGGAGCTGGGGCACAGTGTTTTCCACTACAGAAGGGAATGAACCAGAAGACTACATAAGGGACAATAACTTTTTACGCTCAAGCATCTCTTGCTTGGGATGCACCAATCTGATCCACTTGATTGGCATAAGGGCCCATACTGATCTTAAGTGGATCGCGGCAGACGTGACAGATCCACATTAAATAGATTCTTTGTCAGTGTCATAAAATTCACTGTGTCTGCTATAAGTTGCATTTAAATCACAGCAGGTTGCAGACTCACTGAGTCGGCGTTCCAGTAAGTTCTACACAGTGTGGTTTATAAGGGAGGAGAGCACTAGTATCGGATCAGGAATCGGTATTGGAATTTTCCATAAAGAAAAAGTCGGAAATCTCACAACAATAAGAGCTAATTGTTTGTCACTCTGTTATACAATTGGATCTTTGTTCAAAATGAAGATTTCACATACACCAGTCCACAGTTTGGAATTTTAAGAATACATCCAGCCTTTATTTTTCTGCCTTCTGGTTCGACTACAGGATTTAATTAATGGTGAACGGGGCTAGAGGATAATACGATTTTTATTTGATATAAGCTTGACCTGTACTGCCACTGTGTTTGAGAAATGGAGCTAAgcaaactgagacacacatgATCTGCCTTTGTGATCCACAGTTACTTGCTTCACCTTTTAGAGCGAAATCCcacatatgtacacacaaatacagtaatGTCCAATGGGGGGATCCTTGGGGCACTGAAACTAGTTGTGAATTGACAGTATGAAATTATCCAATCTGCACTATAATGCACTGTGTGCCAATGAGCCATATTATATTTGTGAAATCACTGTTATTTGTCAGTACCCATCCCAGGATGTCCCTCTGCCACTGACACAATTTGAATGCAAATGCATAACTTCCTCTAACCACATACCGACTATTGTGGCACCAAAAGTCATAATCAATCCAACCGTTTACAGCATTAGACCAACATTGTTATCTCTATACTCAAGCCTCTAAAGTAGCTCAAAAGAGAAATACTGAAACTTTTATGATATTAAATGCATGAGACATTAacactaa

Function

NR:

description
transmembrane protein 60-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039808534.1 True 1702 mRNA 0.45 2 13244209 13246174

Neighbor

gene id symbol gene type direction distance location
LOC120564726 LOC103371554,LOC106926584,LOC106963159,LOC101069521 coding downstream 19167 13217937 ~ 13225042 (-)
fam185a fam185a coding downstream 27787 13212809 ~ 13216422 (-)
LOC120563974 lrrc17 coding downstream 34668 13204676 ~ 13209541 (-)
armc10 armc10 coding downstream 51465 13188477 ~ 13192744 (-)
LOC120564344 LOC104940834,LOC103371551 coding downstream 56627 13167318 ~ 13187582 (-)
LOC120564570 LOC104956524,LOC103371543 coding upstream 27596 13273770 ~ 13301322 (-)
LOC120564184 dynlrb2,LOC106573385 coding upstream 140567 13386741 ~ 13387986 (-)
nfat5a nfat5 coding upstream 163399 13409573 ~ 13426661 (-)
LOC120563596 LOC794378,LOC106676715 coding upstream 271509 13517683 ~ 13520737 (-)
si:dkey-234i14.6 LOC104941367,LOC101483377,LOC102290229,LOC105938209 coding upstream 425782 13671956 ~ 13682237 (-)
G84533 NA non-coding downstream 7348 13236651 ~ 13236861 (-)
G84532 NA non-coding downstream 8799 13235173 ~ 13235410 (-)
LOC120563976 NA non-coding downstream 42546 13200943 ~ 13201663 (-)
G84446 NA non-coding downstream 50503 13193269 ~ 13193706 (-)
G84378 NA non-coding downstream 198180 12977962 ~ 13046029 (-)
G84528 NA non-coding upstream 25078 13271252 ~ 13272529 (-)
G84536 NA non-coding upstream 76008 13322182 ~ 13325258 (-)
G84585 NA non-coding upstream 188565 13434739 ~ 13444612 (-)
G84592 NA non-coding upstream 398243 13644417 ~ 13644848 (-)
G84597 NA non-coding upstream 437650 13683824 ~ 13685469 (-)
G84530 LOC100696427,LOC106963151,LOC107104182,LOC107388919,LOC104956556,LOC102796452,LOC102202152 other downstream 13114 13230617 ~ 13231095 (-)
G84123 cat,LOC102293651,LOC102204975,LOC102775586,LOC102293936 other downstream 1099663 12141523 ~ 12144546 (-)
G84083 NA other downstream 1355811 11888027 ~ 11888398 (-)
ptpn9a ptpn9 other downstream 1983248 11173553 ~ 11260961 (-)
oaz2a oaz2,LOC104929548,LOC101470759,LOC102200097,LOC106531198 other downstream 2330992 10823286 ~ 10913217 (-)
prr5a prr5,LOC103371545 other upstream 654 13246828 ~ 13256093 (-)
LOC120564547 fbxl14,LOC103380143,LOC107388938 other upstream 79799 13325973 ~ 13385205 (-)
mafb maf,LOC104941368,LOC104940469,LOC101071510,LOC101484138,LOC103380135,LOC102219741,LOC106520304 other upstream 327657 13573831 ~ 13618786 (-)
zgc:77752 NA other upstream 784930 14031104 ~ 14037716 (-)
LOC120564470 NA other upstream 977023 14223197 ~ 14236952 (-)

Expression


Co-expression Network